Homology
BLAST of mRNA_C-linearis_contig103.844.1 vs. uniprot
Match:
D7FME6_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME6_ECTSI)
HSP 1 Score: 223 bits (567), Expect = 1.660e-71
Identity = 124/174 (71.26%), Postives = 137/174 (78.74%), Query Frame = 0
Query: 1 MDGWNVDPAG-AQDIYAPDCASRAAEGFYVGALYGTVWGVVGRASSAPILPPTPTTGALKTLSAPNSSSPSPVSRPSGLGARGVSRHLRAFGSGAAGYGMAAASTGGLFGVFVGMVNAGTCACERFRGKKDWFNNTFGGAVAGGSVALLSRHTRSPQMIAAHVAGAAAITSIVA 173
M+ WNV+P YAPDC+SRAAEGFYVGALYG VWGV+GRA+ AP LP TP G LK S + P+P GL RGVSR +RAFG GAAGYG+AAAST G+FGVFVGMVNAGTC CER RGKKDWFNN FGGA AG SVALLSRHTR+PQM+AAHVAGAAAITS+VA
Sbjct: 1 MEDWNVEPPEMTHKDYAPDCSSRAAEGFYVGALYGAVWGVIGRAAHAPTLPSTPAMGELKPPSG-LQAQPAP-----GLETRGVSRQVRAFGRGAAGYGIAAASTAGVFGVFVGMVNAGTCGCERLRGKKDWFNNAFGGAAAGLSVALLSRHTRTPQMLAAHVAGAAAITSVVA 168
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.844.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M D G W N V D P A G A Q D I Y A P D C A S R A A E G F Y V G A L Y G T V W G V V G R A S S A P I L P P T P T T G A L K T L S A P N S S S P S P V S R P S G L G A R G V S R H L R A F G S G A A G Y G M A A A S T G G L F G V F V G M V N A G T C A C E R F R G K K D W F N N T F G G A V A G G S V A L L S R H T R S P Q M I A A H V A G A A A I T S I V A F A T G S P V G S * 20 40 60 80 100 120 140 160 180 Expect = 1.66e-71 / Id = 71.26 Sequence D7FME6_ECTSI
Match Name E-value Identity Description
D7FME6_ECTSI 1.660e-71 71.26 Similar to mitochondrial import inner membrane tra... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M D G W N V D P A G A Q D I Y A P D C A S R A A E G F Y V G A L Y G T V W G V V G R A S S A P I L P P T P T T G A L K T L S A P N S S S P S P V S R P S G L G A R G V S R H L R A F G S G A A G Y G M A A A S T G G L F G V F V G M V N A G T C A C E R F R G K K D W F N N T F G G A V A G G S V A L L S R H T R S P Q M I A A H V A G A A A I T S I V A F A T G S P V G S * 20 40 60 80 100 120 140 160 180 Expect = 6.2E-15 / Score = 55.5 Score = Score = Score = Score = Score = Score = Sequence PF02466 NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PFAM PF02466 Tim17 coord: 19..166 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 178..182 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..157 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 158..177 None No IPR available TMHMM TMhelix coord: 131..148 None No IPR available TMHMM TMhelix coord: 96..118 None No IPR available TMHMM TMhelix coord: 158..180
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig103.844.1 ID=prot_C-linearis_contig103.844.1|Name=mRNA_C-linearis_contig103.844.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=183bp back to top