prot_C-linearis_contig10.613.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.613.1
Unique Nameprot_C-linearis_contig10.613.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length336
Homology
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BLAST of mRNA_C-linearis_contig10.613.1 vs. uniprot
Match: A0A6H5KRI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI2_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.480e-96
Identity = 182/330 (55.15%), Postives = 212/330 (64.24%), Query Frame = 0 
Query:   16 FDIEPLLTSRTTAVSSQSGFWNDVEAEKGGVHLDEGLKICGPENS-LPRALERVFGWLEEVEAGHQNSASRVDETIIDTGVLAALRAPSSSARQESDKVVSSKAVTKADFCLASRNQPSLAIGIYAHRVVCRPKWLLWSFSHAEYLVVTGTETELLSAWRTYSDFSSLADTAKSLRVRRAVECWHRLE-ALGYHRRTDPSSLRTAARLLNEFLATLLEGLPQEDIAVVADFARQPTTYVVVGVEGVGLRTTTTSRSADAAGQESGERGEPSVSSPQQTAPRRXXXXXXXXXXXG--------FGVAVRHPMKWQMIESSLTPAPRIWVGL 335
            FDIEPLLTSRT   S  SGFW     E  GV L E        NS LPRALERVF WLEEVEAG  + AS VDETII+T  L +LRAP S +R+ESDKV++S AVTKADF +ASR+QPSLAIGIYAHR+VCR +WL WS  + EYLVVTGTETELLSAWR+Y DF SLA T ++LR   A   W RL+ ALG HRRTDP  +RT AR+L+ FL T+LE L   D+ V+ADF R+PTTY+VVGVE             D A  ES ++ EP  S+P++   R                     FG  V HPMKW+  ES L P PR  VGL
Sbjct:   33 FDIEPLLTSRTA--SFHSGFWESENGE--GVFLQEPTGCRQDNNSALPRALERVFCWLEEVEAGC-HGASGVDETIINTDALLSLRAPRSPSRRESDKVITSCAVTKADFSVASRDQPSLAIGIYAHRLVCRSRWLFWSKRYVEYLVVTGTETELLSAWRSYPDFYSLALTVRTLRAHGAANLWDRLDQALGPHRRTDPEGVRTEARVLSRFLTTVLEELVDTDVGVLADFVREPTTYLVVGVE-------------DIASDESEKQDEPLASTPEELEKRDSIRGVERCGRSISCPPADRIFGAKVGHPMKWETRESLLQPTPRSLVGL 344
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRI2_9PHAE1.480e-9655.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2882750..2884482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.613.1mRNA_C-linearis_contig10.613.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2882750..2884482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.613.1 ID=prot_C-linearis_contig10.613.1|Name=mRNA_C-linearis_contig10.613.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=336bp
MPLTTHGRRVVSNLRFDIEPLLTSRTTAVSSQSGFWNDVEAEKGGVHLDE
GLKICGPENSLPRALERVFGWLEEVEAGHQNSASRVDETIIDTGVLAALR
APSSSARQESDKVVSSKAVTKADFCLASRNQPSLAIGIYAHRVVCRPKWL
LWSFSHAEYLVVTGTETELLSAWRTYSDFSSLADTAKSLRVRRAVECWHR
LEALGYHRRTDPSSLRTAARLLNEFLATLLEGLPQEDIAVVADFARQPTT
YVVVGVEGVGLRTTTTSRSADAAGQESGERGEPSVSSPQQTAPRRRSSRS
SSPGGGGFGVAVRHPMKWQMIESSLTPAPRIWVGL*
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