prot_C-linearis_contig10.594.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.594.1
Unique Nameprot_C-linearis_contig10.594.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length66
Homology
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BLAST of mRNA_C-linearis_contig10.594.1 vs. uniprot
Match: D7FUC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC6_ECTSI)

HSP 1 Score: 48.1 bits (113), Expect = 9.650e-5
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    7 SVEGGECCHIKDPRMYKGMVVMLVILRPLMREHLE 41
            S++G  C H+K P M++ + V+LV+LRPLMREHL+
Sbjct:  420 SIQGTACVHLKRPDMHRWLAVLLVLLRPLMREHLQ 454
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUC6_ECTSI9.650e-554.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2740938..2741135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.594.1mRNA_C-linearis_contig10.594.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2740938..2741135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.594.1 ID=prot_C-linearis_contig10.594.1|Name=mRNA_C-linearis_contig10.594.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=66bp
VDGLTDSVEGGECCHIKDPRMYKGMVVMLVILRPLMREHLEDLHRERLEK
NAGGEVQVDELKLCDE
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