prot_C-linearis_contig1.114.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig1.114.1
Unique Nameprot_C-linearis_contig1.114.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length365
Homology
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: D7FJ00_ECTSI (Suppressor of lin-12-like protein-related / sel-1 protein-related n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ00_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 2.920e-128
Identity = 215/371 (57.95%), Postives = 259/371 (69.81%), Query Frame = 0
Query:    1 LHSAIQSREYGSFDTPEIRTVEWS-SADGESLVLTFSASTNRPRLNDAVSINNALMLNHGDIELVAGRGAWSPGGEALTITDLDPENWRHIITAISDGTFHATPRKKLLVGAEIWGGDNSSLSSDPPAGQLRGNLTIRMVFPGYFTAHLFVGERLESTSAQVIEVQLCPNEVVMIAPKHSPPFSSEAPRSVFGADGVLSLPGDKFLKASLPKHFGVPSSLFAEHQRPPGGGFRSET-----QGSWSIAFWIYLVDLPTASFRGLFYKG-GGGEMGRTPSAWLCPNSNRIALRVTSETNPDIGADSIASLGTNTWNHVAFSFKNNTDGNFSATIFINGTLDISVGFNEQNVLSNTGPLHIGRDPSNKGPRRV 364
            +HS I S ++G+F  PE+RT +WS   DG  +VL F+  TN P LN  V +NNAL++N G+I + AGRG WS  GE L+ITDLDP +WR I  +IS G FH  PR+K+LVGA+  GG   S        +LRG+LT+RM FPG F AHLFVGE+L+S SA++IEV  CP +VV +A  +    S E P+  F ADGVLS+PGDK+LK        VPSSLF  +QR P GG +SE      + SWS + WIYL+D  T SFRGLFYKG GG  MGRTPSAWLC +SNRIALRVTS+TNPDIGADS+ASL   TWNHV F+F N T G FS+TIFINGTLDISV F+   VL N GPLHIGRD SN GPR +
Sbjct:    2 MHSVIHSWDHGAFKIPEVRTAKWSRGTDGAFVVLHFTEPTNCPPLNGDVDLNNALVINRGEITVTAGRGEWSANGEVLSITDLDPGSWRAITASISSGDFHVKPREKVLVGADNGGGKTGSPD------ELRGSLTMRMSFPGRFVAHLFVGEQLDS-SAEIIEVDFCPEQVV-VALSNPGSGSVEDPQPFFSADGVLSMPGDKWLK--------VPSSLF-HYQREPVGGIQSEQMTPGRRSSWSFSLWIYLLDDATGSFRGLFYKGDGGATMGRTPSAWLCSHSNRIALRVTSDTNPDIGADSVASLNAGTWNHVVFTFDNTTSGEFSSTIFINGTLDISVQFDGTTVLGNDGPLHIGRDTSNLGPRSL 355          
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: F0XWA6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWA6_AURAN)

HSP 1 Score: 142 bits (359), Expect = 1.190e-33
Identity = 113/351 (32.19%), Postives = 163/351 (46.44%), Query Frame = 0
Query:   31 LVLTFSASTNRPRLNDAVSINNALMLNHGDIELVAGRGAWSPGGEALTITDLDPENWRHIITAISDGTFHATPRKKLLVGAEIWGGDNSSLSSDPPAGQLRGNLTIRMVFPGYFTAHLFVGERLESTSAQVIEVQLCPNEVVM------IAPKHSPPFSSEAPRSVFGADGVLSLPGDKFLKASLPKHFGVPSSLFAEHQRPPGGGFRSETQGSWSIAFWIYLVDLPTASFRGLFYKGGGGEMG--RTPSAWLCPNSNRIALRVTSETN-PDIGADSIASLGTNTWNHVAFSFKNNT-------DGNFSATIF---INGTLDISVGFNEQNVLSNTGPLHIGRDPSNKGPR 362
            + L F A TN P + D  +    +  N   + L A    W  GG  L      P +   I     D +F A         A  W          PPA  + G   +R+   G +TA L VG+ + + +A  + V+ C + VV+       A   +PP    AP   + A GV +  GD  LK        +P+      + P  G      +G +S+AFWIY+ + P+ + RG+F+KG  G +G  RTPSAWL P+SNR+ALRV++     D+GAD+   L T  W HV FSF N T       DG  +  +F   ++G  D ++ F +  V  N G LH+GRDP  +G R
Sbjct:  121 MALEFDAPTNAPPVADVAAFERLVRTN---VALRAASFRWDDGGRTLVARVNAPGDAEAIAARFEDRSFEAA--------AAPWPPPRK-----PPA-TVEGEARLRLAVAGEYTAALVVGDAVAAVAAATVTVEACADAVVVDVDRAAAAEALAPPAPPLAPW--WDARGVFATAGDNALK--------IPAE-----ELPLLG------RGDFSLAFWIYVAEEPSGAHRGVFFKGDVGRLGGARTPSAWLLPDSNRLALRVSTHAGGDDVGADTELPLPTYAWTHVVFSFANRTANPEPRADGRLARFVFGFYVDGRRDSTLDFYDD-VAWNDGALHLGRDPDRRGFR 432          
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: A0A7S3ZY42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY42_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.730e-29
Identity = 102/352 (28.98%), Postives = 153/352 (43.47%), Query Frame = 0
Query:   16 PEIRTVEWSSADGESLVLTFSASTNRPRLNDAVSINNALMLNHGDIELVAGRGAWSPGGEALTITDLDPENWRHIITAISDGTFHATPRKKLLVGAEIWGGDNSSLSSDPPAGQLRGNLTIRMVFPGYFTAHLFVGERLESTSAQVIEVQLCPNEVVMIAPKHSPPFSSEAPRSVFGADGVLSLPGDKFLKASLPKHFGVPSSLFAEHQRPPGGGFRSETQGSWSIAFWIYLVDLPTASFRGLFYKGGGGEMG--RTPSAWLCPNSNRIALRVTSETNPDIGADSIASLGTNTWNHVAFSFKNNTDGN---FSATIFINGTLDISVGFNEQNVLSNTGPLHIGRDPSNKGPR 362
            P +  + W+ AD  ++ L F  +TN P + D  + +  +  N   IEL A   +W   G+ L I    P +        +D    A   +        W       S  PP   L G   +R+     +   L    R+ES +  ++ V+ C    V    +           S+   D  L LPG             V +S    H   P      + Q  W + FWIY+ D PT + RGLF+KG    +G  RTPSAWL P+SN++ALRV+++   DIGAD+   L    W H+ F F N +D +   +  T+ ++G  D ++   +Q V  N GPL + RDP  +G R
Sbjct:  135 PLLTAMRWN-ADSWTMTLEFEKATNAPPIKDVRAFDRLISTN---IELRALTASWEANGQHLAIHINAPND--------ADAVQEAFDSRSFWAACAPW----PPPSRHPPV--LSGEAVMRVPVASSYEVALVNDGRVESNAGSIL-VEACDGTFVSDIDR----VDDTLTESIDADDVWLELPG-------------VYASSGQRHISLPPEELPLQAQQDWGLEFWIYIEDAPTGAHRGLFFKGDVDRLGGQRTPSAWLAPDSNKVALRVSTDKGLDIGADTDTPLPVKKWTHLQFGFHNLSDASDVKYLLTLDVDGARDATLEIFDQ-VTWNDGPLQLFRDPDRRGVR 449          
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: A0A0P1ACA9_PLAHL (Extracellular protein SEL-1 and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACA9_PLAHL)

HSP 1 Score: 114 bits (284), Expect = 7.370e-24
Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 0
Query:  227 PGGGFRSETQGSWSIAFWIYLVDLPTASFRGLFYKGGGGEMGRTPSAWLCPNSNRIALRVTSETNPDIGADSIASLGTNTWNHVAFSFKN----NT-----------DGNFSATIFINGTLDISVGFNEQNVLSNTGPLHIGRDPSNKGPR 362
            P    + ET GSWS++FW++L++  T  FR LF+ G G    RTPSAW  PN  R+ LRV++ T+ D+G DS + L    W H+ F+F N    NT             N+S +++I+G LD  +  +E  V  NTGPL+IG+ P   G R
Sbjct:  346 PHALIQMETPGSWSLSFWVFLIENCTGDFRSLFFHGDGENQQRTPSAWWKPNERRLVLRVSTTTSADVGIDSASELPLYEWVHMGFTFVNCSHSNTHEKCSLKESSQSWNYSYSLYIDGMLDTQMHIHES-VAPNTGPLYIGKGPGTDGMR 495          
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: A0A7S2WID4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WID4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.880e-16
Identity = 88/360 (24.44%), Postives = 154/360 (42.78%), Query Frame = 0
Query:   27 DGESLVLTFSASTNRPRLNDAVSINNALMLNHGDIELVAGRGAWSPGGEALTITDLDPENWR-HIITAISDGTFHATPRKKLLVGAEIWGGDN--SSLSSDPPAGQ----LRGNLTIRMVFPGYFTAHLFVGERLESTS-AQVIEVQ-LCPNEVVMIAPKHSPPFSSEAPRSVFGADGVLSLPGDKFLKASLPKHFGVPSSLFAEHQRPPGGGFRSETQGSWSIAFWIYLVDLPTAS---------FRGLFYKGGGG--EMG-RTPSAWLCPNSNRIALRVTSETNPDIGADSIASLGTNTWNHVAFSFKNNTDGN----FSATIFINGTLDISVGFNEQNVLSNTGPLHIGRDPSNKGP 361
            DG S+ + F   T+ P +    +I N ++ +             +  G+ L+   +DP+  + +I+ +     +H  P    +   E    +   SSL++   + +    ++G +++R+ F G F   LF  +  E    ++  ++  +   E  ++  ++S        + ++     + + G +     LP+         A+HQ   G         +WSI+FW+ +     +S         FR L Y G G   E G RTPS WL P SN +ALRV++  + D G +S   L    W H+A +F+N T  N    + A IF +G   +    +E  VL+  G LH G D    GP
Sbjct:  161 DGASITVMFDRETDMPDVESDQAIRNVIVFS-------------ASIGQELSGQWIDPKTLKINIVDSTGHSDYHNEPVTARIGMRERRPSERLYSSLATLEGSHESDILVKGVVSVRIGFEGTFHVALFTLDETEPACVSEPFDINAISQQETTIVIGRNSVSQGDNRLKPIWSLKPKVVMTGSRL---KLPRVLNKARVAQADHQLFDGD--------AWSISFWLAIAPKAYSSRCSTVDNTHFRALLYHGAGKGHERGARTPSVWLFPGSNTLALRVSTVESSDFGINSKKQLTEGKWVHLAMTFENTTSENGSPRYKAKIFADGECILDFEESEHVVLATHGSLHFGHDAWTNGP 496          
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Match: A0A482RN31_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN31_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-11
Identity = 52/166 (31.33%), Postives = 80/166 (48.19%), Query Frame = 0
Query:  233 SETQGSWSIAFWIYLVDL----------PTASFRG----------------------LFYKGGGG-EMGRTPSAWLCPNSNRIALRVTSETNP----DIGADSIASLGTNTWNHVAFSFKNNTDGN-------FSATIFINGTLDISVGFNE-QNVLSNTGPLHIG 353
            ++  GSW+++ W+++             P AS  G                      LF+KG GG + GRTPSAW+ P+S  + LRV S+  P    D+G  S  ++    W H+AFSF+N++  +       F+  +FI+G LD  + F     + +NTGPL IG
Sbjct:  362 AQNGGSWALSMWLWMASASNEDISTGACPVASDAGTGGEEACPGDSTCARPCRKPRVLFFKGVGGVDQGRTPSAWVAPDSEHLLLRV-SQIAPTQEADVGGRSFGAIPVRRWTHLAFSFENSSAESAQVDAPSFTYRLFIDGELDTQIAFPAGARISANTGPLFIG 526          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJ00_ECTSI2.920e-12857.95Suppressor of lin-12-like protein-related / sel-1 ... [more]
F0XWA6_AURAN1.190e-3332.19Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZY42_9STRA1.730e-2928.98Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A0P1ACA9_PLAHL7.370e-2439.74Extracellular protein SEL-1 and related proteins n... [more]
A0A7S2WID4_9STRA6.880e-1624.44Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A482RN31_9ARCH1.040e-1131.33Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 224..363
e-value: 1.1E-11
score: 47.0
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 236..358
e-value: 1.4E-13
score: 51.3
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 231..358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig1contigC-linearis_contig1:1632590..1634361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig1.114.1mRNA_C-linearis_contig1.114.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig1 1632590..1634361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig1.114.1 ID=prot_C-linearis_contig1.114.1|Name=mRNA_C-linearis_contig1.114.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=365bp
LHSAIQSREYGSFDTPEIRTVEWSSADGESLVLTFSASTNRPRLNDAVSI
NNALMLNHGDIELVAGRGAWSPGGEALTITDLDPENWRHIITAISDGTFH
ATPRKKLLVGAEIWGGDNSSLSSDPPAGQLRGNLTIRMVFPGYFTAHLFV
GERLESTSAQVIEVQLCPNEVVMIAPKHSPPFSSEAPRSVFGADGVLSLP
GDKFLKASLPKHFGVPSSLFAEHQRPPGGGFRSETQGSWSIAFWIYLVDL
PTASFRGLFYKGGGGEMGRTPSAWLCPNSNRIALRVTSETNPDIGADSIA
SLGTNTWNHVAFSFKNNTDGNFSATIFINGTLDISVGFNEQNVLSNTGPL
HIGRDPSNKGPRRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf