mRNA_C-linearis_contig1.122.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig1.122.1
Unique NamemRNA_C-linearis_contig1.122.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 7.470e-112
Identity = 175/233 (75.11%), Postives = 189/233 (81.12%), Query Frame = 2 
Query:   14 MARLLFFVTAISPFVGQAFVQHAMPRV---RAVPSAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQINTRNKEPLSFEVKLVKVR 703
            M RL F + AI+  V  AFV    P +   RA    M    +DEG+SRGE +R VAAACVTGS AWS+    VSAK PAPVM+LPDDD  KPA RSGGEGSIPPFTVLPSGVQITDIV G+G  ADT KGVTLKWV+RRSNGYYVSSS EG GEPFIYRVGD KRAIKGLDDGIRGMK+GGTRRIVVPP+LGYVEGCKDG PGPIP+GLGPKQQINTRNKEPL+FEVKL KVR
Sbjct:    2 MDRLSFSIFAIAQLVTHAFVPATFPHLGVRRATGLRMCSSPADEGMSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPDDDSAKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.710e-44
Identity = 81/139 (58.27%), Postives = 101/139 (72.66%), Query Frame = 2 
Query:  290 SGGEG-SIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQINTRNKEPLSFEVKLVKVR 703
            SG E  ++P F  LPSGV+ITDI VGNG        V+L+WVLRRSNGY+V SS     +PFIYRVGD ++AIKG D+GIRGMK GG RR++VPP+LGYV+G  D KPGP+P G GP++Q+  R  EP  FEV++  VR
Sbjct:  210 SGDENPNLPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVR 348
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BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.230e-36
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 2 
Query:   59 GQAFVQHAMPRVRAVP--SAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 649
            G  F   +  R R  P  +A   H+    ++R          C + + A+S          PAP   + ++ P  P +    +        LPSGV   D+  G+GD  +  K V ++WVL+RSNGY+V SS+  +G PFI+ VGD K A+ G+D+GIRGM+ GG RRI+VPP L YVEG +DGKPGPIP G GPKQ++
Sbjct:   33 GNRFDSSSANRPRGAPKTTAAAAHADRRNVARDIIAGGAGIFCTSAALAFS----------PAPSFAMYENAPAVPEESQQIQ--------LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRM 213
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 137 bits (346), Expect = 3.190e-34
Identity = 73/136 (53.68%), Postives = 87/136 (63.97%), Query Frame = 2 
Query:  317 FTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQIN----TRNKEP---LSFEVKLVKVR 703
            +  L SGV   DI  G+G+       V L+WVLRRSNGY+V SSA  +  PFI+ VGD K AI GLD  +RGMK GGTRRI++PP+L YV G  DGKPGPIP G GP+QQ+      R   P   +  EVKL KVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A1Z5JCU4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCU4_FISSO)

HSP 1 Score: 134 bits (336), Expect = 7.890e-34
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 2 
Query:  317 FTVLPSGVQITDIVVGNG-DAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEPLSF---EVKLVKVR 703
            +  LPSGV   D+  G+G + A+    V L+WVLRRSNGY+V SS   +G PFI+ VGD K AI+G+D+G++GMK GG RRI++PP L YVEG +DGKPGP+P G GP+QQ+    N R   P  +   EV+L ++R
Sbjct:   39 YKKLPSGVVYADLRPGSGTEMAEQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVQGMKVGGVRRILIPPALAYVEGLEDGKPGPLPAGFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 174
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.180e-33
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 2 
Query:  326 LPSGVQITDIVVGNGD-AADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 649
            LPSGV   D+ VG+G+  A     V ++WVLR+SNGY+V SS   +G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DGKPGP+P G GPKQQ+
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQM 122
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A1Z5K3Y4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y4_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.830e-32
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 2 
Query:  317 FTVLPSGVQITDIVVGNG-DAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEPLSF---EVKLVKVR 703
            +  LPSGV   D+  G+G + A     V L+WVLRRSNGY+V SS   +G PFI+ VGD K AI+G+D+G+RGMK GG RRI++PP L YVEG +DGKPGP+P   GP+QQ+    N R   P  +   EV+L ++R
Sbjct:   92 YKKLPSGVVYADLRPGSGTETAQQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVRGMKVGGVRRILIPPSLAYVEGLEDGKPGPLPACFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 227
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BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A6U3UST0_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UST0_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.600e-32
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 2 
Query:  317 FTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQIN----TRNKEP---LSFEVKLVKVR 703
            +  LPSGV   D+ VGNG+ A       ++WVLR+SNGY+V SS   +G PFI+ VGD   AI G+D+GIRGMK GG RR+++ P+  YV G +DGKPGP+P+G GPKQQ+      R   P   +  E++L ++R
Sbjct:  128 YKKLPSGVIYADLRVGNGEEAVEGSRANIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKNGAIAGVDEGIRGMKVGGVRRLLIQPKYAYVTGVEDGKPGPLPVGFGPKQQMRRVMEARKDVPGEYIFLEIQLTRIR 263
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S0CE61_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE61_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.390e-31
Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = 2 
Query:  326 LPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTK--RAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI 649
            LPSGV   D+ +G+GD     K V ++W L+RSNGY + SS+  +  PFI+ VG  K  RAI GLD+GIRGM+ GG RRI++PP L YVEG  DGKPGPIP G GPKQ+I
Sbjct:   34 LPSGVSYQDLRLGDGDVVSEGKRVNIQWSLKRSNGYSIDSSSNNDSVPFIFIVGAKKGQRAIAGLDEGIRGMRVGGIRRIIMPPILTYVEGLDDGKPGPIPPGFGPKQRI 143
[Close]
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Match: A0A7S1DBV5_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBV5_CYCTE)

HSP 1 Score: 129 bits (325), Expect = 1.610e-31
Identity = 86/241 (35.68%), Postives = 126/241 (52.28%), Query Frame = 2 
Query:   23 LLFFVTAISPFVGQAFVQHAMPRVRAVPSAMKMHSSDEGLSRGEAMRRVAAACVTGSAAWSSPVDRVSAKPPA-------PVMQLPDDDPVKPAQRSGGEGSIPPFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEGEPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPGPIPLGLGPKQQI----NTRNKEP---LSFEVKLVKVR 703
            LL  V + +    +AF      + R   S  +  +S+   +R + +   AAA V G  ++S  + +    P A           L D D   P  R         +  L SGV + D+  GNGD    +  V L+WVLR+SNGY+V SS   +  PFI+ VGD   AIKG+D+G+ GM+ GG RR+++PP L YV+G +DGKPGP+P G GP+QQ+    N R   P   +  EV++ ++R
Sbjct:    5 LLVAVVSSAVLGSRAFCPSGSRQTRLSTSLFEKSTSNIEPTRRDVL---AAAMVLGGLSFSPSISQAQDPPKALSEEYRQGTAALADMDDDAPVPREA-------YKKLESGVILADLRKGNGDVVQESSRVNLQWVLRKSNGYFVDSSERNDAVPFIFTVGDGT-AIKGVDEGVIGMRQGGVRRLLIPPSLAYVDGLEDGKPGPLPYGFGPRQQMRRVQNVRKDVPGEYIYLEVQVTRIR 234
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI7.470e-11275.11Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA2.710e-4458.27Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S4J203_9STRA4.230e-3640.20Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
B8C0A9_THAPS3.190e-3453.68Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A1Z5JCU4_FISSO7.890e-3451.09Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E2F1_9STRA5.180e-3355.96Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A1Z5K3Y4_FISSO1.830e-3251.09Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A6U3UST0_9STRA4.600e-3247.79Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S0CE61_9STRA1.390e-3157.27Peptidylprolyl isomerase n=1 Tax=Proboscia inermis... [more]
A0A7S1DBV5_CYCTE1.610e-3135.68Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig1contigC-linearis_contig1:1739803..1743682 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue5.2e-90
Seed eggNOG ortholog2880.D7FIZ9
Hectar predicted targeting categorychloroplast
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
Ec32 ortholog descriptionPlastid FKBP domain protein
Ec32 orthologEc-07_004980.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1268
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927278.7170734-UTR-C-linearis_contig1:1739802..17398151622927278.7170734-UTR-C-linearis_contig1:1739802..1739815Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1739803..1739815 +
1690879601.1101313-UTR-C-linearis_contig1:1739802..17398151690879601.1101313-UTR-C-linearis_contig1:1739802..1739815Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1739803..1739815 +
1622927278.8151274-UTR-C-linearis_contig1:1743120..17436821622927278.8151274-UTR-C-linearis_contig1:1743120..1743682Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1743121..1743682 +
1690879601.196229-UTR-C-linearis_contig1:1743120..17436821690879601.196229-UTR-C-linearis_contig1:1743120..1743682Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1743121..1743682 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927278.728961-CDS-C-linearis_contig1:1739815..17399381622927278.728961-CDS-C-linearis_contig1:1739815..1739938Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1739816..1739938 +
1690879601.1228862-CDS-C-linearis_contig1:1739815..17399381690879601.1228862-CDS-C-linearis_contig1:1739815..1739938Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1739816..1739938 +
1622927278.74201-CDS-C-linearis_contig1:1740452..17405791622927278.74201-CDS-C-linearis_contig1:1740452..1740579Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1740453..1740579 +
1690879601.1344397-CDS-C-linearis_contig1:1740452..17405791690879601.1344397-CDS-C-linearis_contig1:1740452..1740579Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1740453..1740579 +
1622927278.755607-CDS-C-linearis_contig1:1740912..17409851622927278.755607-CDS-C-linearis_contig1:1740912..1740985Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1740913..1740985 +
1690879601.1429002-CDS-C-linearis_contig1:1740912..17409851690879601.1429002-CDS-C-linearis_contig1:1740912..1740985Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1740913..1740985 +
1622927278.7669601-CDS-C-linearis_contig1:1741487..17416321622927278.7669601-CDS-C-linearis_contig1:1741487..1741632Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1741488..1741632 +
1690879601.151148-CDS-C-linearis_contig1:1741487..17416321690879601.151148-CDS-C-linearis_contig1:1741487..1741632Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1741488..1741632 +
1622927278.7778902-CDS-C-linearis_contig1:1742176..17422691622927278.7778902-CDS-C-linearis_contig1:1742176..1742269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1742177..1742269 +
1690879601.1637065-CDS-C-linearis_contig1:1742176..17422691690879601.1637065-CDS-C-linearis_contig1:1742176..1742269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1742177..1742269 +
1622927278.790768-CDS-C-linearis_contig1:1742652..17427571622927278.790768-CDS-C-linearis_contig1:1742652..1742757Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1742653..1742757 +
1690879601.1773612-CDS-C-linearis_contig1:1742652..17427571690879601.1773612-CDS-C-linearis_contig1:1742652..1742757Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1742653..1742757 +
1622927278.8049097-CDS-C-linearis_contig1:1743093..17431201622927278.8049097-CDS-C-linearis_contig1:1743093..1743120Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1743094..1743120 +
1690879601.1861303-CDS-C-linearis_contig1:1743093..17431201690879601.1861303-CDS-C-linearis_contig1:1743093..1743120Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1743094..1743120 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig1.122.1prot_C-linearis_contig1.122.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig1 1739816..1743120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig1.122.1

>prot_C-linearis_contig1.122.1 ID=prot_C-linearis_contig1.122.1|Name=mRNA_C-linearis_contig1.122.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
MARLLFFVTAISPFVGQAFVQHAMPRVRAVPSAMKMHSSDEGLSRGEAMR
RVAAACVTGSAAWSSPVDRVSAKPPAPVMQLPDDDPVKPAQRSGGEGSIP
PFTVLPSGVQITDIVVGNGDAADTAKGVTLKWVLRRSNGYYVSSSAEGEG
EPFIYRVGDTKRAIKGLDDGIRGMKAGGTRRIVVPPQLGYVEGCKDGKPG
PIPLGLGPKQQINTRNKEPLSFEVKLVKVR*
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mRNA from alignment at C-linearis_contig1:1739803..1743682+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig1.122.1 ID=mRNA_C-linearis_contig1.122.1|Name=mRNA_C-linearis_contig1.122.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3880bp|location=Sequence derived from alignment at C-linearis_contig1:1739803..1743682+ (Chordaria linearis ClinC8C monoicous)
AGCAGAAGAGACTATGGCTCGATTGCTGTTCTTTGTTACCGCAATTTCGC
CGTTTGTCGGGCAAGCATTCGTGCAGCATGCGATGCCACGAGTGCGAGCT
GTTCCATCCGCGATGAAAATGCACTCTTCAGACGAGGTACAAGTTCGTTT
AATTGGTCATGTGTGCCAGGAATGCTGCCATGATTCAGAGTGACCAGGTT
ATATACATGGGGGACATCATCTGTCAATTCTTGTCCTCAATATGCACCCT
AGCACCCGGGCTGTGCTTCTCCGCACCGACGGATCATGTACCGAAAGTTG
CACCGCATGTTTGAGAATCCGGACTCAGTGACATCAGTGTATAAGCCCAC
CTCTCCGCAACCAATCTCTAGAGATTTAAGATTTTAGGTTAGGCCTTGTG
ACGCCGGGTACAGTACCATCGTTGAGATACGAAAGTACAGATTACAGCGA
TCTAAGCACCGTGATGAATTATACGTCAGCACCCTGGGTTAAGGAAACAC
CGGTATTTGCCTTTCTTTGGGGCCGCGCACATGTTTCACCGAGAATTCTA
AACCGTTTCGTCCGCTTGTGGCCGTCAGTTTGTGGTGTTTTGACCCTTGC
TCTGCCATGACTCGTGCGTTTATTCACTACGTTTCTTGTTTCTCTCCCAG
GGCCTATCACGAGGGGAGGCAATGCGCCGCGTTGCTGCAGCCTGTGTGAC
GGGCAGTGCGGCTTGGAGCTCTCCAGTAGACAGAGTATCAGCCAAGCCGC
CTGCCCCAGTGATGCAGCTTCCAGACGGTGAGCCTCCTGTCGCTTGCCAC
AAGGAGCACATCAAAAGAAGAGTAAAAAAACTCTACATACTGCTGTCAGT
TACAGGTTTTTGGTGCCCCTCCAATCTTCGTACTTCCGTCCAATCGGGCA
TGGCTCTTTGCCACTCGATCTGCCACGAGTTTGTGCACGGGTTGTTATCC
CGGGCTTGCCCAAAGAGTACAGCAGTAGTCTAGCTGCAGCATTCCCGCAC
GAGAAAAACTAGCTCGAAACTTTTTAACGTTTACGTCATGATGCCCAATG
AGCCTGGTGCACCTCTCCGTTCCGCCTCGTGGTCTCGTGATGCGTACGTT
CCTGGGGCAGATGACCCTGTCAAGCCGGCACAGCGGAGCGGAGGCGAAGG
GAGCATCCCGCCGTTTACGGTCCTCCCATCAGGGTAACGCGAATATTCCC
GTCTGATGTCGATTCAAGTTTTTTTTTGCTCAATGACGTCGTCGAATGTG
GCAGATATTTTGAGGCAGCGAAAGTCCCACCAATGGAGCATCTAAGGACC
CTTCTAGCAATCGCACGCAACAGGGGCGCTCTAATGCATAACTCCGCCTA
TTAATTGTCTGGCCTCCACATTTTTTGTGCGCTTTTTTCTCTCTCTTGAA
ACACGAGGCACCCTCAGTCTTCATTGTTGTTGGCGATGAGCAAATACCAA
TGGTTGCAATTCGAGCCATTCGACACCCATTGATTGGGTGATAAACGTTT
CAGTCTCGTGCTTCGCAGGCCCACGGTTACCTTCCTTGTCGGTTGTAACG
TAAATTGCAAGATACAGCCGCATCACTTCGTACAGGCACACCAATACTTG
AATCGATGGAACAAAGACGGTCGAATGTTTCCCATCTCCTGCCACCTCCT
GCGCGCACGCGCCCCACTGCTATCCAATCCACCAGGGTCCAAATCACTGA
CATCGTGGTCGGTAATGGTGACGCGGCAGACACCGCCAAGGGGGTGACCC
TCAAGTGGGTACTGCGACGAAGCAACGGCTACTACGTCAGCTCTTCCGCA
GAGGGAGAAGGAGAACCGTTCATCTACAGGGTAAGCGAGCACTACAACGA
GTGCGCGGCGAAAGGTTTATGAGGGGTTTGCCACTCGCCTACAGCTGTAG
TGATGCGTCCCATGGGTGATCTGCTGCTGTTGCTACCCCTGGTTTGAAAC
TGCTATTGCTCTCAAGTTTATTTTCAAGACAGAACAAGCGACGTTATAGG
CTGGTATAGGTGGTATTACCTTGATGAACACACACACACCCTTTGGTTGT
TCCTTTATGATGAGGATTCGACCAACAACGGGAGAACGCGCGGCGAGGGT
GTGTGAAGAGAAAGACCGCGCGAGGCCGTCAAAACCGAAACAACTAGCGC
TACTCTTGTGTTTCGTGAAAAAAACGTAAGGCTTTGCTTGCATGTGGCTC
ACGCTGTCAATTTAGCAAATGCGAAATCTTTTCAGATAGCGTCGGGGACG
GCGAGGAAGAGGGGGGAATTGCAGAAGAGAGGACTGAAAGGAGCAGAGGT
TTCCGTTGCCTACTTCAGAAGACAACAAGTTAATTGACGCCGCTCTTCTT
GTTTCTTGTCCAACGTTCCGCTAGGTGGGTGACACAAAGCGAGCAATCAA
AGGTTTAGACGATGGAATCAGAGGGATGAAAGCGGGGGGGACAAGGCGCA
TCGTCGTACCTCCTCAGGTGAGCCGAGCGTGCTGTTGCCCACGGCAAGAA
AGGAGAGGGATTCCAAGCGATTTGTGTTTGAATCGCAATGCTTGTCGACC
TCAGGACACTTTGTTGTGGCAGTACTGCAAGCGACTGCCGTCGTGCAGGT
CCTCAAACTCGCTGGGACAACGTCGTCATGCCACGTGTTTAATTGCGGTC
AGGCTATGTAGCCAACCAGATATTCACACCCTGACGTGAGCGAACAATCA
CCGACAATAATGATTATTGTACCTTGGCGAACAGCCCGTTCCTCCTCTGC
GTTTTCAGCGTACAATACACAAATCTTGAGCACACGCTGCGGACTAACTT
GACTTCGAAAACGCTGCACGCCAACTCGCGCCCTGCTGATACGTGTGCAG
TTGGGATATGTGGAGGGCTGCAAGGATGGGAAACCAGGACCCATTCCGTT
GGGGCTGGGGCCGAAGCAGCAGATCAACACTCGCAACAAGGAGCCTCTGT
CATTTGTGAGTGTTCCATCTGTCTGGCGCGCAAGAACGCTTGTTTTTGTT
TCCCCTAAAATGGCTGCCCGCACCGCATGAAAGCTTAGTCTGCCCTAGCA
GCTTTCAGCAGTTTTTTGTCCAGGCAGCGTCTCGTCGTGGCACACATCGG
CGTTAACCGGCCTTGAACAACCTCAAAACCCAGATGCTTTGGTGTAATAC
CCCCTTTACTGTACCCTCACAAAAAATGTCAACGGTAAATGAGCATGATC
ATGCGCCACCATGTGCCTATTTCCACCCCCCCGTCCGCAGACCTCTTGAA
CCGCTCTCCCTTGTGTTTGCCGATATTTGCTTGTTCGGCAGGAGGTCAAG
CTGGTCAAGGTTCGATAGCCCTCGGACAAACCAGGAGTGTTGCGCATCAG
AAATCTCTCTGAAGGCCCCGCCAAAGTCTCTGGTTTGCTGTTGCGCCACT
CGCGGCACGTCGCGTGTCGCTCACTTGGCGGTGGCGGCACCCCTTGAGAT
GAACTCGAATCGATTGATGGACGAGAAAGGAGCACTCCTCCGATTGTCCA
AGCGCCGGACAAATTACGTGCGTTAAGAGGGATAGGATAGAGTCTGGACA
GCAGTTCAGCCACAGGCCCGGATGTGTATATGGATGTGCGCAGAGTGCAA
TAGACGCTGGGACACAACGGGGTTTTAGCTTCAAGTAGAGGTGGCGAGCG
GGAGCGGAGCAAGAAGGACGCGGCAGGCGAGGAAGTACGAGAAACCCGCC
TTGTTGAGACTTGATGCTCACACACCGCCCGGAGGCCGACGTGGTCGTAC
AATTGCTATTGCTGTTCCATTGCACTGCTGTGTTGGCTAATAGGGGGCTT
CCTTTGCATGGAGCTACCAGAAACCCCCCATCAACGCACATGAAGTACAT
GATTAACAATCCGGCCTGATTCCCCTTTTG
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Coding sequence (CDS) from alignment at C-linearis_contig1:1739803..1743682+

>mRNA_C-linearis_contig1.122.1 ID=mRNA_C-linearis_contig1.122.1|Name=mRNA_C-linearis_contig1.122.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at C-linearis_contig1:1739803..1743682+ (Chordaria linearis ClinC8C monoicous)
ATGGCTCGATTGCTGTTCTTTGTTACCGCAATTTCGCCGTTTGTCGGGCA
AGCATTCGTGCAGCATGCGATGCCACGAGTGCGAGCTGTTCCATCCGCGA
TGAAAATGCACTCTTCAGACGAGATGGCTCGATTGCTGTTCTTTGTTACC
GCAATTTCGCCGTTTGTCGGGCAAGCATTCGTGCAGCATGCGATGCCACG
AGTGCGAGCTGTTCCATCCGCGATGAAAATGCACTCTTCAGACGAGGGCC
TATCACGAGGGGAGGCAATGCGCCGCGTTGCTGCAGCCTGTGTGACGGGC
AGTGCGGCTTGGAGCTCTCCAGTAGACAGAGTATCAGCCAAGCCGCCTGC
CCCAGTGATGCAGCTTCCAGACGGGCCTATCACGAGGGGAGGCAATGCGC
CGCGTTGCTGCAGCCTGTGTGACGGGCAGTGCGGCTTGGAGCTCTCCAGT
AGACAGAGTATCAGCCAAGCCGCCTGCCCCAGTGATGCAGCTTCCAGACG
ATGACCCTGTCAAGCCGGCACAGCGGAGCGGAGGCGAAGGGAGCATCCCG
CCGTTTACGGTCCTCCCATCAGGATGACCCTGTCAAGCCGGCACAGCGGA
GCGGAGGCGAAGGGAGCATCCCGCCGTTTACGGTCCTCCCATCAGGGGTC
CAAATCACTGACATCGTGGTCGGTAATGGTGACGCGGCAGACACCGCCAA
GGGGGTGACCCTCAAGTGGGTACTGCGACGAAGCAACGGCTACTACGTCA
GCTCTTCCGCAGAGGGAGAAGGAGAACCGTTCATCTACAGGGGTCCAAAT
CACTGACATCGTGGTCGGTAATGGTGACGCGGCAGACACCGCCAAGGGGG
TGACCCTCAAGTGGGTACTGCGACGAAGCAACGGCTACTACGTCAGCTCT
TCCGCAGAGGGAGAAGGAGAACCGTTCATCTACAGGGTGGGTGACACAAA
GCGAGCAATCAAAGGTTTAGACGATGGAATCAGAGGGATGAAAGCGGGGG
GGACAAGGCGCATCGTCGTACCTCCTCAGGTGGGTGACACAAAGCGAGCA
ATCAAAGGTTTAGACGATGGAATCAGAGGGATGAAAGCGGGGGGGACAAG
GCGCATCGTCGTACCTCCTCAGTTGGGATATGTGGAGGGCTGCAAGGATG
GGAAACCAGGACCCATTCCGTTGGGGCTGGGGCCGAAGCAGCAGATCAAC
ACTCGCAACAAGGAGCCTCTGTCATTTTTGGGATATGTGGAGGGCTGCAA
GGATGGGAAACCAGGACCCATTCCGTTGGGGCTGGGGCCGAAGCAGCAGA
TCAACACTCGCAACAAGGAGCCTCTGTCATTTGAGGTCAAGCTGGTCAAG
GTTCGATAGGAGGTCAAGCTGGTCAAGGTTCGATAG
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