Homology
BLAST of mRNA_C-linearis_contig104.898.1 vs. uniprot
Match: D8LEB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI) HSP 1 Score: 295 bits (755), Expect = 2.950e-90 Identity = 268/546 (49.08%), Postives = 308/546 (56.41%), Query Frame = 0 Query: 21 EPTKEANKGLAWWRPR---RSNLADLSNTSSTSTSILSTSSPPQRQHRSNHHGQDSPSSANRLLFDDPATEGERGAAASGPAARPFETMQKPPQAAGGKQLWTRGSREGIAAPSPEAEDDRNXXXXXXXXXXXXXXXXXAYSNASXXXXXRPQEDLLGSSSGKLKSLKLASTGIANDA--TATATATGDSLPGTPVTSIGGSDASDSTWTNSPGRAKGRRHEXXXXXXXXXXXXXXLRWRSEQGRTLSKPPRPQREARPPAAAGNDTEVDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGAGIAVANAGNAD--GMVCDAAREIEADAW--EGTDDETAVRFNEATERGVVYDILAVDRGCGFCDTSIVPFPVEEGGQVEATRMRDLTSGQSEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMTAHQLQEAAVRLEEAFVPAVKRLRARTSMDVVLDSLFEGKDDAGEFVVRFEVSITRCHPEDIESSPAPALQECARAIREAIREEGVPEESTHEVVFVGRPMWELVSPVLDFSAR 557
E +K+ + G AWWRPR R++LAD+S S+T+TS++S P++ + AAA + FET KP WTRGSR+G APSP+ +D XXXXXXXXXXXXXXXXX XXXXX P++ LLGSSSGKLKSLKLA G A TA A A PGTPV G STW P + R +XXXXXXXXXXXXXX RT AG GA AVA+ G G A + +W EG DDETA EEGGQV A RMR LTSGQ EFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGM A QL++AA RLEE FVPAVKRLRAR+S+DVVLDSLF+G DDAG+FVVRFEV++TRCHPEDI+SSPAPAL+ECA AI+EA+R+EGV ++ THEVVFVGRPMWELVSPVLD SA+
Sbjct: 25 EVSKQNSNGFAWWRPRSILRASLADVS-LSTTNTSVVSXXXXXXXXXXXXXXXXXXXXXXXXXXX--PSSLFDVAAAAQ---QQQFETQLKPKIQH--HSNWTRGSRDGTEAPSPDEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQGLLGSSSGKLKSLKLAPIGSEQLAKHTAAAAAVDSDRPGTPVRGGG----IGSTWCVGPLQV---RRQXXXXXXXXXXXXXXXXXXXXXXRTNHH-------------AG--------------------------------------AVGARFAVASEGGMGTLGEKATAQAGVGEGSWREEGMDDETAA---------------------------------EEGGQVAAERMRALTSGQGEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMNAQQLEDAAARLEEVFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTRCHPEDIDSSPAPALRECASAIKEAVRDEGVNDKDTHEVVFVGRPMWELVSPVLDLSAK 471
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 361..541 e-value: 9.4E-9 score: 36.4 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 336..360 e-value: 9.4E-9 score: 36.4 |
None | No IPR available | GENE3D | 3.90.640.10 | | coord: 412..515 e-value: 9.4E-9 score: 36.4 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig104.898.1 ID=prot_C-linearis_contig104.898.1|Name=mRNA_C-linearis_contig104.898.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=565bp MDLHDQSRHQRSSSVKAAAGEPTKEANKGLAWWRPRRSNLADLSNTSSTS TSILSTSSPPQRQHRSNHHGQDSPSSANRLLFDDPATEGERGAAASGPAA RPFETMQKPPQAAGGKQLWTRGSREGIAAPSPEAEDDRNNTNTGATTTGA PPVLLPAYSNASTARRRRPQEDLLGSSSGKLKSLKLASTGIANDATATAT ATGDSLPGTPVTSIGGSDASDSTWTNSPGRAKGRRHEQQQQQQQQQQQQQ QLRWRSEQGRTLSKPPRPQREARPPAAAGNDTEVDTTNRSTAATHGEKAA VVAQGGAGGSSSSNSSSTNGAGIAVANAGNADGMVCDAAREIEADAWEGT DDETAVRFNEATERGVVYDILAVDRGCGFCDTSIVPFPVEEGGQVEATRM RDLTSGQSEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMTAHQLQE AAVRLEEAFVPAVKRLRARTSMDVVLDSLFEGKDDAGEFVVRFEVSITRC HPEDIESSPAPALQECARAIREAIREEGVPEESTHEVVFVGRPMWELVSP VLDFSARPREEAAC* back to top
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