prot_C-linearis_contig104.882.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig104.882.1 vs. uniprot
Match: A0A6H5K3A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3A1_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.530e-86 Identity = 218/412 (52.91%), Postives = 259/412 (62.86%), Query Frame = 0 Query: 1 PSCRASDLLRVEVLRLDWQRIPSIQNLDIFTRLRELYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVDTQELPHALVIVNMAGNPCCREPTFRHKITCALPDLKVLDGEQVGVMPQLAGVEECKGPMEVSALSPRNDQLGDKRDQTILYVTVQSGGESKIVPFRFSQAGKMTQ-VRQATRFCAEHGLHGDSARESLIDHMEEAIAGPVQAPES-------EETGTEGTTQERIDYHDPPEVDERLHAILHLQKTRARVMQESTASFEH-------------------------------HKKTLLSATRKLVERKTASAHCRSDALEEDIDKILKEARAELQLRRERMSTENRQFATDTREKIERVLAERRRETEAAAEGTGVIVSSPK 373 P RA+DLL+VEVLRLDWQRI SIQNLDIFT LRELY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ED DTQELP ALVI+N++ NPCC +P FR ++ LP L LD + + AGVEECKG +E S L +++ D L+VTV S G+S VPF F Q ++QA+RFC E+GLHGD + +L D MEEAIAG S E +E ++ D D E D RL AI+ LQK RARVM+EST SFE HKK LL+ATRKLVERKTA+AH RS+ALEEDI KIL++AR ELQLRR R+S EN +FATD +EK+ERVLA+RR+E ++ G + SPK Sbjct: 19 PEERAADLLKVEVLRLDWQRIASIQNLDIFTHLRELYLQHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLDLSANVI--EDFDTQELPPALVILNLSSNPCCLDPDFRQRVISCLPGLMALDEVPLVRSSRAAGVEECKGTIEDSQLPLEDEREDDNGGVVTLHVTVHSDGQSHNVPFHFCPTENTAQQLQQASRFCTENGLHGDDDKRNLADQMEEAIAGLKARHTSTGRGISDSERASEEANRKGPDRTDRHETDARLDAIVRLQKARARVMEESTTSFEQVATKHMRHNCLVCVTIFLELNDVVAFLLIMKHKKLLLAATRKLVERKTAAAHSRSNALEEDITKILEDARTELQLRRARVSAENMRFATDMKEKVERVLADRRQEFQSLM-GVRAVAISPK 427
BLAST of mRNA_C-linearis_contig104.882.1 vs. uniprot
Match: D8LE54_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE54_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.180e-59 Identity = 193/380 (50.79%), Postives = 224/380 (58.95%), Query Frame = 0 Query: 1 PSCRASDLLRVEVLRLDWQRIPSIQNLDIFTRLRELYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVDTQELPHALVIVNMAGNPCCREPTFRHKITCALPDLKVLDGEQVGVMPQLAGVEECKGPMEVSALSPRNDQLGDKRDQTILYVTVQSGGESKIVPFRFSQAGKMTQVRQATRFCAEHGLHGDSARESLIDHMEEAIAG-------PVQAPESEETGTEGTTQERIDYHDPPEVDERLHAILHLQKTRARVMQESTASFEHHKKTLLSATRKLVERKTASAHCRSDALEEDIDKILKEARAELQLRRERMSTENRQFATDTREKIERVLAERRRETEAAAEGTGVIVSSPK 373 P RA+DLL+VEVLRLDWQRI SIQNLDIFT LRELY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N CC +P FR ++ LP L Q++QA+RFC E+GLHGD + +L MEEAIAG + E +E ++ D D E D RLHAI+ LQK RARVM+EST SFE HKK LL+ATRKLVE+KTA+AH RSDALEEDI KIL++ARAELQLRR R+S ENR+FATD REK+ERVLA+RR+E+++ G + SPK Sbjct: 19 PEERAADLLKVEVLRLDWQRIASIQNLDIFTHLRELYLQHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLCCLDPDFRQRVISCLPGLM--------------------------------------------------------------------QLQQASRFCTENGLHGDDDKRNLAGQMEEAIAGLKARHISTGRVISDSERDSEEAHRKGPDRTDRHETDARLHAIVRLQKARARVMEESTTSFEQHKKLLLAATRKLVEQKTAAAHGRSDALEEDITKILEDARAELQLRRARVSAENRRFATDMREKVERVLADRRQESQSVV-GARAVAISPK 329 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig104.882.1 ID=prot_C-linearis_contig104.882.1|Name=mRNA_C-linearis_contig104.882.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=378bpback to top |