prot_C-linearis_contig1.101.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig1.101.1
Unique Nameprot_C-linearis_contig1.101.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length58
Homology
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BLAST of mRNA_C-linearis_contig1.101.1 vs. uniprot
Match: D7G448_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G448_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 3.550e-30
Identity = 51/57 (89.47%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    1 GKCFPPAPLENKGVMFVVYRRLNAGRSLLLATLYDGEDTLVGVGLFFCLKCGGRYIP 57
            GK FPPAPL+NKGVMFVVYRRLNAGRSLLLATLYDGEDT VGVGL FC K GGRYIP
Sbjct:   15 GKSFPPAPLKNKGVMFVVYRRLNAGRSLLLATLYDGEDTSVGVGLVFCSKYGGRYIP 71
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G448_ECTSI3.550e-3089.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig1contigC-linearis_contig1:1471258..1471431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig1.101.1mRNA_C-linearis_contig1.101.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig1 1471258..1471431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig1.101.1 ID=prot_C-linearis_contig1.101.1|Name=mRNA_C-linearis_contig1.101.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=58bp
GKCFPPAPLENKGVMFVVYRRLNAGRSLLLATLYDGEDTLVGVGLFFCLK
CGGRYIP*
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