prot_C-linearis_contig1.122.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig1.122.1
Unique Nameprot_C-linearis_contig1.122.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length231
Homology
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 9.690e-115
Identity = 175/233 (75.11%), Postives = 189/233 (81.12%), Query Frame = 0
Query:    1 MARLLFFVTAISPFVGQAFVQHAMPRV---RAVPSAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQINTRNKEPLSFEVKLVKVR 230
            M RL F + AI+  V  AFV    P +   RA    M    +DEG+SRGE +R VAAACVTGS AWS+    VSAK PAPVM+LPDDD  KPA RSGGEGSIPPFTVLPSGVQITDIV G+G  ADT KGVTLKWV+RRSNGYYVSSS EG GEPFIYRVGD KRAIKGLDDGIRGMK+GGTRRIVVPP+LGYVEGCKDG PGPIP+GLGPKQQINTRNKEPL+FEVKL KVR
Sbjct:    2 MDRLSFSIFAIAQLVTHAFVPATFPHLGVRRATGLRMCSSPADEGMSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPDDDSAKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.200e-46
Identity = 81/139 (58.27%), Postives = 101/139 (72.66%), Query Frame = 0
Query:   93 SGGEG-SIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQINTRNKEPLSFEVKLVKVR 230
            SG E  ++P F  LPSGV+ITDI VGNG        V+L+WVLRRSNGY+V SS     +PFIYRVGD ++AIKG D+GIRGMK GG RR++VPP+LGYV+G  D KPGP+P G GP++Q+  R  EP  FEV++  VR
Sbjct:  210 SGDENPNLPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVR 348          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.310e-38
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 0
Query:   16 GQAFVQHAMPRVRAVP--SAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 212
            G  F   +  R R  P  +A   H+    ++R          C + + A+S          PAP   + ++ P  P +    +        LPSGV   D+  G+GD  +  K V ++WVL+RSNGY+V SS+  +G PFI+ VGD K A+ G+D+GIRGM+ GG RRI+VPP L YVEG +DGKPGPIP G GPKQ++
Sbjct:   33 GNRFDSSSANRPRGAPKTTAAAAHADRRNVARDIIAGGAGIFCTSAALAFS----------PAPSFAMYENAPAVPEESQQIQ--------LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRM 213          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 137 bits (346), Expect = 2.740e-36
Identity = 73/136 (53.68%), Postives = 87/136 (63.97%), Query Frame = 0
Query:  102 FTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQIN----TRNKEP---LSFEVKLVKVR 230
            +  L SGV   DI  G+G+       V L+WVLRRSNGY+V SSA  +  PFI+ VGD K AI GLD  +RGMK GGTRRI++PP+L YV G  DGKPGPIP G GP+QQ+      R   P   +  EVKL KVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A1Z5JCU4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCU4_FISSO)

HSP 1 Score: 134 bits (336), Expect = 7.600e-36
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0
Query:  102 FTVLPSGVQITDIVVGNG-DAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEPLSF---EVKLVKVR 230
            +  LPSGV   D+  G+G + A+    V L+WVLRRSNGY+V SS   +G PFI+ VGD K AI+G+D+G++GMK GG RRI++PP L YVEG +DGKPGP+P G GP+QQ+    N R   P  +   EV+L ++R
Sbjct:   39 YKKLPSGVVYADLRPGSGTEMAEQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVQGMKVGGVRRILIPPALAYVEGLEDGKPGPLPAGFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 174          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.470e-35
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0
Query:  105 LPSGVQITDIVVGNGD-AADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 212
            LPSGV   D+ VG+G+  A     V ++WVLR+SNGY+V SS   +G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DGKPGP+P G GPKQQ+
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQM 122          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A1Z5K3Y4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y4_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.860e-34
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 0
Query:  102 FTVLPSGVQITDIVVGNG-DAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEPLSF---EVKLVKVR 230
            +  LPSGV   D+  G+G + A     V L+WVLRRSNGY+V SS   +G PFI+ VGD K AI+G+D+G+RGMK GG RRI++PP L YVEG +DGKPGP+P   GP+QQ+    N R   P  +   EV+L ++R
Sbjct:   92 YKKLPSGVVYADLRPGSGTETAQQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVRGMKVGGVRRILIPPSLAYVEGLEDGKPGPLPACFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 227          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A6U3UST0_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UST0_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.660e-34
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 0
Query:  102 FTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQIN----TRNKEP---LSFEVKLVKVR 230
            +  LPSGV   D+ VGNG+ A       ++WVLR+SNGY+V SS   +G PFI+ VGD   AI G+D+GIRGMK GG RR+++ P+  YV G +DGKPGP+P+G GPKQQ+      R   P   +  E++L ++R
Sbjct:  128 YKKLPSGVIYADLRVGNGEEAVEGSRANIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKNGAIAGVDEGIRGMKVGGVRRLLIQPKYAYVTGVEDGKPGPLPVGFGPKQQMRRVMEARKDVPGEYIFLEIQLTRIR 263          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S0CE61_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE61_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.600e-33
Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = 0
Query:  105 LPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTK--RAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 212
            LPSGV   D+ +G+GD     K V ++W L+RSNGY + SS+  +  PFI+ VG  K  RAI GLD+GIRGM+ GG RRI++PP L YVEG  DGKPGPIP G GPKQ+I
Sbjct:   34 LPSGVSYQDLRLGDGDVVSEGKRVNIQWSLKRSNGYSIDSSSNNDSVPFIFIVGAKKGQRAIAGLDEGIRGMRVGGIRRIIMPPILTYVEGLDDGKPGPIPPGFGPKQRI 143          
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S1DBV5_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBV5_CYCTE)

HSP 1 Score: 129 bits (323), Expect = 3.480e-33
Identity = 87/244 (35.66%), Postives = 127/244 (52.05%), Query Frame = 0
Query:    3 RLLFFVTAISPFV--GQAFVQHAMPRVRAVPSAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPA-------PVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEP---LSFEVKLVKVR 230
            +L   V  +S  V   +AF      + R   S  +  +S+   +R + +   AAA V G  ++S  + +    P A           L D D   P  R         +  L SGV + D+  GNGD    +  V L+WVLR+SNGY+V SS   +  PFI+ VGD   AIKG+D+G+ GM+ GG RR+++PP L YV+G +DGKPGP+P G GP+QQ+    N R   P   +  EV++ ++R
Sbjct:    2 KLSLLVAVVSSAVLGSRAFCPSGSRQTRLSTSLFEKSTSNIEPTRRDVL---AAAMVLGGLSFSPSISQAQDPPKALSEEYRQGTAALADMDDDAPVPREA-------YKKLESGVILADLRKGNGDVVQESSRVNLQWVLRKSNGYFVDSSERNDAVPFIFTVGDGT-AIKGVDEGVIGMRQGGVRRLLIPPSLAYVDGLEDGKPGPLPYGFGPRQQMRRVQNVRKDVPGEYIYLEVQVTRIR 234          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI9.690e-11575.11Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA1.200e-4658.27Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S4J203_9STRA2.310e-3840.20Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
B8C0A9_THAPS2.740e-3653.68Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A1Z5JCU4_FISSO7.600e-3651.09Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E2F1_9STRA5.470e-3555.96Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A1Z5K3Y4_FISSO1.860e-3451.09Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A6U3UST0_9STRA4.660e-3447.79Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S0CE61_9STRA1.600e-3357.27Peptidylprolyl isomerase n=1 Tax=Proboscia inermis... [more]
A0A7S1DBV5_CYCTE3.480e-3335.66Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 123..227
e-value: 8.0E-14
score: 51.7
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 125..230
score: 14.202
NoneNo IPR availableGENE3D3.10.50.40coord: 100..230
e-value: 1.4E-23
score: 85.1
NoneNo IPR availablePANTHERPTHR43811:SF26PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTICcoord: 102..229
NoneNo IPR availablePANTHERPTHR43811FAMILY NOT NAMEDcoord: 102..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.587
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 93..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig1contigC-linearis_contig1:1739816..1743120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig1.122.1mRNA_C-linearis_contig1.122.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig1 1739803..1743682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig1.122.1 ID=prot_C-linearis_contig1.122.1|Name=mRNA_C-linearis_contig1.122.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
MARLLFFVTAISPFVGQAFVQHAMPRVRAVPSAMKMHSSDEGLSRGEAMR
RVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIP
PFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEG
EPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPG
PIPLGLGPKQQINTRNKEPLSFEVKLVKVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom