prot_C-linearis_contig10.597.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.597.1
Unique Nameprot_C-linearis_contig10.597.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length149
Homology
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 8.590e-60
Identity = 115/140 (82.14%), Postives = 118/140 (84.29%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEG---------KEEQLRELLLKKEDRLSRIEQLRANNAPAGS 131
            MTSLSAMSEGDEEEGGGDHDAREAAD IPAADEIRAVQDDIRGVERK EDAE+ETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQ               +E  L ELLLKKEDR SRIEQLRANNAPA +
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPAAN 140          
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 9.870e-52
Identity = 108/144 (75.00%), Postives = 110/144 (76.39%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIED-------AEEETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGKEEQLRE-------LLLKKEDRLSRIEQLRANNAPAG 130
            MTS SAMSEGDEEEGGGDHDAREAADG PAADEIRAVQ                   AEEETAEVVKKID IEAAIAGGS+YLGMTDPEALLKQLGRKEEQLRRKEGKE            +LLKKEDRLSRIEQLRANNAPAG
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPAG 144          
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 2.640e-51
Identity = 107/147 (72.79%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGKEEQLR------------------ELLLKKEDRLSRIEQLRANNAPA 129
            MT LSAMSEGDEEEGGGDH AREAAD +PAADEIRAVQD+IRGVERKIEDAEEETAEVVKKIDDIEAAIAGG+RYLGMTDPEALLKQL    EQLRR                           ELLLK EDRLSR EQ RANNAPA
Sbjct:    8 MTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL----EQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150          
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 7.080e-28
Identity = 68/96 (70.83%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR 96
            MTSLSAMSEG EEEGGGDH AREAADG PAADEIRAVQ                        D IEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR
Sbjct:   76 MTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR 171          
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.540e-25
Identity = 72/132 (54.55%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIEDAEEETAEVVKKIDDIEAA-IAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGKEEQLRELLLKKEDRLSRIEQLRANNAPAGS 131
            +TSLSA+SEG+EE+GGGDHD REAA G PAADEIRAVQ                      KIDD+EAA IAGGS YLGMTDPEALLK+  R                  +L KE RL  IEQ RANNAPAG+
Sbjct:    8 ITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEKERLGXXXXXXXXXXXXXXXQVLVKEKRLFSIEQRRANNAPAGT 139          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8Q1_ECTSI8.590e-6082.14Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI9.870e-5275.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI2.640e-5172.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM56_ECTSI7.080e-2870.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI6.540e-2554.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..68
NoneNo IPR availableCOILSCoilCoilcoord: 88..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2778180..2779006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.597.1mRNA_C-linearis_contig10.597.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2778180..2779024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.597.1 ID=prot_C-linearis_contig10.597.1|Name=mRNA_C-linearis_contig10.597.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=149bp
MTSLSAMSEGDEEEGGGDHDAREAADGIPAADEIRAVQDDIRGVERKIED
AEEETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEG
KEEQLRELLLKKEDRLSRIEQLRANNAPAGSHRRGGVDPLLRCLPVIF*
back to top