Homology
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)
HSP 1 Score: 539 bits (1388), Expect = 1.330e-188
Identity = 280/333 (84.08%), Postives = 293/333 (87.99%), Query Frame = 1
Query: 1 QAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGN-------VISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
+AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQ+IYATIQGD+CMCQASS ELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEAD+EKKMENLYTGQGVGVEEDGDD VDGN V+ +ESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTK YD EDEAKYKEHFASYIENE+TF+D+E+MYKETHKAIREDPSPAPK AFTPDKSFKN VKLTY QRKERVAAKK+EIRAAR AE+E
Sbjct: 7 EAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAAEDE 319
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO)
HSP 1 Score: 406 bits (1044), Expect = 1.170e-136
Identity = 204/324 (62.96%), Postives = 251/324 (77.47%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FV+ KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ Q++Y+ I GD + QA+SKEL RYG VGLKNYAAAYCTGLLVARR+L++LGLD+ +Y G EVDG ++ST+ + + YYVDEVD++K+PF+ LDVG R+TSTG R+FG +KGAADGGLD+PH+EKRFPGYDRDTK YDA++HR+RI+G HV+EYMEYL EED AKY+ HF S++EN+I D +EE+Y+ H+ IREDPSP+ K FTPDKS+K KLT+D+RK RV AKKD +A A+EE
Sbjct: 3 FVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDD---------VYEGN------------TEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADEE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA)
HSP 1 Score: 403 bits (1035), Expect = 2.790e-135
Identity = 210/324 (64.81%), Postives = 248/324 (76.54%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
F +VQK K+YF R+QVK+RRRREGKTDYR RK+L Q KNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS EL RYG VGLKNYAAAYCTGLLVARRLL+++GLDE +Y G EVDG V+STE N +TYYVDEVDE++RPF+ALLDVG R+T+TG R+FG +KGAADGGLDVPH+EKRFPGYDRD K YDAE+HR+RI+G HV EYMEYL EED KYK+ FASYIE EI D +EE+Y+ H+A+REDPS + K AFTPDKSFK KL+YD+RK RV AKKD + A L E++
Sbjct: 3 FCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDE---------VYEGN------------TEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKD-AKKAELEEDD 304
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA)
HSP 1 Score: 403 bits (1036), Expect = 3.000e-135
Identity = 207/309 (66.99%), Postives = 244/309 (78.96%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVA 933
FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV Q+ YAT++GD +CQA+S+EL RYG K GLKNYAAAYCTGLL ARRLL+QLGL E LY GQ +E +G V+ TE +TY+V+EVDE+KRPF+ALLDVGI +TSTG RVFG MKGAADGGLD+PH+EKRFPGYDRD+K +DAE+H D IYGAHV+EYMEYL EEDEA YKEHFA+YIE + +++E+ E HKAIREDPS APKA F P+K +K K TY++RK +VA
Sbjct: 3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC)
HSP 1 Score: 399 bits (1026), Expect = 6.190e-134
Identity = 201/324 (62.04%), Postives = 246/324 (75.93%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FVK K KAYF RYQVKFRRRREG+TDYR RKRL+CQDKNKY SPKYRLVVRFTN V+ Q++Y+ + GD +CQA+SKEL RYG VGLKNYAAAYCTGLL ARRLL+++GLD+ +Y G EVD ++STE + + Y+VDEVDE+KRPF+ LLDVG + T+TG+RVFG +KGAADGGLD+PH+EKRFPG+DRD+K YDA++HR+RI+G HV EYMEYL EED KY+EHFAS+I E+ D +EE+Y+ H+ IREDPSP+PK F+PDKSFK KLT D+RK RV AKKD A A++E
Sbjct: 3 FVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDD---------VYEGNS------------EVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERKARVQAKKDAKNAELAADDE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA)
HSP 1 Score: 398 bits (1022), Expect = 2.580e-133
Identity = 206/324 (63.58%), Postives = 248/324 (76.54%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
F++ +TKAYF RYQVKFRRRREGKTDYRARKRL QDKNKY SPKYRLVVRFTN V+ Q+ YA + GD +CQA S EL RYG VGLKNYAAAYCTGLL ARRLL+++GLDE +Y G EVDG V+STE + +TY+V+EVD++KRPF+ALLDVG + T+TG+R+FG +KGAADGGLDVPH+EKRFPGYDRD K YD+++HR+RI+G HV+EYMEYL EED KYKEHFA YIE ++ D +EE+Y+ H+AIREDPSP+ K F+PDKSFK KLTYD+RK VAAKK AA++AE E
Sbjct: 3 FIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IYEGN------------TEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK----AAKVAELE 301
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS)
HSP 1 Score: 396 bits (1017), Expect = 1.470e-132
Identity = 201/324 (62.04%), Postives = 244/324 (75.31%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ Q+ Y I GD + ASS ELPRYG KVGLKNYAA+YCTGLL ARRLL+++GLD+ +Y G DE+DGNV+ T+ TYYVDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD+K YDA++HR+RI+G HV EYMEYL EED KY+ FA Y+ENE+ D +EE+Y+ H+ IREDPSP+ K AF+PDKSFK KLT ++RK V +KKD A AE+E
Sbjct: 3 FVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDD---------VYEGN------------DEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKDTKNAELEAEDE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA)
HSP 1 Score: 394 bits (1012), Expect = 1.870e-131
Identity = 205/325 (63.08%), Postives = 247/325 (76.00%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS EL RYG VGLKNYAAAYCTGLL ARRLL+++GLD +Y G E+D V+ TE S+G+TY+V+EVD++KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD K YDAE+H++RI+G HV EYMEYL EED KY+EHF YI+ +I D +EE+Y+ H+ IREDPS A K A++PDK+FK KLT QRKERV AKKD A+ AE+E
Sbjct: 21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD---------GVYEGN------------TEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD----AKNAEDE 320
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
K0TJ10_THAOC (Ribosomal_L18_c domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ10_THAOC)
HSP 1 Score: 389 bits (1000), Expect = 5.280e-130
Identity = 202/324 (62.35%), Postives = 240/324 (74.07%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FVK+QK+K+Y+KRYQVKFRRRREGKTDYR RKRL CQ KNKY SPKYR VVRFTN+ V+ Q+ Y I GD + ASS ELPRYG GLKNY AAYCTGLL ARRLL+++GLD+ +Y G DE+DG V+ TE TYYVDEVDE+KRPF+ALLDVG ++TSTG R+FG +KGAADGGLD+PH+EKRFPGYDRD+K YDA++HR+RI+G HV EYMEYL EED KY+E FA YI I D +EE+Y+ H+ IREDPSP+ K +FTPDKSFK KLT +QRK V AKKD A++AE E
Sbjct: 3 FVKIQKSKSYYKRYQVKFRRRREGKTDYRQRKRLCCQAKNKYQSPKYRFVVRFTNRQVICQIAYTLIDGDRILTSASSNELPRYGLSCGLKNYGAAYCTGLLCARRLLQKVGLDD---------VYEGN------------DEIDGEVVKTEVGKTTYYVDEVDEDKRPFRALLDVGCKTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQEQFAGYIAAGIDADGLEELYEGVHEKIREDPSPSEKKSFTPDKSFKRKAKLTLEQRKAAVQAKKD----AKIAELE 301
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match:
A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV)
HSP 1 Score: 389 bits (1000), Expect = 5.470e-130
Identity = 201/324 (62.04%), Postives = 244/324 (75.31%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978
FVKVQ +KAY RYQVK+RRRREG TDYR R+RL QDKNKY SPKYRLVVRFTN+ V+ Q+ Y+ I GD +CQA+S ELPRYG +VGLKNYAAAYCTGLLVARRLL+++GLDE Y G EVDG ++STE +G+ YYVDEVDE+KRPF+ LLDVG R T+TG R+FG +KGAADGGLD+PH EKRFPGYDRD+K YDA++H++RI+G HV EYMEYL EED KY+E FA YIEN++ D +EE+Y+ H+AIREDPSP+ K F+PD S+K KLT ++RK RV AKKD + A L E +
Sbjct: 3 FVKVQHSKAYSSRYQVKYRRRREGCTDYRQRRRLCTQDKNKYQSPKYRLVVRFTNRKVICQIAYSLIDGDRILCQANSDELPRYGLEVGLKNYAAAYCTGLLVARRLLQKVGLDET---------YEGN------------TEVDGEIVSTEVDGKKYYVDEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEYDADMHKERIFGGHVGEYMEYLEEEDNQKYQECFAKYIENDVEADGLEELYEGVHEAIREDPSPSEKKDFSPDNSYKRKAKLTLEERKARVQAKKD-AKKAELEESD 304
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.33e-188 / Id = 84.08 Expect = 1.17e-136 / Id = 62.96 Expect = 2.79e-135 / Id = 64.81 Expect = 3.00e-135 / Id = 66.99 Expect = 6.19e-134 / Id = 62.04 Expect = 2.58e-133 / Id = 63.58 Expect = 1.47e-132 / Id = 62.04 Expect = 1.87e-131 / Id = 63.08 Expect = 5.28e-130 / Id = 62.35 Expect = 5.47e-130 / Id = 62.04 Sequence A0A6H5JCG3_9PHAE A0A1Z5J7J4_FISSO A0A7S2S5W4_9STRA A0A836CBG0_9STRA B7FPQ0_PHATC A0A448Z3Q5_9STRA B5YLN7_THAPS A0A7S0BVS7_9STRA K0TJ10_THAOC A0A7S1YV59_TRICV Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 468.4 Seed ortholog evalue 2.1e-129 Seed eggNOG ortholog 2880.D8LR22 Preferred name RPL5 KEGG ko ko:K02932 KEGG Pathway ko03010,map03010 KEGG Module M00177 Hectar predicted targeting category other localisation GOs GO:0000027,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010921,GO:0010922,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017101,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0023051,GO:0030162,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033036,GO:0033365,GO:0034248,GO:0034250,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035303,GO:0035306,GO:0042176,GO:0042177,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0042886,GO:0043043,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044389,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045727,GO:0045861,GO:0045937,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051336,GO:0051338,GO:0051340,GO:0051345,GO:0051348,GO:0051351,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051716,GO:0055105,GO:0055106,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0070972,GO:0071241,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1902531,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903630,GO:1903632,GO:1904666,GO:1904667,GO:1905015,GO:1905017,GO:1905018,GO:1905020,GO:1905021,GO:1905023,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2000112,GO:2000434,GO:2000435 EggNOG free text desc. 5S rRNA binding EggNOG OGs COG0256@1,KOG0875@2759 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE br01610,ko00000,ko00001,ko00002,ko01009,ko03011 Exons 6 Model size 1577 Cds size 759 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930853.3813891-UTR-C-linearis_contig99:454058..454654 1622930853.3813891-UTR-C-linearis_contig99:454058..454654 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 454059..454654 - 1690881283.350416-UTR-C-linearis_contig99:454058..454654 1690881283.350416-UTR-C-linearis_contig99:454058..454654 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 454059..454654 - 1622930853.5072663-UTR-C-linearis_contig99:457340..457562 1622930853.5072663-UTR-C-linearis_contig99:457340..457562 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 457341..457562 - 1690881283.4248362-UTR-C-linearis_contig99:457340..457562 1690881283.4248362-UTR-C-linearis_contig99:457340..457562 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 457341..457562 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930853.4003863-CDS-C-linearis_contig99:454654..454741 1622930853.4003863-CDS-C-linearis_contig99:454654..454741 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 454655..454741 - 1690881283.3628888-CDS-C-linearis_contig99:454654..454741 1690881283.3628888-CDS-C-linearis_contig99:454654..454741 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 454655..454741 - 1622930853.4158719-CDS-C-linearis_contig99:455161..455392 1622930853.4158719-CDS-C-linearis_contig99:455161..455392 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 455162..455392 - 1690881283.3719976-CDS-C-linearis_contig99:455161..455392 1690881283.3719976-CDS-C-linearis_contig99:455161..455392 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 455162..455392 - 1622930853.4296618-CDS-C-linearis_contig99:455710..455816 1622930853.4296618-CDS-C-linearis_contig99:455710..455816 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 455711..455816 - 1690881283.3806818-CDS-C-linearis_contig99:455710..455816 1690881283.3806818-CDS-C-linearis_contig99:455710..455816 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 455711..455816 - 1622930853.4450788-CDS-C-linearis_contig99:456100..456210 1622930853.4450788-CDS-C-linearis_contig99:456100..456210 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 456101..456210 - 1690881283.3961093-CDS-C-linearis_contig99:456100..456210 1690881283.3961093-CDS-C-linearis_contig99:456100..456210 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 456101..456210 - 1622930853.463213-CDS-C-linearis_contig99:456710..456818 1622930853.463213-CDS-C-linearis_contig99:456710..456818 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 456711..456818 - 1690881283.4064624-CDS-C-linearis_contig99:456710..456818 1690881283.4064624-CDS-C-linearis_contig99:456710..456818 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 456711..456818 - 1622930853.483063-CDS-C-linearis_contig99:457223..457340 1622930853.483063-CDS-C-linearis_contig99:457223..457340 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 457224..457340 - 1690881283.4153466-CDS-C-linearis_contig99:457223..457340 1690881283.4153466-CDS-C-linearis_contig99:457223..457340 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 457224..457340 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17189.1
>prot_C-linearis_contig99.17189.1 ID=prot_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKM back to top mRNA from alignment at C-linearis_contig99:454059..457562-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig99.17189.1 ID=mRNA_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3504bp|location=Sequence derived from alignment at C-linearis_contig99:454059..457562- (Chordaria linearis ClinC8C monoicous)CAGGCCTTCGTCAAGGTCCAGAAGACAAAAGCGTACTTCAAGCGCTACCA
GGTGAAGTTCCGGCGCCGTCGCGAGGGCAAGACCGACTACCGGGCCCGCA
AGAGGTTGATCTGCCAGGACAAGAACAAGTACAACTCCCCCAAGTACCGC
CTGGTGGTGCGCTTCACCAACAAGTACGTGCTGGCGCAGGTCATCTACGC
CACCATCCAGGGCGACCTGTGC ATGTGCCAGGCCTCCTCCAAGGAGCTCC
CCCGGTACGGCTGCAAGGTCGGACTCAAGAACTACGCCGCGGCCTACTGC
ACGGGTCTCCTGGTGGCTCGCCGCCTGCTCCGCCAGCTG GTGAGAGAGAG
GCAGAGAAAGAGAGAGAAGTTTTTGTCGGGTGTCTAATCTAGTCTACCAT
GTGACCCCTCCGTCTGTGCCGGTGTTGTTGCGTACTTGTTTGTTAGACGT
TAAATGTGAAAGTTAATGTTTGGGTTGTTTGTGTGACTGGTGTACTTGTA
CAGAGTTTCCCGAACATCCGGCCTGGCTTGTTGTTCGCGTTGGGTGCTTG
GCGGGATCCGGGCGAAGAGCTGAAGCTGTTCCTCTCCTAGCTTTCAATGG
GAAGCGCGCGCGACGCGATGTCCCGCCTGTGATGCTTGTTCCATTTGTCA
CTCATGCCGAACCAGCCCATTTGTAAACGTTCCCCCTTCCTATCCCCCCG
CCACCGCCGCCATTCCACGTTTGTTTTGTTGTAATTGTTTTCAGGGCCTC
GACGAGGCCGACGAGGAGAAGAAGATGGAGAACCTCTACACCGGTCAGGG
AGTCGGCGTGGAGGAGGACGGCGATGACGACGAGGACGAGGTCGACGGAA
AC GTGAGTGATAACGGTCAATCAATAGTAAAGTACACCATGATATTCAGC
AGTCGCTTCTCTCAAAGAGGGGGACATGGGGAGGCAGCAGCCTCGCTTTT
CTCTTCGAACGACCCGTGGTGGTAGTTGTCGTCCGTCTTTATCGTAGAGA
GGAGCGTGGTTTGAGTGCTCTGCGAAACACGTGGTGCTGTCGTGAACCAC
ATTCCACCGCGCCAACGAGGAGCATTGTTTTCATGTTTTCATGGGCCAAC
CTGGCTGTAGGAAAACTGACGTGTACGGTTGTAGCGTGTCATTTGCCTTC
GGTTTTCCGGAGCGGTCGGAGAGGTGAGTACAGACACTTTCACCAACATC
TACTTGTGGCCGCTCCGGTTTCGAGGCGCTTTTGAGATTTCGCTTGCCAT
GCTCATAAGCTTTTCCCCTTCGTGTCCTGGGCCTTGACATGTTTCCTTTC
GCTCTCTCTCTCTCTCTCGTGTTGTCTTTGTGTTGCATGTCATGTGAAAT
AGGTGATCTCGACCGAGTCGAACGGACGCACGTACTACGTGGACGAGGTA
GACGAGGAAAAGCGGCCCTTCAAGGCCCTCCTCGATGTCGGAATCCGGTC
TACGTCGACGGG GTGAGTACAAGAGGCACCAGACCTTTGTGCGTGCTGAG
CTTTTTTGGTCAGGCCCACCATATGTTTGTATGTTTCAGGGGCGTTCTCT
TGTTTCTTTTCCCCATGCTGTCTGTAGGCTTTAGGGGCGTGCTTTGCTCC
GCCTCGTGCGTGTTTTTTCGTCCCAAAAGTCTGTCTTGTGACTGTTGCAG
GCTGCACGCTCCGCATGTGTGCTTGCCGACGTCTCACAGAACCCTCCCGC
TCATGTGTTATTTTTCGTGTCTTGTTCTCATCGATTCGTGGTGCAGTAAC
CGCGTGTTCGGCTGCATGAAGGGCGCCGCGGACGGTGGCCTGGACGTGCC
CCACAACGAGAAACGCTTCCCCGGCTACGACCGCGACACCAAGTCGTACG
AC GTGAGTCTATTGTAGTCTGTAGAGCGGTAAAGAGTGCCGACGTTTTGC
TGTCGGTTAAGAGTAGATGCCATGCCGCCTGCGAAGGTTGAAGTGTTTTT
TGTCTTGTCTGGTTTTGTCGAGGGCTGAAACACGCGCACAGTTTTGTACT
GGTGCGCATCGTCAAATCCAGCGAGGGGTGTCCCCACTGCCGTTTCTTCA
CACCTAAGTTAGAGTAGCAGTGTTGGCTTTACCCCGTTTTTCCTCTTGTG
TTCTCCCTGTCCTTCTTCTTACTCCTCACCGACCTTTTTATCTCATATGT
TGTTGATGTTGGATCTTCAGGCCGAGCTCCACCGTGACCGCATCTATGGC
GCGCACGTGGCGGAGTACATGGAGTACCTAACCGAGGAAGACGAGGCCAA
GTACAAGGAGCACTTCGCGTCCTACATCGAGAACGAGATCACCTTCGACG
ACGTCGAGGAGATGTACAAGGAGACCCACAAGGCCATCCGCGAGGACCCG
TCCCCGGCCCCCAAGGCGGCCTTCACCCCGGACAAGTCCTTCAAGAACAC
G GTGAGTTGTTACAGTGCAGTCTTGTCGCTTTGGTGGAGCCCTACAAGCA
GACCATGTACTTGTATGTGGATAGATAGCTGTGGTTGTATTGCTTGCAGA
GACGCTCGATTTGTGTGATCGCGTGCGTCCGAGCTCTCTTTCTCTGGTGG
CGCTGTTCATACAAGCAAGATACTCTCATGCCTCCAAGGGTCCGGGTCTG
GTGTGGTTTGCCCCCTTGTGTACTACCCGTTTGAGCAGAGCCCGTTATCC
GATACGCAACGAAACGGGCGTTGCTAGCTATATGCCGTTCGGCGGTCTGC
ACTCTACACCTTTTTGGACATTCAACGCGGTCGTGCTCTGTTGTCTTGCT
TATCCACCGTCTTTCCTGCCTCTTCTGTCTTTTCCGTTGTGGTGTTTTGC
ACCTTACACTTGCACGCACAGGTCAAGCTCACCTACGACCAGCGCAAGGA
GAGGGTCGCCGCCAAGAAGGACGAGATCCGCGCGGCCCGCCTGGCGGAGG
AGGAGTAG ATTTTGAATACGTCATATCCTCTTGCCGTAGCTTTGTGCCAC
TTGTGCCTTTCGGGCTTCGCGCACGGAATACGGGCACCCGATCGGTTGAA
TGCTGTAGTCCTGTGGTGGTTCTTCGGCGTAGGCAACTCAGCGTGGTGAT
CCGGAGTTGTGTCCGGGGGCGGTGTTTGGTGCCCTGGATGCGAATTCCTT
CCTGGGCTGAAATAACAAAGATCTGAGCTATCTTATTGTGAAAGACGGGG
TTGACCCCGTGGTTCTGTTTTGAGGTGTGCGTTGTCGGGTGCACGCTCTC
TCGTTGCGTTCCTGCTCTCTGAGGGGAGGTCCGGCCCGCTTGGTGGCCGT
GGTATTCCTCTGGTATTTTCCCTCGAGAGCTTCGGGCGAAGAGTTCTTTG
CAGTCATGCGCGTTTCGCGAAAACCAGAAATCGCGTTCGTGTCCGTAGCT
CCTCGAGAATATCGTTTCAAAGGGGCTAGAGAACATCATCCACAAAAATC
TGTCGGGTCGCATGGTTGTTCAGCAGAGTACAGGCGCGAAATATCATTCT
ACGTGCTCCGGACCGGTCTAGGTTCACAGGGTCCAATTAAGCGACCCCGG
TCTC back to top Coding sequence (CDS) from alignment at C-linearis_contig99:454059..457562-
>mRNA_C-linearis_contig99.17189.1 ID=mRNA_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at C-linearis_contig99:454059..457562- (Chordaria linearis ClinC8C monoicous) back to top