prot_C-linearis_contig10.548.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.548.1
Unique Nameprot_C-linearis_contig10.548.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length250
Homology
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Match: D7FPH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH8_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 5.620e-63
Identity = 108/227 (47.58%), Postives = 145/227 (63.88%), Query Frame = 0
Query:    1 MKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVAEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWDYMDREFEELSVDEAKVCSHNRLQVQGAMDLTRENVAREVAAFRSSEPDGAVRYPLDADSDEEAPVVQNAARTQYVPDPLARIMRDRLSQLGRTSADTSAASADLPLICHPKCIETGCTRGGSFGMVTCAACDGYLHRSCGTLIDEDD 227
            ++ + VSP+    W INDGE  PSHTW  P+SA  M A  ADA +   ++P LFTRK  Y+LFFSGG  GR ++S   WDY DREF E++VD+AKVCSH+R +++GAMD+ RE + R++A    + P G V +P+DADSD         + +           R +  ++GRT+ADTS+AS +LPLI  PKC+E GCT+ G+  MV C  CDG LHRSCG    E+D
Sbjct:  486 LRGISVSPVQLISWYINDGEGMPSHTWICPTSAFAMEAARADAYFTALMSPSLFTRKDAYLLFFSGGQGGRVSSSFAKWDYQDREFSEMTVDQAKVCSHDRQELEGAMDIARERIMRDIAESHRA-PAGVVNFPVDADSDA-------GSDSDVAXXXXXXXARRQWDRIGRTAADTSSASEELPLIICPKCVEPGCTKAGNIAMVACNLCDGDLHRSCGVRGGEED 704          
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Match: D7G8U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U7_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 7.460e-56
Identity = 107/251 (42.63%), Postives = 142/251 (56.57%), Query Frame = 0
Query:    1 MKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVAEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWDYMDREFEELSVDEAKVCSHNRLQVQGAMDLTRENVAREVAAFRSSEPDGAVRYPLDADSDEEAPVVQNAARTQYVPDPLARIMRDRLSQLGRTSADTSAASADLPLICHPKCIETGCTRGGSFGMVTCAACDGYLHRSCGTL----IDEDDDDCTDRQCNKCSSAGKGKGR 247
            ++ + VSPL    W+I D +  PS +W  PSSA  M A  ADA  +    P LF RKH Y+LFF+GG   R  TSH  WD  DREF +++VD+AKVCSH+ L+++GAMD  RE   REVA  R   P G   +    DSD +A    +    +  P P +R +    + +GRTS D S A+  LPLI  PKCIE GCT  G+ GM++C  C G LHR CG       D++ D    ++C  C+   +GK R
Sbjct:  137 LRGIFVSPLQMVTWIIQDQQAVPSSSWICPSSAFPMDAARADAFGIALFCPSLFIRKHAYLLFFAGGQGDRIITSHEDWDTQDREFADMTVDQAKVCSHDHLELEGAMDAARERAVREVANARRYLP-GVANFGFGPDSDSDA---TSDVGARAAPPPRSRRV---WAGIGRTSNDFSEANEPLPLIVSPKCIEPGCTNAGNMGMISCGRCHGDLHRGCGVSGGGNHDDECDSFVGQRCTPCAYPRRGKKR 380          
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Match: D8LFC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC4_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.510e-28
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   89 LSVDEAKVCSHNRLQVQGAMDLTRENVAREVAAFRSSEPDGAVRYPL--DADSDEEAPVVQNAARTQYVPDPLARIMRDRLSQLGRTSADTSAASADLPLICHPKCIETGCTRGGSFGMVTCAACDGYLHRSCGTL-----IDEDDDDCTDRQCNKCSSAGKGKGR 247
            +S   AK CSH+RL ++G MD  RE + R++AA R + P G V +P+  D+D++++A    ++  T+  P P A     R   LGR  ADTSAASA+LP+I  P CIE  C   G+  MV+C  C+G +HR CG L      D + +D    +C+ C++A KGK R
Sbjct:  139 ISPSRAKACSHSRLTLEGEMDAAREKIVRDLAAARGA-PSGVVNFPVGPDSDNEDDAGHRNSSDNTRSTPRPTAL----RHGDLGRAEADTSAASANLPVIYCPACIEPECNMSGNMSMVSCNICNGNIHRFCGVLGGTRNDDGETNDFEGTRCSPCAAANKGKKR 299          
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Match: D7G6N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N0_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.000e-23
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    2 KALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVAEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWDYMDREFEELSVDEAK 95
            + + VSP+    W INDGE  PSHTW  P+SA  M A  ADA +   ++P LFTRK  Y+LFFSGG  GR ++S   WDY DREF E++VD+AK
Sbjct:  219 RGISVSPVQLISWDINDGEGMPSHTWICPTSAFAMEAARADAYFTALISPSLFTRKDAYLLFFSGGQGGRVSSSFEKWDYQDREFSEMTVDQAK 312          
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Match: A0A6H5JMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.230e-12
Identity = 58/156 (37.18%), Postives = 68/156 (43.59%), Query Frame = 0
Query:    6 VSPLLATQWLINDGEYKPSHTWSIPSSASGMVAEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWDYMDREFEELSVDEAKVCSHNRLQVQGAMDLTRENVAREVAAFRSSEPDGAVRYPLDADSDEEAPVVQNAARTQYVPDPLAR 161
            VS L    W I  G   PS T   PS    M    ADA  +  +TP LF RKH Y LFFSGG                 EFE ++ D+AK CSH R+ ++G +D  R   A E  A R S   GAV       SD E    + A      PD  AR
Sbjct:  162 VSILQLMTWYIQPGLGMPSPTCVTPSGGWPMCPMRADAYMIALMTPELFPRKHCYSLFFSGGAG---------------EFEGMTHDQAKECSHKRMLLEGRLDQARAKAALEKVAARLST--GAVPGLCQDSSDSEG---EQAVEQSRRPDQPAR 297          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPH8_ECTSI5.620e-6347.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8U7_ECTSI7.460e-5642.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFC4_ECTSI1.510e-2840.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6N0_ECTSI2.000e-2353.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMG5_9PHAE1.230e-1237.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2231703..2232452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.548.1mRNA_C-linearis_contig10.548.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2231330..2233586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.548.1 ID=prot_C-linearis_contig10.548.1|Name=mRNA_C-linearis_contig10.548.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=250bp
MKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVAEAADAQWVCELT
PRLFTRKHTYVLFFSGGYNGRTTTSHRFWDYMDREFEELSVDEAKVCSHN
RLQVQGAMDLTRENVAREVAAFRSSEPDGAVRYPLDADSDEEAPVVQNAA
RTQYVPDPLARIMRDRLSQLGRTSADTSAASADLPLICHPKCIETGCTRG
GSFGMVTCAACDGYLHRSCGTLIDEDDDDCTDRQCNKCSSAGKGKGRMA*
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