Homology
BLAST of mRNA_C-linearis_contig102.773.1 vs. uniprot
Match:
A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)
HSP 1 Score: 375 bits (962), Expect = 1.400e-122
Identity = 175/271 (64.58%), Postives = 215/271 (79.34%), Query Frame = 0
Query: 193 LPQMDENSGKQIQLPTGVAITLQNWDVECAEKHIGAIKDSVASHDDLCSFTFMEGEEPVKVLDLAGLENAPGLFEDVSQRCRVAFTNKNRLVFTQAKHSAEVGMPKMRFPMSLCACFQDLWSRRKWSSFYAAINATEVLQVFVQQTLTTSYQTSHCTFNDVFDVLCCPMGGNMYSEKDLIHSTQTLGDHDPGSCMSKWDKTRFMRHALVIRYVDCSSNTVMQTVAMAHPATPASNIFKMAGLIESNITIRTADWLKGKHLPTPLAPAAFDN 463
+PQ+D +S K +Q+ +GVA L+ WD+ECA KH+ AIKDSV +HDDL FT M+GE+ V LDLAGL +APGLF+D++QRCRV FTNK RL+FTQA HSA VG+PKMR SL C D WSRR W+++ A INA+EVLQVFV Q L+TSYQTS CTFND+ + LCCP GG+MYSEKD+ TQTLGDHDPG CMS+WDKTRFMRHALVIRYVDC+S++V++T AMAHP+ PAS +++MA IE+NIT+R DW K K LPT L + FDN
Sbjct: 1 MPQIDPSSRKMLQMTSGVAADLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQANHSAVVGLPKMRCLASLLTCCHDRWSRRTWTAYCATINASEVLQVFVHQELSTSYQTSTCTFNDILEFLCCPTGGSMYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPTALDASRFDN 271
BLAST of mRNA_C-linearis_contig102.773.1 vs. uniprot
Match:
D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI)
HSP 1 Score: 334 bits (856), Expect = 2.220e-105
Identity = 174/311 (55.95%), Postives = 210/311 (67.52%), Query Frame = 0
Query: 155 DPVYLVTDTYPYTYKQFDRQEEDRLLGVDISGLVYKKELPQMDENSGKQIQLPTGVAITLQNWDVECAEKHIGAIKDSVASHDDLCSFTFMEGEEPVKVLDLAGLENAPGLFEDVSQRCRVAFTNKNRLVFTQAKHSAEVGMPKMRFPMSLCACFQDLWSRRKWSSFYAAINATEVLQVFVQQTLTTSYQTSHCTFNDVFDVLCCPMGGNMYSEKDLIHSTQTLGDHDPGSCMSKWDKTRFMRHALVIRYVDCSSNTVMQTVAMAHPATPASNIFKMAGLIESNITIRTADWLKGKHLPTPLAPAAFDNEP 465
D Y TD YP+T QFDR+ E+ LLG +GL K + Q+D +S K +Q+ +GVA L+ WD+ECA KH+ AIKDSV +HDDL FTFM+GE+ V LDLAGLE APG+F++V+QRCRV FTNK RL+FTQ VLQVFVQQ LTTSYQTS CTFND+ D LCCP GG MYSEK++ TQTLGDHDPG CMS+WDKTR MRHALVIRYVDC+SN+V +T AMAHP+ PAS +++MA IE+NITIRTADW+K K LPT L +F+N P
Sbjct: 99 DEAYFFTDVYPFTAAQFDREREN-LLGHH-TGLDPK--MAQIDPSSRKMLQMTSGVAADLEKWDIECARKHLDAIKDSVTTHDDLHQFTFMKGEKVVNALDLAGLEEAPGVFDEVTQRCRVVFTNKKRLIFTQ------------------------------------------VLQVFVQQKLTTSYQTSTCTFNDILDFLCCPTGGTMYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPTALNAGSFNNSP 363
BLAST of mRNA_C-linearis_contig102.773.1 vs. uniprot
Match:
D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)
HSP 1 Score: 308 bits (790), Expect = 2.110e-97
Identity = 146/220 (66.36%), Postives = 176/220 (80.00%), Query Frame = 0
Query: 245 MEGEEPVKVLDLAGLENAPGLFEDVSQRCRVAFTNKNRLVFTQAKHSAEVGMPKMRFPMSLCACFQDLWSRRKWSSFYAAINATEVLQVFVQQTLTTSYQTSHCTFNDVFDVLCCPMGGNMYSEKDLIHSTQTLGDHDPGSCMSKWDKTRFMRHALVIRYVDCSSNTVMQTVAMAHPATPASNIFKMAGLIESNITIRTADWLKGKHLPTPLAPAAFDNE 464
M+GE V VLDLAG+E+APGL++ V+Q+CRV FTN+ RLVFTQA HSAEVG+PKM SL CF D WSRRKW+S+YA+I A+EVLQVFVQQTLTTSYQTS CTF D DVLCCP GG + SEKD+ TQTLGDHDPGSCM++WDKTRFMRHALVIRY+DC+SN+V +T MA +TPAS +++MA I++NITI+ +WL K LP PLA F N+
Sbjct: 1 MKGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQANHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYQTSTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQ 220
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.773.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
50 100 150 200 250 300 350 400 450 500 550 Expect = 1.40e-122 / Id = 64.58 Expect = 2.22e-105 / Id = 55.95 Expect = 2.11e-97 / Id = 66.36 Sequence A0A6H5KA59_9PHAE D7FH32_ECTSI D7FWP8_ECTSI
Match Name E-value Identity Description
A0A6H5KA59_9PHAE 1.400e-122 64.58 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH32_ECTSI 2.220e-105 55.95 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWP8_ECTSI 2.110e-97 66.36 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 400 450 500 550 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..479
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 522..539
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 540..544
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 511..521
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 480..510
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 562..567
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 545..561
None No IPR available TMHMM TMhelix coord: 527..561
None No IPR available TMHMM TMhelix coord: 480..514
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig102.773.1 ID=prot_C-linearis_contig102.773.1|Name=mRNA_C-linearis_contig102.773.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=568bp MPGGERRRSSREGHGTDRTPRSTSSSGRDGGRERTGRNIISNDSVRGSHG GASVQDGGGPNAVGGLFSSRPKDSTGGGVEPGGGDYSRRKTLPDPPPYHD DDDTAVMVEQQLPVPSSSLSVNSRSTAPASTVPERNGGAHRPAAAGAGPG VVLEDPVYLVTDTYPYTYKQFDRQEEDRLLGVDISGLVYKKELPQMDENS GKQIQLPTGVAITLQNWDVECAEKHIGAIKDSVASHDDLCSFTFMEGEEP VKVLDLAGLENAPGLFEDVSQRCRVAFTNKNRLVFTQAKHSAEVGMPKMR FPMSLCACFQDLWSRRKWSSFYAAINATEVLQVFVQQTLTTSYQTSHCTF NDVFDVLCCPMGGNMYSEKDLIHSTQTLGDHDPGSCMSKWDKTRFMRHAL VIRYVDCSSNTVMQTVAMAHPATPASNIFKMAGLIESNITIRTADWLKGK HLPTPLAPAAFDNEPPPPPLFQRSSYKSTIFIFFVVALIYFSINTTAAVI MLLAVMTSFFGSYISSKSRRRVTRRAAGGVMSILLGGAGLPSKTVVSTSG GGLLVFVVVFLRNPPVP* back to top