mRNA_C-linearis_contig99.17173.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A6H5KYM4_9PHAE (MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM4_9PHAE) HSP 1 Score: 893 bits (2308), Expect = 1.460e-302 Identity = 683/1212 (56.35%), Postives = 750/1212 (61.88%), Query Frame = 3 Query: 345 MPEWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPE-EDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERW------NNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQMFLEKTYGSAYSTDRDRGPAENKKRAPXXXXXXXXXXXXXXXXXXGKASRNKPEKSQSSSPAGERFDLSRGDVGSALRAVRSGKTATTLGRPKGSATTSKXXXXXXXXXXXPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-----KKVGAQSKTSKSXXXXXXXXXXXXTTAPKKPATAPXXXXXXXXXXXXXXKRSRP-RAGLIDAANAAFEGAESNTEEERSFWGRAGDAGSDN-DSDGRDADGE---------RGWGGA--ATPSVFDSRICPKLQDMGAGGTGGKRSSMEAELGESPRPGRRERVSVRPDFLGPREGDDWAVMRQETTSTPSNKSVL--SSTDMLSPTALETKLIASYDAGSDNSLLPTLSPFSQTSRLGYASPSRDSGA--FSRSLLSPPRSAGKAAYGXXXXXXXXXXXXXSGRVWPSSLPYRPATLEGHAGGSDSLSPSAARLSHSPLSPLPPVGGGGLGMLHLREKVWASPAKGGXXXXXXXXXRRDKTGVKCGAQQEGAXXXXXXXXXXPTPSKSPRSCDWKVAVGDSEQRFFAAAADARDAATAVTPGEVREMA-KRSGRSDG--DRQPSSPGGDPFESWGR-ERGGSWGGGGEPRSASATRNGSDRQRRSSRGGRSSWSCSNDXXXXXXXXXHPAAFTPSGGGEHQDLDLDHAPKCLETPRALSHTTPSPATAVRDMTDMDTAADTDDTLLAAASLVSFQKPRAAEAPRLKGPLGTSALRVTLGTPVVSAGAPSISSSVQAKLSLPRTTPTPTPALTPSDSGVQTPA------------------DPMETAYRAAGLAVGPGGXXXXXRSQXXXXXXXXSAAKSETSLLKSAR-HGMFDAVSPTAPVEESGTPYSVCRVDRNGRPNGNSTP-AAASAEQKKGHGGQTDSGDVKAEPLKRGPASGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSAARTAGWSGSGAGPWATPPPMA----MGTPCSGSRFRSAGD-EESDYSDYETYCSVKPTPSKRLPSPPSATKRLFADVGD 3806
MP+WTKDED LE+LV AASG EIDWD+IS VL NGR G QC SRWQKVLH QTIKG WTPE ED+KMVELVGLFGPKRWSAISQRFPGRIGKQCRERW NNHLDPALSKAPWSE EDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQ++LEKTYGSAY ++G K A +A+++K KS + P G RFDL RGDV SALRAVRSGK A +GRPKGS+ +SK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KK A +K XXXXXXXXXXXX K KRSRP G ++ A +S ++E+ FW +AGD S++ D DG +G R W GA A+ SVFD R + G GG GKRSS+EA L SPRP RR+RV + DF+ RE DWA ++ +TPS K L SSTD LSP ALETKLIASYDAGSD+S+LPTLSPFSQTSRLGYASPSRD G F RSLLSPPRSAGK YG GRVW SS P PATL HAG S + S AAR S LSP P GGGGLGMLHLR+K WASP +G ++ G K A+ +G PTPSKSPRS DWK AVGDSE+RFFAAAA A AA A+TPGE REMA KRSGR G RQ +S GDPF WGR ERG S + R A+A ++ + +S SSWSC TP G + PKCL TP A SHTTPSP D +D D DTL AAASLVSFQKPR EAPRLKGPLGTSALRVTLGTPVVS G PSISSSVQAKLSLPRT+P P PS +T DPMETAYRAAGL VG XX XXXXXX A +E KS +GMFDAVSPTAPV+ESGTPYSVCRVDR GR N +TP AAASAEQK HG XXXXXX AAR +GW GS +GPWATPPPMA MGTPCSGS+FRSA D EESDYSDYETYCSVKPTP+KR+ SPPSATKRLFADVGD
Sbjct: 1 MPKWTKDEDSQLEQLVVAASGAEIDWDNISQVLDNGRTGAQCCSRWQKVLHPQTIKGAWTPEVEDQKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWVSATSWNNHLDPALSKAPWSEEEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQVYLEKTYGSAYGDVPEQGQPSGKAEATPSPLLIGGESGGKGKKR--RAAKHKLNKSATFVPEGGRFDL-RGDVDSALRAVRSGKAAGAVGRPKGSSNSSKRVSSAAKKETKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKKKTSAGAKRVXXXXXXXXXXXXXXXXRKKT-------------------KRSRPGTGGAVELGGTA----QSTSDEDPRFWDKAGDENSESEDRDGVGTEGGGGVDADCKGRSWCGATGASSSVFDFR---RDHPGGKGGGSGKRSSVEAGLAGSPRPDRRDRVGIHADFMMARECHDWAASMRDNANTPSKKPNLTGSSTDTLSPIALETKLIASYDAGSDSSILPTLSPFSQTSRLGYASPSRDGGGGQFGRSLLSPPRSAGKLMYGSEG----------GGRVWSSS-PNGPATLGSHAGSSSTDSLEAARFS---LSPFPRSGGGGLGMLHLRDKAWASPIRGNRAAGREGGHAEERDG-KGVAKDKGPQQQELVGGGLPTPSKSPRSRDWKAAVGDSEKRFFAAAA-ANGAAAAITPGEAREMAAKRSGRVGGGDQRQSTSSPGDPFGPWGRRERGESRD---DARDAAAGKDREGHRVETS----SSWSCDKSEQEREDT-------TPPG--------VPRNPKCLGTPCAPSHTTPSPPATSTDTSDAD------DTLQAAASLVSFQKPRVGEAPRLKGPLGTSALRVTLGTPVVSTGTPSISSSVQAKLSLPRTSP---PRGCPSFPDKETGGXXXXXXXXXXXXVAAGLRDPMETAYRAAGLEVGSSAEGGXXXXXXXXXXXSFLGASAEAVKRKSGPCNGMFDAVSPTAPVQESGTPYSVCRVDRKGRRN--ATPHAAASAEQKTEHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXATCVAEPLCHTPLKPAAAGRAAAPEA--AARASGWLGSVSGPWATPPPMAVNMTMGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPTKRVLSPPSATKRLFADVGD 1132
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: D7G7U2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U2_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 8.460e-167 Identity = 399/737 (54.14%), Postives = 433/737 (58.75%), Query Frame = 3 Query: 1734 PREGDDWAVMRQETTSTPSNKSVL--SSTDMLSPTALETKLIASYDAGSDNSLLPTLSPFSQTSRLGYASPSRDS--GAFSRSLLSPPRSAGKAAYGXXXXXXXXXXXXXSGRVWPSSLPYRPATLEGHAGGSDSLSPSAARLSHSPLSPLPPVGGGG----LGMLHLREKVWASPAKGGXXXXXXXXXRRDKTGVKCGAQQEGAXXXXXXXXXXPTPSKSPRSCDWKVAVGDSEQRFFAAAADARDAATA---VTPGEVREMA-KRSGRSDGDRQPSSPG--GDPFESWGR-ERGGSWGGGGEPRSASATRNGSDRQRRSSRGGRSSWSCSNDXXXXXXXXXHPAAFTPSGGGEHQDLDLDHAPKCLETPRALSHTTPSPATAVRDMTDMDTAADTDDTLLAAASLVSFQKPRAAEAPRLKGPLGTSALRVTLGTPVVSAGAPSISSSVQAKLSLPRTTPTPTPALTPSD-----------------SGVQTPADPMETAYRAAGLAVGPGGXXXXXRSQXXXXXXXXSAAKSETSLLKSARHGMFDAVSPTAPVEESGTPYSVCRVDRNGRPNGNSTPAAASAEQKKGHGGQTDSGDVKAEPLKRGPASGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GSAARTAGWSGSGAGPWATPPPMAM----GTPCSGSRFRSAGD-EESDYSDYETYCSVKPTPSKRLPSPPSATKRLFADVGDGDTGFVRR 3830
PRE DDWA ++T++TPS K L SSTD LSP ALETKLIASYDAGSD+S+LPTLSPFSQTSRLGYASPSRD G F RSLLSPPRSAGK YG GRVW SS P PATL HAG S + S AAR S LSP P GG LGMLHLR+K WASP +G ++ G K A+ +G PTPSKSPRS DWK AVGDSE+RFF +TP E REMA KRS R G Q SP GDPF SWGR ERGGS G A G DR+ SSWSC TP G H PKCL TPRA SHTTPSP D A+D DDTL AAASLVSFQKPR EAPRLKGPLGTSALRVTLGTPVVS G PSISSSVQAKLSLPRT+P P P+ +G++ DPMETAYRAAGL VG XX XXXXXXX A+ +GMFDAVSPTAPV+ESGTPYSVCRV+R GRPN + PAAASA+QK HG XXXXXXX G AAR +GWSGS +GPWATPPPM+M GTPCSGS+FRSA D EESDYSDYETYCSVKPTPSKR+ SPPSATKRLFADVGD +TG VRR
Sbjct: 3 PRECDDWAASMRDTSNTPSKKPNLTGSSTDTLSPIALETKLIASYDAGSDSSILPTLSPFSQTSRLGYASPSRDGNGGQFGRSLLSPPRSAGKLMYGSGGR----------GRVWSSS-PNGPATLGSHAGSSSTDSLEAARFS---LSPFPRSGGXXXXXXLGMLHLRDKAWASPVRGDRAAGKEGGHAEERDG-KGVAKDKGPQQQGLVGGGLPTPSKSPRSRDWKAAVGDSEKRFFXXXXXXXXXXXXXXXITPEEAREMAAKRSWRVGGGDQRQSPASPGDPFGSWGRRERGGSRDG------ARDAAGGKDREAHRVETS-SSWSCDKSEQEREDT-------TPPGVPRH--------PKCLGTPRAPSHTTPSPPATSTD------ASDADDTLQAAASLVSFQKPRLGEAPRLKGPLGTSALRVTLGTPVVSTGTPSISSSVQAKLSLPRTSPPRGPPSFPAKETGGXXXXXXXXXXXXAAGLR---DPMETAYRAAGLEVGSSAEGGXXXXXXXXXXXXLGASAEAVKRKSGPSNGMFDAVSPTAPVQESGTPYSVCRVERKGRPNA-TPPAAASADQKTEHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATCGAEPLCHTPLKPAAAGRAAAPGMAARASGWSGSVSGPWATPPPMSMNMTMGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPSKRVLSPPSATKRLFADVGDAETGLVRR 692
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: D7G7U3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U3_ECTSI) HSP 1 Score: 266 bits (680), Expect = 5.260e-79 Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 345 MPEWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGR 764
MP+WTKDED L++LV AASG EIDWD+IS VL NGR G QC SRWQKVLH QTIKG WTPEED+KMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSE EDRIIIETQAIHGNKWAEMSRLLPGR
Sbjct: 1 MPKWTKDEDSQLQQLVVAASGAEIDWDNISQVLDNGRTGVQCCSRWQKVLHPQTIKGAWTPEEDQKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEEEDRIIIETQAIHGNKWAEMSRLLPGR 140
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A835YVM5_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM5_9STRA) HSP 1 Score: 189 bits (480), Expect = 4.570e-51 Identity = 88/174 (50.57%), Postives = 116/174 (66.67%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGE---EIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQMFLEKTYGSAYSTDR 863
+WTK ED L++LV E + W IS +G R QC RWQK L+ KG WT EED K++E+V G ++W+ I+ PGR+GKQCRERW+NHL+P + K PW EDR+IIE Q+ +GNKWAEMS+ LPGRTDN IKN WNSS+KR + +L+ YGS +++ R
Sbjct: 4 KWTKAEDAELKKLVEECQAEGWKKSSWKTISDGMGE-RTETQCQHRWQKALNPTVAKGPWTAEEDAKVIEVVIQHGAQKWTKIASFLPGRVGKQCRERWHNHLNPDVKKEPWRADEDRVIIEKQSEYGNKWAEMSQFLPGRTDNAIKNRWNSSLKRHIAAYLKAKYGSEFTSAR 176
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A8D0FZ66_SPHPU (MYB proto-oncogene like 1 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0FZ66_SPHPU) HSP 1 Score: 189 bits (480), Expect = 8.580e-51 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQ 818
+WT+DED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDRII E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++
Sbjct: 36 KWTRDEDDKLKKLVEQHGKD--DWTFIASHLQNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE 188
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A663MSR3_ATHCN (MYB proto-oncogene like 1 n=2 Tax=Strigidae TaxID=30459 RepID=A0A663MSR3_ATHCN) HSP 1 Score: 189 bits (479), Expect = 9.990e-51 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQ 818
+WT+DED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDRII E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++
Sbjct: 35 KWTRDEDERLKKLVEQNGTD--DWAFIASHLQNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE 187
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A8B9TI56_ANAPL (MYB proto-oncogene like 1 n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=A0A8B9TI56_ANAPL) HSP 1 Score: 189 bits (479), Expect = 1.030e-50 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQ 818
+WT+DED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDRII E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++
Sbjct: 37 KWTRDEDERLKKLVEQNGTD--DWAFIASHLQNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE 189
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A1L1RYE3_CHICK (Myb-related protein A n=2 Tax=Gallus gallus TaxID=9031 RepID=A0A1L1RYE3_CHICK) HSP 1 Score: 188 bits (478), Expect = 1.090e-50 Identity = 88/171 (51.46%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQMFLEKTYGSAYSTDR 863
+WT+DED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDR+I E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++ G+ S++R
Sbjct: 37 KWTRDEDEKLKKLVEQNGTD--DWAFIASHLQNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGTKSSSER 204
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A8C5T8X0_9PASS (MYB proto-oncogene like 1 n=2 Tax=Passeriformes TaxID=9126 RepID=A0A8C5T8X0_9PASS) HSP 1 Score: 189 bits (479), Expect = 1.240e-50 Identity = 87/164 (53.05%), Postives = 121/164 (73.78%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQM--FLEKT 836
+WT++ED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDRII E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++ +L++T
Sbjct: 35 KWTREEDERLKKLVEQNGTD--DWAFIASHLKNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQRT 195
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Match: A0A8C6ZPR8_NOTPE (MYB proto-oncogene like 1 n=3 Tax=Aves TaxID=8782 RepID=A0A8C6ZPR8_NOTPE) HSP 1 Score: 189 bits (479), Expect = 1.370e-50 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 351 EWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLHLQTIKGTWTPEEDRKMVELVGLFGPKRWSAISQRFPGRIGKQCRERWNNHLDPALSKAPWSEGEDRIIIETQAIHGNKWAEMSRLLPGRTDNHIKNHWNSSMKRRLQ 818
+WT+DED L++LV + DW I++ L N D QC RWQKVL+ + IKG WT EED++++ELV +GPKRWS I++ GRIGKQCRERW+NHL+P + K+ W+E EDRII E GN+WAE+++LLPGRTDN IKNHWNS+M+R+++
Sbjct: 37 KWTRDEDEKLKKLVEQNGTD--DWTFIASHLQNRSDF-QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE 189 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17173.1 >prot_C-linearis_contig99.17173.1 ID=prot_C-linearis_contig99.17173.1|Name=mRNA_C-linearis_contig99.17173.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1164bp MPEWTKDEDGHLERLVTAASGEEIDWDHISTVLGNGRDGPQCSSRWQKVLback to top mRNA from alignment at C-linearis_contig99:345577..353990+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17173.1 ID=mRNA_C-linearis_contig99.17173.1|Name=mRNA_C-linearis_contig99.17173.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8414bp|location=Sequence derived from alignment at C-linearis_contig99:345577..353990+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:345577..353990+ >mRNA_C-linearis_contig99.17173.1 ID=mRNA_C-linearis_contig99.17173.1|Name=mRNA_C-linearis_contig99.17173.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6984bp|location=Sequence derived from alignment at C-linearis_contig99:345577..353990+ (Chordaria linearis ClinC8C monoicous)back to top |