prot_C-linearis_contig10.554.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.554.1
Unique Nameprot_C-linearis_contig10.554.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length345
Homology
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BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 9.870e-61
Identity = 110/167 (65.87%), Postives = 133/167 (79.64%), Query Frame = 0 
Query:   24 QDHRGARKEAGFFASNSLLQEVDDSFRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYTEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAA 190
            +D+ GAR EA FF SNSLLQEVD SFR+HD+LLDF   +C+ E  +++EAV+RQSQ+LG+LAVLRGY  +GE LEGFYSLI L RKL ELCGN+ LEV+AY ASLGELG +ES  AA  F A G L +L GKY++A+PL++RS AIREKVLGP+HL VA  LNN AA
Sbjct:   28 KDNMGARNEADFFVSNSLLQEVDGSFRVHDLLLDFARTRCEKE--IIDEAVERQSQFLGRLAVLRGYEAEGESLEGFYSLIVLWRKLAELCGNKQLEVEAYDASLGELGDDESTGAADAFSAVGRLLQLEGKYDDAEPLYERSQAIREKVLGPEHLDVAQSLNNRAA 192
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 9.660e-49
Identity = 104/181 (57.46%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   19 TDLTLQDHRGARKEAGFFASNSLLQEVDDSFRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYTEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLYKL--------RGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAAL 191
            T L   D+ GAR EA FF SNSLLQEVD SFR+HD+LLDF   +C+ E  +++EAVKRQSQYL +LAVL+ Y  KG+ LEG YSLI L RKL E CGNE +EV+AY ASLGELG +ES  AA  F A G L  L        +GK +EA PL+ R++ I E  LGP+H  VAT LNN A L
Sbjct:  441 TSLEKVDNMGARNEADFFVSNSLLQEVDGSFRVHDLLLDFARTRCEKE--ILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDESAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARL 619
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 3.470e-48
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 0 
Query:    2 RRWVSMDLLA---TATGNKMTDLTLQDHRGARKEAGFFASNSLLQEVDDSFRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYTEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAAL 191
            R ++S+ +LA   +A    +  +  +D  GAR EA FF SNSLLQEVD SFRLHD+LLDF+  +C  E  +++EAVKRQSQYLG+LAVL+ Y  KG+ LEGFYSLI L RKL ELCG + LEV+ Y ASLG+LG + S  A+  F A G L++L G + EA P   R++ I EKVLGP+H  +A  LNN A L
Sbjct:  492 RLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRC--EKKIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCGKQ-LEVEVYHASLGKLGDDVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAEL 681
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.990e-30
Identity = 76/171 (44.44%), Postives = 109/171 (63.74%), Query Frame = 0 
Query:   23 LQDHRGARKEAGFFASNSLLQEVDDS-FRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGY--TEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNES-EDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLA 189
            ++D  G R+EA    S  LLQ V  S +R+HD++L+F+    + E  +VE+A   Q+QYLG++ VL+ Y   E G   +G + L  L R +++L G+  LEV +Y ASLGEL   E+ ED A  +   G L+ ++GK+ EA+PL+ RS AI+EKVLGP+H  VAT LNN A
Sbjct:  300 IEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.160e-29
Identity = 75/173 (43.35%), Postives = 108/173 (62.43%), Query Frame = 0 
Query:   23 LQDHRGARKEAGFFASNSLLQEVDDS-FRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGY--TEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDA-AHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAAL 191
            ++D  G R +A    S  LL  V    +R+HD++L+F     + E   V++A   Q+QYLG+L VL GY   E G   +G + L  L R +++L G+  LEV +Y  SLGEL   E+  A A  +W+ G L+ ++GKY EA+PL++RSLAI+EKVLGP+H  VAT L+N A+L
Sbjct:  559 VEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASL 731
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 6.410e-25
Identity = 70/169 (41.42%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   23 LQDHRGARKEAGFFASNSLLQEVDDS-FRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGY--TEKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDA-AHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNN 187
            ++D  G R +A    S  LL  V    +R+HD++L+F     + E   V++A   Q+QYLG+L VL  Y   E G   +G + L  L R +++L G+  LEV +Y ASL EL   E+ +A A  + + G L+ ++ KY EA+PL++RS AI+EKVLGP+H  VAT LNN
Sbjct:  542 IEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 9.570e-21
Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = 0 
Query:   23 LQDHRGARKEAGFFASNSLLQEVDDS-FRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYT--EKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAAL 191
            ++D  G R EA    S  LL  V    +R+HD++L++   + + +  +V +    Q+ +LG+L VL+ Y   E G   +  + L  L R +++L G+  LEV   S          +E  A  +W+ G L+ ++GKY EA+PL++RS AI+E VLGP+H  V T LNN A L
Sbjct:  534 IEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVALESCEA-------TEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALL 698
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 8.230e-12
Identity = 53/175 (30.29%), Postives = 85/175 (48.57%), Query Frame = 0 
Query:   24 QDHRGARKEAGFFASNSLLQEVDDS-FRLHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYT--EKGEFLEGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELG-----------------------------GNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRS 166
            +D  G R++A    S  LLQ+V    +R+HD++LDF+ IK + +  + ++    Q+Q+LG+L VL+ Y   E G   +G + L  L R +++L G+  LEV +YS SL  L                              G E  D A        L + +G Y++A+PL++RS
Sbjct:  437 EDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQAIQEQILGPEHLDVAMSLINRAQLLRAQGNYDDAEPLYERS 611
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: A0A1F4GZ05_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4GZ05_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 1.430e-7
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 0 
Query:  124 YSASLGE---LGGNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAAL 191
            + A+L E   L GN+        W  G +Y+ +G+Y +A+P+++RSLAI EKVLGP+HL VA  LNNLA L
Sbjct:   46 FEAALNEAQALRGNDLRLGLTQQWL-GYVYQTQGRYADAEPMYRRSLAIYEKVLGPEHLDVADSLNNLAVL 115
[Close]
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Match: I3CCF0_9GAMM (CHAT domain-containing protein n=1 Tax=Beggiatoa alba B18LD TaxID=395493 RepID=I3CCF0_9GAMM)

HSP 1 Score: 63.9 bits (154), Expect = 1.940e-7
Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0 
Query:   98 EGFYSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLYKLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLA 189
            E   +L   GR   EL G+    +  Y  +L     + +ED+A +  + G +YK + +Y EA+  +  SLAIREKVLG +H AVA  LNNLA
Sbjct:   24 EAHQALYQEGRTA-ELAGDTETALARYQQALNLSRADWAEDSASLLQSMGDVYKAKARYAEAEAAYAESLAIREKVLGAEHGAVAVSLNNLA 114
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIY6_9PHAE9.870e-6165.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6Q8_9PHAE9.660e-4957.46NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK0_9PHAE3.470e-4853.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LJA6_9PHAE2.990e-3044.44NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI2.160e-2943.35NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI6.410e-2541.42NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE9.570e-2135.47NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KU94_9PHAE8.230e-1230.29NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1F4GZ05_9PROT1.430e-747.89Uncharacterized protein n=2 Tax=unclassified Betap... [more]
I3CCF0_9GAMM1.940e-740.22CHAT domain-containing protein n=1 Tax=Beggiatoa a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 220..237
score: 60.0
coord: 155..173
score: 45.79
coord: 264..284
score: 37.62
coord: 299..320
score: 29.09
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 266..299
e-value: 16.0
score: 13.2
coord: 182..215
e-value: 0.0055
score: 25.9
coord: 224..257
e-value: 1.3
score: 18.1
coord: 140..173
e-value: 2.4
score: 17.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 182..215
score: 8.644
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 266..299
score: 6.549
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 224..257
score: 7.346
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 140..173
score: 8.85
NoneNo IPR availablePFAMPF13424TPR_12coord: 265..325
e-value: 7.0E-8
score: 32.7
coord: 185..256
e-value: 1.5E-18
score: 66.8
NoneNo IPR availablePFAMPF13374TPR_10coord: 147..178
e-value: 2.6E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 133..250
coord: 220..314
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 220..314
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 133..250
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 264..324
e-value: 9.8E-8
score: 33.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 121..262
e-value: 4.6E-46
score: 159.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 135..297
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 140..299
score: 17.379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2373067..2375848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.554.1mRNA_C-linearis_contig10.554.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2372120..2376467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.554.1 ID=prot_C-linearis_contig10.554.1|Name=mRNA_C-linearis_contig10.554.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=345bp
MRRWVSMDLLATATGNKMTDLTLQDHRGARKEAGFFASNSLLQEVDDSFR
LHDVLLDFIAIKCQGENALVEEAVKRQSQYLGKLAVLRGYTEKGEFLEGF
YSLIDLGRKLDELCGNEVLEVDAYSASLGELGGNESEDAAHVFWAAGTLY
KLRGKYEEAKPLFKRSLAIREKVLGPDHLAVATGLNNLAALFETQSRYEE
AKPLFKRSLAIDENVFGPDHPAVATGLNNLAGLFKTQGKYTEAAPLYERA
TEIWEKALGPDHRTVATVLSNRAVLSYQQGSHDTAVQLLERAFLIQTKKL
GEDHQDTVDTQNFLELVRQRMRAHDETEWGFLGSHARRAKAWRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom