Homology
BLAST of mRNA_C-linearis_contig103.834.1 vs. uniprot
Match:
D7FME8_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME8_ECTSI)
HSP 1 Score: 125 bits (315), Expect = 1.200e-27
Identity = 118/204 (57.84%), Postives = 131/204 (64.22%), Query Frame = 0
Query: 358 GEGAMDVAAPVTCKPALEALPEPAAHDPADGDPDMSQLSQD-GVELSQASALSISHLADTMEEPLSQATHWLAVFKDSQEAWSLDDVLLSQGEEGAKSGGXXXXXXXXXXXXXXXXXDEAAIDSVEAVALAAEALSPSKQHHHQQAPGVAGAGSALSPGAAGSTPSPRVLSPSSSAA---GNTATELSPMHPPPPLLPGAAGGR 557
G G +VA+P ALE L +PA ++P D + +SQL+Q+ GV+LSQASALSISHLAD EEPLSQAT WLAVFKDSQEAWSLDD+LLS G A+ XXXXXXXXXXXXXXXX DSV AVALAAEALSPS S LS SPR+LSP S A TA ELSPM PP PL GA R
Sbjct: 21 GGGVAEVASPAASTAALETLADPAVNEPQDVE--LSQLTQETGVDLSQASALSISHLADA-EEPLSQATQWLAVFKDSQEAWSLDDILLSPGGAEAEX---XXXXXXXXXXXXXXXXXXXXXDSVGAVALAAEALSPSXXXXXXXXXXXXXGSSTLSL-------SPRLLSPGSGAVTPNNATAAELSPMLPPAPLPSGAVVSR 211
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.834.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
50 100 150 200 250 300 350 400 450 500 550 Expect = 1.20e-27 / Id = 57.84 Sequence D7FME8_ECTSI
Match Name E-value Identity Description
D7FME8_ECTSI 1.200e-27 57.84 Nudix hydrolase domain-containing protein n=1 Tax=... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 400 450 500 550 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence Coil Coil PTHR23355 PTHR23355:SF54 NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_H_REGION
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 255..300 None No IPR available COILS Coil Coil coord: 462..482 None No IPR available PANTHER PTHR23355 RIBONUCLEASE coord: 89..353 None No IPR available PANTHER PTHR23355:SF54 coord: 89..353 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 25..557 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..5 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 17..24 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..24 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 6..16
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig103.834.1 ID=prot_C-linearis_contig103.834.1|Name=mRNA_C-linearis_contig103.834.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=557bp back to top