prot_C-linearis_contig10.559.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.559.1
Unique Nameprot_C-linearis_contig10.559.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length270
Homology
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BLAST of mRNA_C-linearis_contig10.559.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.040e-27
Identity = 100/166 (60.24%), Postives = 120/166 (72.29%), Query Frame = 0 
Query:  104 EEGARAVARLREDMRALDELPPPHRPEQGFAAEHRRR-FQHALSVLATARGGPRTEEAVLLACEMVDRHLVRFVGVELEAASALFSILQTESAARRARASSTKLAHERRRNAXXXXXXXXXXXXXXXXXXXXXXQRKRLPVPALVAAAKSLRTLAASAGSIDRSVR 268
            E GA   +RLREDM +L E+ PP RP Q  A + +R  FQHAL+VLA  R GP+ EEA+LLAC  VDRHLVRFVG ELEAA+AL SIL TES+AR A+A + K+A+E           XXXXXXXXXXXXXXXX    LP+  LVAA +SLRTL+ASA +I++SVR
Sbjct:   35 EAGAALASRLREDMASLLEMGPP-RPGQELAPKKQREAFQHALAVLAKVRRGPQLEEALLLACTTVDRHLVRFVGAELEAAAALLSILATESSARCAKAMAAKVAYE-----MAQAGGXXXXXXXXXXXXXXXXXXXXLPLSVLVAAVRSLRTLSASAVAIEKSVR 194
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1S2_9PHAE1.040e-2760.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2398798..2406304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.559.1mRNA_C-linearis_contig10.559.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2398774..2406304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.559.1 ID=prot_C-linearis_contig10.559.1|Name=mRNA_C-linearis_contig10.559.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=270bp
MAPPAARATCLRTQDQPGPPLLELVASEAAIPAAATGKWLLDRDPTCRTL
SCFRQQQKQRLAWPPREDAAGGMSPSLGTQGVGASSSCGWFAGAGSLASS
AVEEEGARAVARLREDMRALDELPPPHRPEQGFAAEHRRRFQHALSVLAT
ARGGPRTEEAVLLACEMVDRHLVRFVGVELEAASALFSILQTESAARRAR
ASSTKLAHERRRNAAAAFGPAPAAAASAASAAEQEGQRKRLPVPALVAAA
KSLRTLAASAGSIDRSVRSA
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