Homology
BLAST of mRNA_C-linearis_contig10.467.1 vs. uniprot
Match:
D7G015_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G015_ECTSI)
HSP 1 Score: 233 bits (593), Expect = 3.850e-74
Identity = 140/222 (63.06%), Postives = 159/222 (71.62%), Query Frame = 0
Query: 14 TTEAF--VPALLSAPRCRGASLPDPR--CASSTSPPARIRWAPTASSTSSTSSSARRMFEVVNFDGDGAEGEGEKGYADVTVREAVEWTMGKDSGFTYIDVRSAEEHDKLATVRGALCIPAFEIVMPEAPAAVEGQXXXXXQGEDDAVFAPDYNYEDLDYTIKPDFVDAMKSRFELDAKLLIGCKTDRSAKACELLVDAGFTQVYNVESQIFMRTRAPQVWS 231
TT+AF VP L S P AS P CA R+RW P ASST A RM DG GE EKGY DVTVREAVEWTM +DS F+YID+RSAEEH+KLATVRGALCIPAF++VMPEA EG Q DD +AP YN+E+ DYT+KPDFVD MK+RF+LDAKLLIGCKT RSAKAC+LLV+AGFT++YNVESQIFMRTRAP+VWS
Sbjct: 12 TTQAFLTVPPLTSPPSTACASNPQLHVPCARHL----RLRW-PRASST------AVRMLG--GEDG----GEEEKGYTDVTVREAVEWTMSRDSEFSYIDIRSAEEHEKLATVRGALCIPAFDLVMPEAEEQGEG---LDDQDGDDTGYAPAYNFEESDYTVKPDFVDTMKARFDLDAKLLIGCKTYRSAKACQLLVEAGFTEIYNVESQIFMRTRAPEVWS 213
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.467.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M V G P L S L F L L A I A T T E A F V P A L L S A P R C R G A S L P D P R C A S S T S P P A R I R W A P T A S S T S S T S S S A R R M F E V V N F D G D G A E G E G E K G Y A D V T V R E A V E W T M G K D S G F T Y I D V R S A E E H D K L A T V R G A L C I P A F E I V M P E A P A A V E G Q E G Q E G Q G E D D A V F A P D Y N Y E D L D Y T I K P D F V D A M K S R F E L D A K L L I G C K T D R S A K A C E L L V D A G F T Q V Y N V E S Q I F M R T R A P Q V W S * 20 40 60 80 100 120 140 160 180 200 220 Expect = 3.85e-74 / Id = 63.06 Sequence D7G015_ECTSI
Match Name E-value Identity Description
D7G015_ECTSI 3.850e-74 63.06 Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M V G P L S L F L L A I A T T E A F V P A L L S A P R C R G A S L P D P R C A S S T S P P A R I R W A P T A S S T S S T S S S A R R M F E V V N F D G D G A E G E G E K G Y A D V T V R E A V E W T M G K D S G F T Y I D V R S A E E H D K L A T V R G A L C I P A F E I V M P E A P A A V E G Q E G Q E G Q G E D D A V F A P D Y N Y E D L D Y T I K P D F V D A M K S R F E L D A K L L I G C K T D R S A K A C E L L V D A G F T Q V Y N V E S Q I F M R T R A P Q V W S * 20 40 60 80 100 120 140 160 180 200 220 Expect = 2.1E-17 / Score = 65.2 Score = Score = Score = Score = Score = Score = Score = Score = 0.834 Score = 10.133 Sequence G3DSA:3.40.250.10 SSF52821 PTHR44542 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_H_REGION SignalP-noTM PS50206
IPR Term IPR Description Source Source Term Source Description Alignment
IPR036873 Rhodanese-like domain superfamily GENE3D 3.40.250.10 coord: 86..226 IPR036873 Rhodanese-like domain superfamily SUPERFAMILY 52821 Rhodanese/Cell cycle control phosphatase coord: 88..217 None No IPR available PANTHER PTHR44542 FAMILY NOT NAMED coord: 85..218 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..30 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 13..30 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 31..231 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..1 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 2..12 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..17 IPR001763 Rhodanese-like domain PROSITE PS50206 RHODANESE_3 coord: 101..219
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.467.1 ID=prot_C-linearis_contig10.467.1|Name=mRNA_C-linearis_contig10.467.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=232bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR036873 Rhodanese-like_dom_sf IPR001763 Rhodanese-like_dom