prot_C-linearis_contig10.582.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.582.1
Unique Nameprot_C-linearis_contig10.582.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length187
Homology
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BLAST of mRNA_C-linearis_contig10.582.1 vs. uniprot
Match: D8LNL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL1_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.110e-65
Identity = 116/185 (62.70%), Postives = 138/185 (74.59%), Query Frame = 0 
Query:    1 MKGSEGQQWVP-RSARAYTAADHAS--VANAREHH-ASLVYEIVFPQPGALGLNLRSYFVQNPAGARLGLPEYGSLVVLDCQNAWLKTVVNSGDLLISINGEKLTGTNFSFADSISLCSRASLPRMFRFARLGDGASSAEIELALAGDI-CAVFDAVDTPQKRLVTAQLHPSAPPFFFLNPPTRQ 180
            ++G   + W     A A  AADHAS  VA A +H    LVYEI FPQ GALGLNLR+Y  + PAGARLGLP YGSL VLD Q  +LK +V  GDLL++ING+KLTG+ FSF D+I++CSRASLPR+ RFAR+  GAS+AEIE A   D+ CA FDA+D PQ+RLVTAQLHPSAP  FFLNPPTR+
Sbjct:   50 VEGPREEPWAAAEGAAAAAAADHASANVAKAGDHDDTGLVYEIAFPQAGALGLNLRTYLAEQPAGARLGLPPYGSLEVLDAQKFYLKAIVEPGDLLVAINGKKLTGSRFSFEDAIAVCSRASLPRVLRFARM-KGASAAEIECAFGADVVCATFDAMDAPQQRLVTAQLHPSAPSHFFLNPPTRR 233
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BLAST of mRNA_C-linearis_contig10.582.1 vs. uniprot
Match: A0A6H5K263_9PHAE (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K263_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.470e-15
Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:   21 DH--ASVANAREHH-ASLVYEIVFPQPGALGLNLRSYFVQNPAGARLGLPEYGSLVVLDCQNAWLK 83
            DH  A+VA A +H  A LVYEI FPQPGALGLNLR+Y  + PAGARLGLP YGSL VLD Q  +LK
Sbjct:  280 DHPSANVAKAGDHDDAGLVYEIAFPQPGALGLNLRTYLAEQPAGARLGLPPYGSLEVLDAQKFYLK 345
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNL1_ECTSI1.110e-6562.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K263_9PHAE1.470e-1568.18AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2670690..2672615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.582.1mRNA_C-linearis_contig10.582.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2669619..2673220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.582.1 ID=prot_C-linearis_contig10.582.1|Name=mRNA_C-linearis_contig10.582.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=187bp
MKGSEGQQWVPRSARAYTAADHASVANAREHHASLVYEIVFPQPGALGLN
LRSYFVQNPAGARLGLPEYGSLVVLDCQNAWLKTVVNSGDLLISINGEKL
TGTNFSFADSISLCSRASLPRMFRFARLGDGASSAEIELALAGDICAVFD
AVDTPQKRLVTAQLHPSAPPFFFLNPPTRQPARASQ*
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