prot_C-linearis_contig10.612.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.612.1
Unique Nameprot_C-linearis_contig10.612.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length338
Homology
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BLAST of mRNA_C-linearis_contig10.612.1 vs. uniprot
Match: D7G8S2_ECTSI (Molecular chaperone, heat shock protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S2_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.880e-27
Identity = 171/333 (51.35%), Postives = 188/333 (56.46%), Query Frame = 0 
Query:    9 MVRCPVCDATGKTGTTLGFGGTVCGLCHGTCFLRSDPNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRHHGRCIKCNFSSLLSKLFLKCINCGGIGYSPEPQYLCPRCNSTGRFKGNNCXXXXXXXXXXXXXXXXXXXXXXXXVKRTFSLILGNVLCPTCNGQGYFTKVGGYTPPRXXXXXXXXXXXXXXXXXXXXX---NGRA-GGRP--RSEPRRRVKPRSIQTDGKRRQTISAGGVPGPQQQPLPLESLSQPRPDDEREGGGGSASEGR--VFNVGVAGPAKAADSKRRQS 333
            M RCPVC+ +GKTGTTLGFGGT C LCHG CFLR++PNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             SS L K   KCIN                   TGR +G  C                        VKRT SL+LGN  CPTC GQGYF   G   P R                        +GRA GGR    SEPR RVK R+   D  RR TIS   +P P+QQ  P + L++   D    GG GS   G   VF +GV  P K+ + KRR+S
Sbjct:    1 MTRCPVCEGSGKTGTTLGFGGTTCALCHGKCFLRTEPNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSSSLYKYLFKCINXXXXXXXXXXXXXXXXXXXTGRLRGYGCTLCSGHGVIHHDVAACANCNGAGEVKRTLSLLLGNQTCPTCQGQGYFAIYGA--PARAMQLPNKGKRGREDEDDDQGGGSEDGRAEGGRVVGGSEPRPRVKQRTTPADKGRRLTIS--DLPRPEQQSPPAKPLARDDTDIRPNGGSGSGDGGEAGVFRLGVTTPVKS-NGKRRRS 328
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8S2_ECTSI3.880e-2751.35Molecular chaperone, heat shock protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.230.20coord: 147..181
e-value: 5.2E-6
score: 28.2
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 134..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2878515..2882091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.612.1mRNA_C-linearis_contig10.612.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2878181..2882713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.612.1 ID=prot_C-linearis_contig10.612.1|Name=mRNA_C-linearis_contig10.612.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=338bp
MLSPATMQMVRCPVCDATGKTGTTLGFGGTVCGLCHGTCFLRSDPNPCPN
CNANGGFPSLFGLRWNTCRLCHGVKYLIDKPLPCPKCRATGQIRGLGGVF
STPCDLCDRQCYIRRHHGRCIKCNFSSLLSKLFLKCINCGGIGYSPEPQY
LCPRCNSTGRFKGNNCMLCGGNGVIHHEVGPCANCNGAGEVKRTFSLILG
NVLCPTCNGQGYFTKVGGYTPPRPQPQTRKRDRDSDGDDDEDSDNGRAGG
RPRSEPRRRVKPRSIQTDGKRRQTISAGGVPGPQQQPLPLESLSQPRPDD
EREGGGGSASEGRVFNVGVAGPAKAADSKRRQSDVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf