prot_C-linearis_contig10.585.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.585.1
Unique Nameprot_C-linearis_contig10.585.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length280
Homology
BLAST of mRNA_C-linearis_contig10.585.1 vs. uniprot
Match: A0A6H5K1I7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I7_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 4.000e-124
Identity = 179/254 (70.47%), Postives = 207/254 (81.50%), Query Frame = 0
Query:   18 MKRKASQILALEARVLETREEVHATARRQAKEKQDFLSGNFVKAWKTGFKALKDSERANRMSDKQLPVRSYSLQDNEVWRMTEIRRWFDSHSTPQAVEGFDPLASVYTTSGNKNEALPALMRTHRVPTPEWAAAENRKALKASEAKRDIANSLHALQDLHFADFEGNLGVQRARTAVLASRLTPPKGWGAGHTHVSGFRSPPWKERPPQEAPRYKCPKLLQERDLFIQAGGGLETFKAKREETRRRATAMKAGS 271
            M+ K + I +LE RVLE RE+VH TARR  KEKQDFLSGNFV+ W+TGF ALK SE+ NRMSDKQLPVRSYSL DNEVWRM EIRRWFDSHS+PQA+ GF+PLAS YT S +KNE LP LMR  RVPTP+WAAAE+RK ++ S  KR+ A  L  LQD HF+DFEGNL VQRAR+AVLASRL PPKGWG  HTHV+GFR+PPWKERPPQEAP YK P + ++RD  +QAGGGLET+ A R++T+RRA AM AGS
Sbjct:    1 MRGKKNNIQSLETRVLEKREQVHKTARRLGKEKQDFLSGNFVRTWRTGFNALKASEQDNRMSDKQLPVRSYSLVDNEVWRMPEIRRWFDSHSSPQAIGGFNPLASGYTISSDKNEVLPPLMRIQRVPTPKWAAAEDRKIIEESRDKREQAMRLRELQDRHFSDFEGNLDVQRARSAVLASRLKPPKGWGPHHTHVAGFRTPPWKERPPQEAPSYKPPHVFRDRDFVVQAGGGLETYNANRKKTKRRAAAMTAGS 254          
BLAST of mRNA_C-linearis_contig10.585.1 vs. uniprot
Match: D7FQG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG9_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 9.680e-115
Identity = 166/236 (70.34%), Postives = 194/236 (82.20%), Query Frame = 0
Query:   18 MKRKASQILALEARVLETREEVHATARRQAKEKQDFLSGNFVKAWKTGFKALKDSERANRMSDKQLPVRSYSLQDNEVWRMTEIRRWFDSHSTPQAVEGFDPLASVYTTSGNKNEALPALMRTHRVPTPEWAAAENRKALKASEAKRDIANSLHALQDLHFADFEGNLGVQRARTAVLASRLTPPKGWGAGHTHVSGFRSPPWKERPPQEAPRYKCPKLLQERDLFIQAGGGLETF 253
            M+RK S IL+LEARVLE RE+V  TARR A+EKQDFLSGNFV+ W+TGF ALK SE+ NRMSDKQLPVRS+SL DNEVW+M EIRRWFDSHS+PQA++GF+PLAS YT S +KN ALP L+R  RVPTP+WAAAE+RK ++ S  KR+ A     LQD HFADFEGNL VQRARTAVLASRL PPKGWG  HTHV+GFR+PPWKERPPQEAPRYK P++ ++RD+F+Q  G    F
Sbjct:    1 MRRKKSNILSLEARVLEKREQVQKTARRLAREKQDFLSGNFVRTWRTGFNALKASEQDNRMSDKQLPVRSHSLVDNEVWQMAEIRRWFDSHSSPQAIDGFNPLASGYTMSSDKNGALPPLLRIQRVPTPKWAAAEDRKIIEKSRDKREQAMRFSELQDRHFADFEGNLDVQRARTAVLASRLKPPKGWGPHHTHVAGFRTPPWKERPPQEAPRYKPPQVFRDRDIFLQVTGPSVAF 236          
BLAST of mRNA_C-linearis_contig10.585.1 vs. uniprot
Match: F0YN21_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN21_AURAN)

HSP 1 Score: 71.2 bits (173), Expect = 3.070e-10
Identity = 59/213 (27.70%), Postives = 90/213 (42.25%), Query Frame = 0
Query:   14 FQRRMKRKASQILALEARVLETREEVHATARRQAKEKQDFLSGNFVKAWKTGFKALKDSERANRMSDKQLPVRSYSLQDNEVWRMTEIRRWFDSHSTPQAVEGFDPLASVYTTSGNKNEALPALMRTHRVPTPEWAAAENRKALKASEAKRDIANSLHALQDLHFADFEGNLGVQR--ARTAVLASRLTPPKGWGAGHTHVSGFRSPPWKERP 224
            F  +M+++  QI      VL+ R  V    + Q K++    +   ++ W+  +   KD ER  R  D+  PVR YS  DN+VW++ E+R WF  ++     +  D                 A  R + VP    A AE R       A   ++     +    F DFEG L  Q+  A   +   +  PP+  G     VSG+R  PW +RP
Sbjct:  566 FLAKMEKREKQIRHQALEVLDKRRAVDDARKLQEKKRNARKTTGKLRGWREQYAIQKDPERLLRCPDRSFPVRLYSKMDNDVWKLPELRSWFQMNAVDPTPDTPD-----------------AHRRGYMVPPATAAPAERRLPTAHKPATAPVSMG-RRMPTPGFNDFEGCLTQQKHNADLKLKERQYYPPQVEG----RVSGYRQAPWLDRP 756          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K1I7_9PHAE4.000e-12470.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG9_ECTSI9.680e-11570.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YN21_AURAN3.070e-1027.70AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2692718..2702853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.585.1mRNA_C-linearis_contig10.585.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2692718..2702853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.585.1 ID=prot_C-linearis_contig10.585.1|Name=mRNA_C-linearis_contig10.585.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=280bp
MTTHNSTQEDTSRFQRRMKRKASQILALEARVLETREEVHATARRQAKEK
QDFLSGNFVKAWKTGFKALKDSERANRMSDKQLPVRSYSLQDNEVWRMTE
IRRWFDSHSTPQAVEGFDPLASVYTTSGNKNEALPALMRTHRVPTPEWAA
AENRKALKASEAKRDIANSLHALQDLHFADFEGNLGVQRARTAVLASRLT
PPKGWGAGHTHVSGFRSPPWKERPPQEAPRYKCPKLLQERDLFIQAGGGL
ETFKAKREETRRRATAMKAGSRTFGGAHD*
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