Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 457 |
| Cds size | 456 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930846.1942296-CDS-C-linearis_contig99:490435..490891 | 1622930846.1942296-CDS-C-linearis_contig99:490435..490891 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 490436..490891 + |
| 1690881279.7108607-CDS-C-linearis_contig99:490435..490891 | 1690881279.7108607-CDS-C-linearis_contig99:490435..490891 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 490436..490891 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17193.1 >prot_C-linearis_contig99.17193.1 ID=prot_C-linearis_contig99.17193.1|Name=mRNA_C-linearis_contig99.17193.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=152bp
MCLPLSHNCCTSVQQNDHHHSRPLTLPRRPVQESKASPSHHYQWFRFTRV
CHTSEGIFTTPLATYREISLAGENASPKRIAHSCSLIYTKAFGSQSGSVA
LVDVTVHTYLRVSQCFFCFLHHCFFIFYFYLHIHITRAFYHGPWSHRRVP
LP back to topmRNA from alignment at C-linearis_contig99:490436..490891+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig99.17193.1 ID=mRNA_C-linearis_contig99.17193.1|Name=mRNA_C-linearis_contig99.17193.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=456bp|location=Sequence derived from alignment at C-linearis_contig99:490436..490891+ (Chordaria linearis ClinC8C monoicous)
ATGTGTCTGCCGTTGAGCCACAACTGCTGCACCTCTGTTCAACAGAATGA
TCACCACCATTCAAGACCGCTCACGCTCCCTAGACGCCCCGTGCAAGAGT
CAAAAGCCTCCCCGTCGCACCACTACCAGTGGTTTCGGTTTACAAGGGTT
TGCCATACTTCTGAGGGCATTTTCACTACTCCACTCGCAACCTACCGGGA
AATCTCGCTGGCCGGAGAAAATGCCTCTCCAAAACGAATCGCACACTCTT
GTAGCCTGATTTATACCAAAGCTTTCGGCTCGCAGTCAGGGTCAGTCGCT
CTCGTCGATGTAACTGTACATACCTACCTCCGGGTGTCGCAATGTTTTTT
TTGTTTTTTACACCATTGTTTTTTTATTTTTTATTTTTATCTTCACATAC
ATATAACCAGAGCTTTTTATCATGGCCCGTGGTCACACAGAAGGGTTCCT
CTCCCT back to topCoding sequence (CDS) from alignment at C-linearis_contig99:490436..490891+ >mRNA_C-linearis_contig99.17193.1 ID=mRNA_C-linearis_contig99.17193.1|Name=mRNA_C-linearis_contig99.17193.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at C-linearis_contig99:490436..490891+ (Chordaria linearis ClinC8C monoicous)
ATGTGTCTGCCGTTGAGCCACAACTGCTGCACCTCTGTTCAACAGAATGA
TCACCACCATTCAAGACCGCTCACGCTCCCTAGACGCCCCGTGCAAGAGT
CAAAAGCCTCCCCGTCGCACCACTACCAGTGGTTTCGGTTTACAAGGGTT
TGCCATACTTCTGAGGGCATTTTCACTACTCCACTCGCAACCTACCGGGA
AATCTCGCTGGCCGGAGAAAATGCCTCTCCAAAACGAATCGCACACTCTT
GTAGCCTGATTTATACCAAAGCTTTCGGCTCGCAGTCAGGGTCAGTCGCT
CTCGTCGATGTAACTGTACATACCTACCTCCGGGTGTCGCAATGTTTTTT
TTGTTTTTTACACCATTGTTTTTTTATTTTTTATTTTTATCTTCACATAC
ATATAACCAGAGCTTTTTATCATGGCCCGTGGTCACACAGAAGGGTTCCT
CTCCCTATGTGTCTGCCGTTGAGCCACAACTGCTGCACCTCTGTTCAACA
GAATGATCACCACCATTCAAGACCGCTCACGCTCCCTAGACGCCCCGTGC
AAGAGTCAAAAGCCTCCCCGTCGCACCACTACCAGTGGTTTCGGTTTACA
AGGGTTTGCCATACTTCTGAGGGCATTTTCACTACTCCACTCGCAACCTA
CCGGGAAATCTCGCTGGCCGGAGAAAATGCCTCTCCAAAACGAATCGCAC
ACTCTTGTAGCCTGATTTATACCAAAGCTTTCGGCTCGCAGTCAGGGTCA
GTCGCTCTCGTCGATGTAACTGTACATACCTACCTCCGGGTGTCGCAATG
TTTTTTTTGTTTTTTACACCATTGTTTTTTTATTTTTTATTTTTATCTTC
ACATACATATAACCAGAGCTTTTTATCATGGCCCGTGGTCACACAGAAGG
GTTCCTCTCCCT back to top
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