Homology
BLAST of mRNA_C-linearis_contig10.464.1 vs. uniprot
Match:
A0A6H5JBH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH3_9PHAE)
HSP 1 Score: 89.0 bits (219), Expect = 8.000e-16
Identity = 52/156 (33.33%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 13 CLDALAITLNAAVDQRGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHNA-LRVPRLPVRAVTVSKWPKRVLPCPPNRERPLSHIRR------VLRRGSNRLGWGPRWWPETLQEVRFGDEFNRPVNDLV 161
CL+ALA+ + D +G+W++ST T L+ VCLD+ ++CR+ HV VT T R LWL G +D + R+P VR V++ ++P +VL P ERP + + V + + WWP++++E+RFG FN P++ +
Sbjct: 8 CLEALAVAIRNTSD-KGVWFASTRT--LKTVCLDIYLSCRNRATARACHVEVTVDTPRRLWLRGEEDALSLNSNGPPSRIPPPAVRVVSLEEYPAQVLARAPKEERPTTTLDASGLPADVGQVALDEPKQSREWWPDSVEELRFGSRFNHPLDSSI 160
BLAST of mRNA_C-linearis_contig10.464.1 vs. uniprot
Match:
A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)
HSP 1 Score: 61.2 bits (147), Expect = 1.440e-6
Identity = 57/187 (30.48%), Postives = 76/187 (40.64%), Query Frame = 0
Query: 4 TTGPAGGIACLDALAITLNAAVDQRGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHNALRVPRLPVRAVTVSK---------------------------------WPKRVLPCPPNRERPLSHIRRVLRRGSNRLGWGPRWWPETLQEVRFGDEFNRPV 157
T GP +CL L + LN D + WY TSTKELQ+ L+LC+ACR + T+H+ V A T R L KR RVPRL R T + WP+R+ + PL NRL G W P +L++V G +FN+P+
Sbjct: 128 TLGPTRS-SCLKTLTVALNETCDGKS-WY--TSTKELQLASLELCMACR---HYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPL-----------NRLLDGVSW-PASLRKVCLGHDFNQPI 295
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.464.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
50 100 150 200 250 300 350 Expect = 8.00e-16 / Id = 33.33 Expect = 1.44e-6 / Id = 30.48 Sequence A0A6H5JBH3_9PHAE A0A6H5KPY7_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 Expect = 7.0E-6 / Score = 26.7 Expect = 9.7E-5 / Score = 22.5 Expect = 5.3E-5 / Score = 23.3 Expect = 4.1E-5 / Score = 23.7 Expect = 4.0E-7 / Score = 30.1 Score = Score = Sequence G3DSA:3.80.10.10 PF05725 PTHR32134 SSF52058
IPR Term IPR Description Source Source Term Source Description Alignment
IPR032675 Leucine-rich repeat domain superfamily GENE3D 3.80.10.10 coord: 119..271 IPR008615 FNIP PFAM PF05725 FNIP coord: 285..328 None No IPR available PANTHER PTHR32134 UNCHARACTERIZED coord: 139..369 None No IPR available SUPERFAMILY 52058 L domain-like coord: 120..368
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.464.1 ID=prot_C-linearis_contig10.464.1|Name=mRNA_C-linearis_contig10.464.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=370bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: