prot_C-linearis_contig10.453.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5K282_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K282_9PHAE) HSP 1 Score: 128 bits (321), Expect = 5.960e-35 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHHLG---PSPIRIQAGV 95 M+Y+DV +Y+ +WE A+KKE+DGHDKTGTF+ + +PEGRK + SKWVF+WK NE G+I DFKARMVARGFSQI G+D+HHL PS I+ + Sbjct: 123 MTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHLSSACPSAASIKTVI 220
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5JUR2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR2_9PHAE) HSP 1 Score: 129 bits (324), Expect = 2.840e-34 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 ++YEDVK +YR W+EAIKKEMDGH+KTGTFS I+ +PEGRK VS+KWVF +K +E G+I DFKAR+VARGFSQ+HG DYHH Sbjct: 221 LTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHH 303
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5KPX2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX2_9PHAE) HSP 1 Score: 125 bits (315), Expect = 2.210e-33 Identity = 54/83 (65.06%), Postives = 69/83 (83.13%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 M+Y+DV +Y+ +WE A+KKE+DGHDKTGTF+ + +PEGRK + SKWVF+WK NE G+I DFKARMVARGFSQI G+D+HH Sbjct: 109 MTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHH 191
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5LAZ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAZ3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 4.050e-33 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH---LGPSPIRIQAGV 95 M+Y+DV +Y+ +WE A+KKE+D HDKTGTF+ + +P+GRK + SKWVF+WK NE G+I DFKARMVARGFS+I G+D+HH PS I+ + Sbjct: 1 MTYKDVMCSKYKVFWEAAMKKEIDDHDKTGTFTKVKELPDGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSEIPGIDFHHSSSASPSAASIKTVI 98
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 129 bits (324), Expect = 9.730e-33 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 ++YEDVK +YR W+EAIKKEMDGH+KTGTFS I+ +PEGRK VS+KWVF +K +E G+I DFKAR+VARGFSQ+HG DYHH Sbjct: 737 LTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHH 819
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 129 bits (324), Expect = 9.830e-33 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 ++YEDVK +YR W+EAIKKEMDGH+KTGTFS I+ +PEGRK VS+KWVF +K +E G+I DFKAR+VARGFSQ+HG DYHH Sbjct: 1290 LTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHH 1372
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5JNP9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP9_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.170e-32 Identity = 54/83 (65.06%), Postives = 69/83 (83.13%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 M+Y+DV + + +WE A+KKE+DGHDKTGTF+ + +PEGRK + SKWVF+WK NE G+I DFKARMVARGFSQIHG+D+HH Sbjct: 109 MTYKDVMCSKCKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIHGIDFHH 191
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5K236_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K236_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.250e-32 Identity = 52/83 (62.65%), Postives = 68/83 (81.93%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 M+Y+DV +Y+ +WE A+KKE+DGHDKTGTF+ + +PEGRK + SKWVF+WK E G+I DFKARMVARGFS+I G+D+HH Sbjct: 17 MTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTKEKGLIVDFKARMVARGFSRIPGIDFHH 99
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5KEA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA7_9PHAE) HSP 1 Score: 124 bits (310), Expect = 4.950e-32 Identity = 52/82 (63.41%), Postives = 69/82 (84.15%), Query Frame = 0 Query: 2 SYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 +Y+DV+ +Y+ +WE A++KE+DGHDKTGTF+ + +PEGRK + SKWVF+WK NE G+I DFKARMVARGFSQI G+D+HH Sbjct: 75 TYKDVRCSKYKVFWEAAMRKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHH 156
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Match: A0A6H5K088_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K088_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.160e-31 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 0 Query: 1 MSYEDVKRPRYRTWWEEAIKKEMDGHDKTGTFSAIDSVPEGRKPVSSKWVFAWKINELGVIADFKARMVARGFSQIHGVDYHH 83 M+Y+DV +Y+ +WE A+KKE+DGHDKTGTF+ + +PEGRK + SKWVF+WK NE G+I DFKAR VARGF Q+ G+D+HH Sbjct: 56 MTYKDVMCSKYKIFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARTVARGFFQVPGIDFHH 138 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig10.453.1 ID=prot_C-linearis_contig10.453.1|Name=mRNA_C-linearis_contig10.453.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=97bpback to top |