prot_C-linearis_contig10.652.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.652.1
Unique Nameprot_C-linearis_contig10.652.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length66
Homology
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: D7G102_ECTSI (Fatty acid desaturase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G102_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.150e-36
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHLVVCSEMA 63
            MGGIN+QIEHHLFPSMSHMLYAEIAPIV+ AC EFNIPYNAHP+LWSAY SYLKHLVVCSEM+
Sbjct:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 63          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.540e-31
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHLVVCSEMA 63
            MGGIN+QIEHHLFPSMSHMLYAEIAPIV+ AC EFNIPYNAHP+LW+AY SYLKHLVVCSEM+
Sbjct:  629 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPYNAHPTLWTAYASYLKHLVVCSEMS 691          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: A0A835YNM2_9STRA (FA_desaturase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.110e-23
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    2 GGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHL 56
            GGIN+QIEHHLFPSM HM YA +AP+V+  CAEF IPY+AH +LWSAY SYL+ L
Sbjct:    2 GGINYQIEHHLFPSMCHMHYARVAPVVRATCAEFAIPYSAHDTLWSAYASYLRSL 56          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: A0A5E8CJX7_9ZZZZ (Fatty acid desaturase n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CJX7_9ZZZZ)

HSP 1 Score: 79.0 bits (193), Expect = 1.180e-15
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    2 GGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHLVVCSEMAES 65
            GGIN+QIEHHLFPSM H+ Y EIAPIV+K C EFNI Y  H S++ + K  +K L++ ++  +S
Sbjct:  360 GGINYQIEHHLFPSMCHVHYPEIAPIVKKTCQEFNIEYVEHSSVYDSLKDVIKSLIILNKHNKS 423          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: E0ZJ63_PICSI (Sphingolipid desaturase-like protein (Fragment) n=5 Tax=Picea sitchensis TaxID=3332 RepID=E0ZJ63_PICSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.640e-15
Identity = 28/55 (50.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 GGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHL 56
            GG+N+QIEHHLFPS+ H+ Y  I  IV++ C +F++PY+++PS W+A K++  HL
Sbjct:   96 GGLNYQIEHHLFPSVCHLYYPSIHSIVKETCKDFDVPYHSYPSFWTALKAHFLHL 150          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: UPI001BC403FC (Acyl-CoA desaturase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI001BC403FC)

HSP 1 Score: 77.0 bits (188), Expect = 4.450e-15
Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 GGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHL 56
            GG+NFQ+EHHLFP +SH+ Y  IAPIVQ+ CA++N+ YN H +  SA  S++KHL
Sbjct:  295 GGLNFQVEHHLFPRVSHVHYPSIAPIVQQVCADYNVRYNVHQTFPSALFSHIKHL 349          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: A0A4Y6Q468_9DELT (Acyl-CoA desaturase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q468_9DELT)

HSP 1 Score: 76.6 bits (187), Expect = 5.130e-15
Identity = 28/56 (50.00%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHL 56
            +GG+N+Q+EHHLFP +SH+ Y ++A IV++ C EF +PY+A P+LW   +S+ +HL
Sbjct:  256 VGGLNYQVEHHLFPRISHIHYPKLAEIVRETCEEFGVPYHAQPTLWGGIRSHFRHL 311          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: A0A3N5X8P1_9BACT (Acyl-CoA desaturase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5X8P1_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 6.750e-15
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHLVVCSEMAES 65
            +GG+NFQIEHHLFP +SH  Y EI+ IV+ +CAEF + Y A PS++SA K++ +HL      A S
Sbjct:  298 LGGLNFQIEHHLFPRISHAHYPEISKIVEASCAEFGVSYLAFPSIYSATKAHFRHLKAMGRSAAS 362          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: UPI0012E13FAB (acyl-CoA desaturase n=1 Tax=Sphingobacterium endophyticum TaxID=2546448 RepID=UPI0012E13FAB)

HSP 1 Score: 75.9 bits (185), Expect = 1.150e-14
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSY 52
            +GG+NFQ+EHHLFP +SH+ Y E+  IV+  C EF+IPYN +P+ WSA+ S+
Sbjct:  293 LGGLNFQVEHHLFPKISHIHYPELNKIVKSTCREFSIPYNEYPTFWSAFNSH 344          
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Match: UPI001CF70FF3 (acyl-CoA desaturase n=1 Tax=Echinicola sp. SCS 3-6 TaxID=2859768 RepID=UPI001CF70FF3)

HSP 1 Score: 75.9 bits (185), Expect = 1.170e-14
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYKSYLKHLVV 58
            +GG+NFQ+EHHLFP +SH+ Y  I+ I+++AC E+NIPY  HP +  A+ S++KHL V
Sbjct:  294 LGGLNFQVEHHLFPKISHIHYPAISKIIKQACLEYNIPYLEHPKMRLAFVSHVKHLRV 351          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G102_ECTSI3.150e-3688.89Fatty acid desaturase, partial n=1 Tax=Ectocarpus ... [more]
A0A6H5KKY7_9PHAE2.540e-3187.30Cytochrome b5 heme-binding domain-containing prote... [more]
A0A835YNM2_9STRA7.110e-2370.91FA_desaturase domain-containing protein (Fragment)... [more]
A0A5E8CJX7_9ZZZZ1.180e-1554.69Fatty acid desaturase n=1 Tax=seawater metagenome ... [more]
E0ZJ63_PICSI2.640e-1550.91Sphingolipid desaturase-like protein (Fragment) n=... [more]
UPI001BC403FC4.450e-1558.18Acyl-CoA desaturase n=1 Tax=Bacteroidetes bacteriu... [more]
A0A4Y6Q468_9DELT5.130e-1550.00Acyl-CoA desaturase n=2 Tax=Persicimonas caeni Tax... [more]
A0A3N5X8P1_9BACT6.750e-1552.31Acyl-CoA desaturase n=1 Tax=Acidobacteria bacteriu... [more]
UPI0012E13FAB1.150e-1455.77acyl-CoA desaturase n=1 Tax=Sphingobacterium endop... [more]
UPI001CF70FF31.170e-1453.45acyl-CoA desaturase n=1 Tax=Echinicola sp. SCS 3-6... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005804Fatty acid desaturase domainPFAMPF00487FA_desaturasecoord: 1..41
e-value: 1.8E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR19353:SF14DELTA(5) FATTY ACID DESATURASE C-RELATEDcoord: 2..57
NoneNo IPR availablePANTHERPTHR19353FATTY ACID DESATURASE 2coord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3297535..3298065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.652.1mRNA_C-linearis_contig10.652.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3296480..3299414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.652.1 ID=prot_C-linearis_contig10.652.1|Name=mRNA_C-linearis_contig10.652.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=66bp
MGGINFQIEHHLFPSMSHMLYAEIAPIVQKACAEFNIPYNAHPSLWSAYK
SYLKHLVVCSEMAES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005804FA_desaturase_dom