prot_C-linearis_contig10.647.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.647.1
Unique Nameprot_C-linearis_contig10.647.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length391
Homology
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BLAST of mRNA_C-linearis_contig10.647.1 vs. uniprot
Match: A0A6H5KN53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN53_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.130e-98
Identity = 188/345 (54.49%), Postives = 209/345 (60.58%), Query Frame = 0 
Query:   84 DDLVHRNLTWRWPEFCSAAPTRAPPSSPPVRPPSPSRGYGXXXXXXXXSGSAFDCERRRIPAASGKGGNGRCLAAPRASGTGSPLP--KLPKGSYLRHRGTT--VLTVQENLHLVLERLAEAVREQLHSVCSKPAAEEMLRGPKGGEPPERYYGASTRK----------------------------------DFRDYFDAEEEEAARRQQPKSYAHLGALREGSKAKYVFDRTSHTRKGSLAAHLRGDYQPQAEGYRGTNVHAATDWRRLNTSLDRYASSGRDAMTRIADSDRELRKQGVWVRQQTKAREQRRQRANHLLEVYRSELLKEQLREIEVLHLSPRE 390
            D+ +  +LTWRWP  CS   TR                                                         GT   L   K PKGSYLR RGTT  VL VQENLHL LERLAEA++ Q+HSV S+  AEE+LRGP GGEPPERY GAS RK                                  DFR++FD EEE  AR+QQPK+YAHLG LRE  KAKYVFDRTSHTRKGSLAAHLRGDY+P  +GYRGTNVH+  DWRR NT+LDRYA +GR+AM R+A SDR+LR QGVWVRQ TKAREQRRQRANHLLEVYRSELLKEQLREIE LHL+P E
Sbjct:  183 DERLKESLTWRWPSMCSTVDTR---------------------------------------------------------GTNDDLSPQKPPKGSYLRQRGTTLQVLVVQENLHLALERLAEAIQVQVHSVSSRTFAEEILRGPPGGEPPERYCGASMRKGCEVIGLASTACMTMSTAPPPTGVTRTSPTLVMQDFREFFDNEEELVARQQQPKAYAHLGGLREDGKAKYVFDRTSHTRKGSLAAHLRGDYEPHPKGYRGTNVHSVADWRRPNTTLDRYAITGREAMERVAKSDRQLRNQGVWVRQHTKAREQRRQRANHLLEVYRSELLKEQLREIEALHLAPGE 470
[Close]
BLAST of mRNA_C-linearis_contig10.647.1 vs. uniprot
Match: D7FND0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND0_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 3.140e-72
Identity = 135/195 (69.23%), Postives = 154/195 (78.97%), Query Frame = 0 
Query:  197 RLAEAVREQLHSVCSKPAAEEMLRGPKGGEPPE-RYYGASTRKDFRDYFDAEEEEAARRQQPKSYAHLGALREGSKAKYVFDRTSHTRKGSLAAHLRGDYQPQAEGYRGTNVHAATDWRRLNTSLDRYASSGRDAMTRIADSDRELRKQGVWVRQQTKAREQRRQRANHLLEVYRSELLKEQLREIEVLHLSPRE 390
            RL E++  +  S+CS   A          +PP+  Y       DFRD+FD+EEE AAR+QQPK+YAHLG LRE  KAKYVFDRTSHTRKGSLAAHLRGDY+P+ +GYRGTNVH+  DWRRLNT+LDRYA +GR+AM R+A SDRELR QGVWVRQ TKAREQRRQRANHLLEVYRSELLKEQLREIE LHL+P E
Sbjct:  163 RLKESLTWRWPSMCSTADARGANDDLSPQKPPKGSYLRQRGPTDFRDFFDSEEEMAARQQQPKAYAHLGGLREEGKAKYVFDRTSHTRKGSLAAHLRGDYEPRPKGYRGTNVHSVADWRRLNTTLDRYAITGREAMERVAKSDRELRSQGVWVRQHTKAREQRRQRANHLLEVYRSELLKEQLREIEALHLAPGE 357
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN53_9PHAE2.130e-9854.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FND0_ECTSI3.140e-7269.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3274895..3278074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.647.1mRNA_C-linearis_contig10.647.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3274893..3278074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.647.1 ID=prot_C-linearis_contig10.647.1|Name=mRNA_C-linearis_contig10.647.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=391bp
IPGRIAGSTAARADSESSGKHANHIHPKNARFSEFATVSGGDSTERLAGD
ENGTDHGAVGTQETRYVVSEDCAGAAAKLRDDDDDLVHRNLTWRWPEFCS
AAPTRAPPSSPPVRPPSPSRGYGGGDDDDDDSGSAFDCERRRIPAASGKG
GNGRCLAAPRASGTGSPLPKLPKGSYLRHRGTTVLTVQENLHLVLERLAE
AVREQLHSVCSKPAAEEMLRGPKGGEPPERYYGASTRKDFRDYFDAEEEE
AARRQQPKSYAHLGALREGSKAKYVFDRTSHTRKGSLAAHLRGDYQPQAE
GYRGTNVHAATDWRRLNTSLDRYASSGRDAMTRIADSDRELRKQGVWVRQ
QTKAREQRRQRANHLLEVYRSELLKEQLREIEVLHLSPRER
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