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Homology
BLAST of mRNA_C-linearis_contig104.869.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI) HSP 1 Score: 963 bits (2489), Expect = 0.000e+0 Identity = 648/991 (65.39%), Postives = 716/991 (72.25%), Query Frame = 0 Query: 1 MSSAGSFVHGSSAGGEDDRKKSKEEQDIANFLSSIDDMTSSSLGEVNLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGMHGDVSELSAIADAFPADWLQGMEGLGM-VGDQSDSSAPPQAEQTQQLPXXXXXXXXXXXXXXXXXXXPRPVAKEHS--NNREPEILGEEPEILDDVEGGYDSGR-----LMSAGGRVASWATRTPASLVGAATAAFRGDARHTAGSPSATTAADAAATATTAGADEPPLDWPGTLDMLGMTQAEAEYGGNPTAAAAAAPASELPSMPPPAAREETFPDFVEIRDPRNVSQFPKPDNALVAKVAAGGRNGGDGQAGEXXXXXXXXXXXXXXXXXXXXQRQVLPAPLRTVEVYLRPDVTWESVADVYMAVMLSRGLVVRQQTEKTVTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSR--APMLSFAGTMARFSGRAGDELYTALRDALVERRMPLSFLATDAEGVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPMRSKPLSAYPLTTRRPPVSSCGVEEAREVMERAREHAYVAGTAGTAGSTLQKRTDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSGSMVVAEGIRSLIRSTWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGPGASGTPVGRDFAARFRLMAKEAVLCYCKAVHAKRVGQLYLTCNHLCFHSSVLGFTSQRVLPLLTVASVSHAPSVLGMDLVTLVDRGREEHSFGIPAVEAGFPQRFRDLLNQCLVLCKADASRRAAEREGAAATDKKPDEEQILARVQRLAKAKQLREARGAXXXXXXXXXXXXXXXXPPVQPVLSPAAGVSVEKEGAVGPDQM------CGVSGGGEGIVEVGGGGAMGMGGEAAGRRNEGGRVGPXXXXXXXXXXXXA--NPGSMMAMGIQAFLEESQKR 973
M+SAGSFVHG+ A E+ ++SKEEQDIA+F+SSIDD S ++ + + D AIADAFPADWL EG+G+ V ++DSSA Q + XXXXXXXXXXXXX ++ + NN E+LGEEP+ILD+V+ GY SG LMSAGGR+ SWA TPASLV AAT AFRGDA H + + +A A + ADE PLDW GTLDM+GM +AE + G T+A A AP SELPS+PPPAARE FPDFVEIRDPRNVSQFPKPDNALVAK AAGG GGDGQAG+ X QR VLPAPLRTVEVYLRPDVTWESV+DVYM VMLSRGLVVR QTEK VTAEKSADAPGDW+TVKLTVGVTRDKLRTLVIQFYAD+R AP+LS AGT+ARFSGR GD+LYTA+R+ LVER+MPLSFLATDAE VSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEER ARL ATLLPQY+A GL PPRP RSKPLSAYPLTTRRPPVS+CGVEEAREVMERAREH V G G + + XXXXXXXXXX GSGS VAEGIRSLIR+TWEDVK+WCDEEAEARVRRKDAQVRDRLLAVE HREAL+A LRDGAGG AS TP GR+FAARFR MAKEAVLC CKAVHAKRVGQLYLTCNH+CFHSSVLGFTSQRVLPLLTVA++SHA SVLGMDL+TLVDRG +EHSFGI AVEAGFP+RF DLL QCLVLCKADASRRAA+REGAAA++++PDEEQILARVQRLAKAKQLR XXXXXXXXXXXXXXXX ++P A + G P++ G S GG G+VE G GGAM XXXXXXXXXXXX GSMMAMGIQAFLEESQKR
Sbjct: 1 MASAGSFVHGTGAS-EERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGK---AIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNETGEVLGEEPQILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKG--TSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGG--GGDGQAGQGAXESGEHAAAAGQERG---QRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREH--VRG----GGDSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGSS---VAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLRXXXXXXXXXXXXXXXXXXXXXXXXD--MAPPAASPHSRPGYPRPEESEFAERDTGASVGG-GVVEGGAGGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKR 968
BLAST of mRNA_C-linearis_contig104.869.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 6.390e-5 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 0 Query: 648 LIRSTWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGPGASGTPVGRDFAARFRLMAKEAVLCYCKAVHAK-----RVGQLYLTCNHLCFHS--SVLGFTSQRVLPLLTVASVSHA 771
++R+ W + C+EEA AR+ RK V RL A+E +R A+V+ L + + V R F RFR+ A EA+L C AV + R G++Y+T HL F +L +Q +P T+ + A
Sbjct: 69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFRV-ADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTIHEIGKA 198
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR004182 | GRAM domain | PFAM | PF02893 | GRAM | coord: 711..771 e-value: 1.1E-5 score: 25.3 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig104.869.1 ID=prot_C-linearis_contig104.869.1|Name=mRNA_C-linearis_contig104.869.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=974bp MSSAGSFVHGSSAGGEDDRKKSKEEQDIANFLSSIDDMTSSSLGEVNLHG GGRSSGGGGRDVFLGSTTPPTQQQQQQQQQQQQGMHGDVSELSAIADAFP ADWLQGMEGLGMVGDQSDSSAPPQAEQTQQLPTTPPPQNAQRNQQQGGQQ QPRPVAKEHSNNREPEILGEEPEILDDVEGGYDSGRLMSAGGRVASWATR TPASLVGAATAAFRGDARHTAGSPSATTAADAAATATTAGADEPPLDWPG TLDMLGMTQAEAEYGGNPTAAAAAAPASELPSMPPPAAREETFPDFVEIR DPRNVSQFPKPDNALVAKVAAGGRNGGDGQAGEGDSGGGGGAVAGQGVGQ GRGQRQVLPAPLRTVEVYLRPDVTWESVADVYMAVMLSRGLVVRQQTEKT VTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSRAPMLSFAGTMA RFSGRAGDELYTALRDALVERRMPLSFLATDAEGVSLDPHYVRDLVGMYA HENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPMRSK PLSAYPLTTRRPPVSSCGVEEAREVMERAREHAYVAGTAGTAGSTLQKRT DEEEDENVFAASGGGDEEGDHSSGGGAEAAAAGSGSGSMVVAEGIRSLIR STWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGP GASGTPVGRDFAARFRLMAKEAVLCYCKAVHAKRVGQLYLTCNHLCFHSS VLGFTSQRVLPLLTVASVSHAPSVLGMDLVTLVDRGREEHSFGIPAVEAG FPQRFRDLLNQCLVLCKADASRRAAEREGAAATDKKPDEEQILARVQRLA KAKQLREARGAAAAASATTASTTTAAAPPVQPVLSPAAGVSVEKEGAVGP DQMCGVSGGGEGIVEVGGGGAMGMGGEAAGRRNEGGRVGPGERSGAAGRG GGANPGSMMAMGIQAFLEESQKR* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR004182 | GRAM |
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