Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 299 |
| Cds size | 201 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930845.6011-UTR-C-linearis_contig99:444339..444435 | 1622930845.6011-UTR-C-linearis_contig99:444339..444435 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 444340..444435 - |
| 1690881279.474663-UTR-C-linearis_contig99:444339..444435 | 1690881279.474663-UTR-C-linearis_contig99:444339..444435 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 444340..444435 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930845.6192267-CDS-C-linearis_contig99:444435..444539 | 1622930845.6192267-CDS-C-linearis_contig99:444435..444539 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 444436..444539 - |
| 1690881279.489138-CDS-C-linearis_contig99:444435..444539 | 1690881279.489138-CDS-C-linearis_contig99:444435..444539 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 444436..444539 - |
| 1622930845.6335802-CDS-C-linearis_contig99:444679..444776 | 1622930845.6335802-CDS-C-linearis_contig99:444679..444776 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 444680..444776 - |
| 1690881279.5008042-CDS-C-linearis_contig99:444679..444776 | 1690881279.5008042-CDS-C-linearis_contig99:444679..444776 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 444680..444776 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17187.1 >prot_C-linearis_contig99.17187.1 ID=prot_C-linearis_contig99.17187.1|Name=mRNA_C-linearis_contig99.17187.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=67bp
DGKGALRHRQGRERLGLRRPPPGEARPPHPRGGLRHRLRGFETPITHHPS
SRLRGFETPIQPQPLA* back to topmRNA from alignment at C-linearis_contig99:444340..444776- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig99.17187.1 ID=mRNA_C-linearis_contig99.17187.1|Name=mRNA_C-linearis_contig99.17187.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=437bp|location=Sequence derived from alignment at C-linearis_contig99:444340..444776- (Chordaria linearis ClinC8C monoicous)
GATGGAAAAGGCGCCTTACGTCATCGCCAAGGTCGAGAACGCTTGGGCCT
GCGTAGACCTCCTCCGGGAGAAGCACGGCCGCCCCACCCCCGAGGAGGTG
AAGTTCGACGTCGACGTTTATACTGCCACCGTCTCCCTCAAGGCAGGCAC
CCTGGAAAGCGAAGGCAACGCAGTGAGTTTCGCGAGCGAACCCAACCCTG
ACCCCTTAACACAGCTTTCGCCTCTCACTGTCGGCAGGGTTAAGACACCG
TCTGAGGGGGTTCGAGACACCCATCACCCATCACCCATCAAGTCGTCTGA
GGGGGTTCGAGACACCCATCCAACCCCAACCCCTAGCCTAGCTGCGTGCG
CGCGTGTGCAGCTACATGGAGCTGGGAGAGCGTGGAGATCGGAAGCTTTA
TTAGCTGTGATGGAGCTTGCGGGCTAGCTGATTGGAC back to topCoding sequence (CDS) from alignment at C-linearis_contig99:444340..444776- >mRNA_C-linearis_contig99.17187.1 ID=mRNA_C-linearis_contig99.17187.1|Name=mRNA_C-linearis_contig99.17187.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at C-linearis_contig99:444340..444776- (Chordaria linearis ClinC8C monoicous)
GATGGAAAAGGCGCCTTACGTCATCGCCAAGGTCGAGAACGCTTGGGCCT
GCGTAGACCTCCTCCGGGAGAAGCACGGCCGCCCCACCCCCGAGGAGGAT
GGAAAAGGCGCCTTACGTCATCGCCAAGGTCGAGAACGCTTGGGCCTGCG
TAGACCTCCTCCGGGAGAAGCACGGCCGCCCCACCCCCGAGGAGGGTTAA
GACACCGTCTGAGGGGGTTCGAGACACCCATCACCCATCACCCATCAAGT
CGTCTGAGGGGGTTCGAGACACCCATCCAACCCCAACCCCTAGCCTAGGG
TTAAGACACCGTCTGAGGGGGTTCGAGACACCCATCACCCATCACCCATC
AAGTCGTCTGAGGGGGTTCGAGACACCCATCCAACCCCAACCCCTAGCCT
AG back to top
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