Homology
BLAST of mRNA_C-linearis_contig10.445.1 vs. uniprot
Match:
A0A6H5KGC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC2_9PHAE)
HSP 1 Score: 108 bits (269), Expect = 5.240e-20
Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 0
Query: 814 TEMTGDQLLCALDMFLTPEQRRRKETIKKDQARKRKAIDAANKLLCDMAQRNAWGHSASRAATGPSADSSSGEGGDRTAKRPRSMASIFDQPARAPGA 911
T MT DQLL A+DMFLT +QR+RKE IK+DQA+KRK IDAANKLL D AQR++W HSA + D +S EG DR AKRPRSMASIFD+P R GA
Sbjct: 438 TAMTDDQLLSAVDMFLTTDQRKRKEAIKRDQAKKRKDIDAANKLLRDRAQRDSWAHSAGSFSP---VDLTSSEG-DRAAKRPRSMASIFDKPVRPTGA 531
BLAST of mRNA_C-linearis_contig10.445.1 vs. uniprot
Match:
D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)
HSP 1 Score: 83.6 bits (205), Expect = 2.500e-12
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 0
Query: 814 TEMTGDQLLCALDMFLTPEQRRRKETIKKDQARKRKAIDAANKLLCDMAQRNAWGHSA 871
T MT DQLL A+DMFLT EQR+RKE IK+DQA+KRK IDAANKLL D AQR++W HSA
Sbjct: 687 TAMTDDQLLSAVDMFLTTEQRKRKEAIKRDQAKKRKDIDAANKLLSDRAQRDSWAHSA 744
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.445.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
100 200 300 400 500 600 700 800 900 1000 1100 1200 Expect = 5.24e-20 / Id = 65.31 Expect = 2.50e-12 / Id = 74.14 Sequence A0A6H5KGC2_9PHAE D7FH97_ECTSI
Match Name E-value Identity Description
A0A6H5KGC2_9PHAE 5.240e-20 65.31 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7FH97_ECTSI 2.500e-12 74.14 Similar to chromosome fragility associated gene 1 ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
100 200 300 400 500 600 700 800 900 1000 1100 1200 Score = Sequence Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 519..539
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.445.1 ID=prot_C-linearis_contig10.445.1|Name=mRNA_C-linearis_contig10.445.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1206bp back to top