Homology
BLAST of mRNA_C-linearis_contig104.909.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 1.360e-9 Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0 Query: 176 GRQDEEGLLLAANCFDNTLRVFHRRFLNSQP 206
GRQDEEGLLLAANCFDNTLRVFHRRFLNS+P
Sbjct: 358 GRQDEEGLLLAANCFDNTLRVFHRRFLNSRP 388
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.909.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5KNQ7_9PHAE | 1.360e-9 | 96.77 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 99..109 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 110..131 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..74 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 132..206 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 75..98 |
| None | No IPR available | TMHMM | TMhelix | | coord: 72..94 |
| None | No IPR available | TMHMM | TMhelix | | coord: 109..131 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig104.909.1 ID=prot_C-linearis_contig104.909.1|Name=mRNA_C-linearis_contig104.909.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=206bp
MLPCHAQRDLATLRCKQPRGTQSVVLCLMRGADGTLGTLPSCGSCSTLLK
AKSLEILGTLQNKQNQGSRCTLSPFLALALTLTLTHLTTFCLWCFLSSPL
PPLPSPFYAMLWYAMVCYAMLLPVVFPFGGVPGPVVRPRRSVLCFFLSLL
LHEHEPTTTTTTTTTTTKKASPPDAGRQDEEGLLLAANCFDNTLRVFHRR
FLNSQP back to top
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