mRNA_C-linearis_contig99.17189.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 1.330e-188 Identity = 280/333 (84.08%), Postives = 293/333 (87.99%), Query Frame = 1 Query: 1 QAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGN-------VISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 +AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQ+IYATIQGD+CMCQASS ELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEAD+EKKMENLYTGQGVGVEEDGDD VDGN V+ +ESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTK YD EDEAKYKEHFASYIENE+TF+D+E+MYKETHKAIREDPSPAPK AFTPDKSFKN VKLTY QRKERVAAKK+EIRAAR AE+E Sbjct: 7 EAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAAEDE 319
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO) HSP 1 Score: 406 bits (1044), Expect = 1.170e-136 Identity = 204/324 (62.96%), Postives = 251/324 (77.47%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FV+ KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ Q++Y+ I GD + QA+SKEL RYG VGLKNYAAAYCTGLLVARR+L++LGLD+ +Y G EVDG ++ST+ + + YYVDEVD++K+PF+ LDVG R+TSTG R+FG +KGAADGGLD+PH+EKRFPGYDRDTK YDA++HR+RI+G HV+EYMEYL EED AKY+ HF S++EN+I D +EE+Y+ H+ IREDPSP+ K FTPDKS+K KLT+D+RK RV AKKD +A A+EE Sbjct: 3 FVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDD---------VYEGN------------TEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADEE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA) HSP 1 Score: 403 bits (1035), Expect = 2.790e-135 Identity = 210/324 (64.81%), Postives = 248/324 (76.54%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 F +VQK K+YF R+QVK+RRRREGKTDYR RK+L Q KNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS EL RYG VGLKNYAAAYCTGLLVARRLL+++GLDE +Y G EVDG V+STE N +TYYVDEVDE++RPF+ALLDVG R+T+TG R+FG +KGAADGGLDVPH+EKRFPGYDRD K YDAE+HR+RI+G HV EYMEYL EED KYK+ FASYIE EI D +EE+Y+ H+A+REDPS + K AFTPDKSFK KL+YD+RK RV AKKD + A L E++ Sbjct: 3 FCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDE---------VYEGN------------TEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKD-AKKAELEEDD 304
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 403 bits (1036), Expect = 3.000e-135 Identity = 207/309 (66.99%), Postives = 244/309 (78.96%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVA 933 FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV Q+ YAT++GD +CQA+S+EL RYG K GLKNYAAAYCTGLL ARRLL+QLGL E LY GQ +E +G V+ TE +TY+V+EVDE+KRPF+ALLDVGI +TSTG RVFG MKGAADGGLD+PH+EKRFPGYDRD+K +DAE+H D IYGAHV+EYMEYL EEDEA YKEHFA+YIE + +++E+ E HKAIREDPS APKA F P+K +K K TY++RK +VA Sbjct: 3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC) HSP 1 Score: 399 bits (1026), Expect = 6.190e-134 Identity = 201/324 (62.04%), Postives = 246/324 (75.93%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FVK K KAYF RYQVKFRRRREG+TDYR RKRL+CQDKNKY SPKYRLVVRFTN V+ Q++Y+ + GD +CQA+SKEL RYG VGLKNYAAAYCTGLL ARRLL+++GLD+ +Y G EVD ++STE + + Y+VDEVDE+KRPF+ LLDVG + T+TG+RVFG +KGAADGGLD+PH+EKRFPG+DRD+K YDA++HR+RI+G HV EYMEYL EED KY+EHFAS+I E+ D +EE+Y+ H+ IREDPSP+PK F+PDKSFK KLT D+RK RV AKKD A A++E Sbjct: 3 FVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDD---------VYEGNS------------EVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERKARVQAKKDAKNAELAADDE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA) HSP 1 Score: 398 bits (1022), Expect = 2.580e-133 Identity = 206/324 (63.58%), Postives = 248/324 (76.54%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 F++ +TKAYF RYQVKFRRRREGKTDYRARKRL QDKNKY SPKYRLVVRFTN V+ Q+ YA + GD +CQA S EL RYG VGLKNYAAAYCTGLL ARRLL+++GLDE +Y G EVDG V+STE + +TY+V+EVD++KRPF+ALLDVG + T+TG+R+FG +KGAADGGLDVPH+EKRFPGYDRD K YD+++HR+RI+G HV+EYMEYL EED KYKEHFA YIE ++ D +EE+Y+ H+AIREDPSP+ K F+PDKSFK KLTYD+RK VAAKK AA++AE E Sbjct: 3 FIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IYEGN------------TEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK----AAKVAELE 301
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS) HSP 1 Score: 396 bits (1017), Expect = 1.470e-132 Identity = 201/324 (62.04%), Postives = 244/324 (75.31%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ Q+ Y I GD + ASS ELPRYG KVGLKNYAA+YCTGLL ARRLL+++GLD+ +Y G DE+DGNV+ T+ TYYVDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD+K YDA++HR+RI+G HV EYMEYL EED KY+ FA Y+ENE+ D +EE+Y+ H+ IREDPSP+ K AF+PDKSFK KLT ++RK V +KKD A AE+E Sbjct: 3 FVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDD---------VYEGN------------DEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKDTKNAELEAEDE 305
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA) HSP 1 Score: 394 bits (1012), Expect = 1.870e-131 Identity = 205/325 (63.08%), Postives = 247/325 (76.00%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS EL RYG VGLKNYAAAYCTGLL ARRLL+++GLD +Y G E+D V+ TE S+G+TY+V+EVD++KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD K YDAE+H++RI+G HV EYMEYL EED KY+EHF YI+ +I D +EE+Y+ H+ IREDPS A K A++PDK+FK KLT QRKERV AKKD A+ AE+E Sbjct: 21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD---------GVYEGN------------TEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD----AKNAEDE 320
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: K0TJ10_THAOC (Ribosomal_L18_c domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ10_THAOC) HSP 1 Score: 389 bits (1000), Expect = 5.280e-130 Identity = 202/324 (62.35%), Postives = 240/324 (74.07%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FVK+QK+K+Y+KRYQVKFRRRREGKTDYR RKRL CQ KNKY SPKYR VVRFTN+ V+ Q+ Y I GD + ASS ELPRYG GLKNY AAYCTGLL ARRLL+++GLD+ +Y G DE+DG V+ TE TYYVDEVDE+KRPF+ALLDVG ++TSTG R+FG +KGAADGGLD+PH+EKRFPGYDRD+K YDA++HR+RI+G HV EYMEYL EED KY+E FA YI I D +EE+Y+ H+ IREDPSP+ K +FTPDKSFK KLT +QRK V AKKD A++AE E Sbjct: 3 FVKIQKSKSYYKRYQVKFRRRREGKTDYRQRKRLCCQAKNKYQSPKYRFVVRFTNRQVICQIAYTLIDGDRILTSASSNELPRYGLSCGLKNYGAAYCTGLLCARRLLQKVGLDD---------VYEGN------------DEIDGEVVKTEVGKTTYYVDEVDEDKRPFRALLDVGCKTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQEQFAGYIAAGIDADGLEELYEGVHEKIREDPSPSEKKSFTPDKSFKRKAKLTLEQRKAAVQAKKD----AKIAELE 301
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Match: A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV) HSP 1 Score: 389 bits (1000), Expect = 5.470e-130 Identity = 201/324 (62.04%), Postives = 244/324 (75.31%), Query Frame = 1 Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDDEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEEE 978 FVKVQ +KAY RYQVK+RRRREG TDYR R+RL QDKNKY SPKYRLVVRFTN+ V+ Q+ Y+ I GD +CQA+S ELPRYG +VGLKNYAAAYCTGLLVARRLL+++GLDE Y G EVDG ++STE +G+ YYVDEVDE+KRPF+ LLDVG R T+TG R+FG +KGAADGGLD+PH EKRFPGYDRD+K YDA++H++RI+G HV EYMEYL EED KY+E FA YIEN++ D +EE+Y+ H+AIREDPSP+ K F+PD S+K KLT ++RK RV AKKD + A L E + Sbjct: 3 FVKVQHSKAYSSRYQVKYRRRREGCTDYRQRRRLCTQDKNKYQSPKYRLVVRFTNRKVICQIAYSLIDGDRILCQANSDELPRYGLEVGLKNYAAAYCTGLLVARRLLQKVGLDET---------YEGN------------TEVDGEIVSTEVDGKKYYVDEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEYDADMHKERIFGGHVGEYMEYLEEEDNQKYQECFAKYIENDVEADGLEELYEGVHEAIREDPSPSEKKDFSPDNSYKRKAKLTLEERKARVQAKKD-AKKAELEESD 304 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17189.1 >prot_C-linearis_contig99.17189.1 ID=prot_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp MCQASSKELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADEEKKMback to top mRNA from alignment at C-linearis_contig99:454059..457562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17189.1 ID=mRNA_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3504bp|location=Sequence derived from alignment at C-linearis_contig99:454059..457562- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:454059..457562- >mRNA_C-linearis_contig99.17189.1 ID=mRNA_C-linearis_contig99.17189.1|Name=mRNA_C-linearis_contig99.17189.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at C-linearis_contig99:454059..457562- (Chordaria linearis ClinC8C monoicous)back to top |