prot_C-linearis_contig10.671.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.671.1
Unique Nameprot_C-linearis_contig10.671.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length231
Homology
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 2.480e-97
Identity = 167/224 (74.55%), Postives = 179/224 (79.91%), Query Frame = 0
Query:    1 DLEGAQYVTGSMTIAKVAELRYGLEAGAKDLRNIAQQGLKETTQKAMEAVRPDVERLLADFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAKHLYGILPREHADVWRAVASAAVDIALQKHASDKEPASAEAPAPEPIQTPIQTQPGSPGGQEGVPKRPRMSPFEAAAAAHAEAAGDCSVGNSADERREQLEAIADMEVSAFKAAAGIRVWDMKKT 224
            DLEGAQYVTGSMTI K+AELR GLEA   DL+ +AQQGLKETTQKAMEAVRPD E L+ADFTNRWGDGSNILE++EGKRRQPQGFK KQVY TA+DPRAKHLYGI  REHA VWRAVASAAVDIAL KHA DK PASAE PA +P+QT    QP   GG +G  KRPRMS FEAAAA             SADE+REQL AI DMEVSAFKAA GIRVWDM+KT
Sbjct:  253 DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQT----QPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKT 472          
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 2.250e-74
Identity = 133/219 (60.73%), Postives = 162/219 (73.97%), Query Frame = 0
Query:    1 DLEGAQYVTGSMTIAKVAELRYGLEAGAKDLRNIAQQGLKETTQKAMEAVRPDVERLLADFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAKHLYGILPREHADVWRAVASAAVDIALQKHASDKEPASAEAPAPEPIQTPIQTQPGSPGGQEGVPKRPRMSPFEAAAAAHAEAAGDCSVGNSADERREQLEAIADMEVSAFKAAAGIRVW 219
            DLEGA+YVTGSMT+ K+ ELR GLEA   DLR   + G+  +T++AMEAV PD E L  DF NRWGDGS+ILE++EGKRRQPQGFKL+QV  TAVDPRAKHLYGI   EHA VWRAVA+ AVDIA +K +SD    S  APA +P+ TP    P +PGGQ G PKR R+S FEAAAAAHA AA   + G + DE+REQL ++ D+EV++F+   GI +W
Sbjct:  289 DLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTP----PVAPGGQ-GAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIW 502          
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.230e-19
Identity = 57/150 (38.00%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    2 LEGAQYVTGSMTIAKVAELRYGLEAGAKDLRNIAQQGLKETTQKAMEAVRPDVER----LLADFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAKHLYGILPREHADVWRAVASAAVDIALQKHASDKEPASAEAPAPEPIQ 147
            LE ++ VT S+  A +A+LR  L+   + L     Q      +  +   + D+ R    L  D + RW DG+++L + EG RRQP+GFK KQV  TA+DPR+K LYGI   EH+DVW AVA+ AV +A++  A++   ++  + +P P++
Sbjct:  191 LEASKGVTVSLVTAYIADLRDELDEAIERL-----QAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVE 335          
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 7.800e-16
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   60 DFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAKHLYGILPREHADVWRAVASAAVDIALQKHASD 132
            DF NRWGDG NIL +KEG+RRQP GFK  QV  TA+DPR K LYG+   E ADVW+ V   AV IA++   S+
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSE 122          
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 8.380e-16
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   46 AMEAVRPDVERLLADFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAKHLYGILPREHADVWRAVASA-AVDIALQ 127
            A  AV P ++ L  DF NRWGDG NIL +KEG RRQP GFK  QV  TA+DPR K L+G+   E ADVW+ V    AV IA++
Sbjct:  158 ARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVE 240          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCS5_ECTSI2.480e-9774.55Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE2.250e-7460.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVI1_9PHAE1.230e-1938.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI1_9PHAE7.800e-1658.90Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JVE5_9PHAE8.380e-1655.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3579002..3579694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.671.1mRNA_C-linearis_contig10.671.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3579002..3579696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.671.1 ID=prot_C-linearis_contig10.671.1|Name=mRNA_C-linearis_contig10.671.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
DLEGAQYVTGSMTIAKVAELRYGLEAGAKDLRNIAQQGLKETTQKAMEAV
RPDVERLLADFTNRWGDGSNILEHKEGKRRQPQGFKLKQVYETAVDPRAK
HLYGILPREHADVWRAVASAAVDIALQKHASDKEPASAEAPAPEPIQTPI
QTQPGSPGGQEGVPKRPRMSPFEAAAAAHAEAAGDCSVGNSADERREQLE
AIADMEVSAFKAAAGIRVWDMKKTKKAGETV
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