mRNA_C-linearis_contig99.17163.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig99.17163.1

>prot_C-linearis_contig99.17163.1 ID=prot_C-linearis_contig99.17163.1|Name=mRNA_C-linearis_contig99.17163.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=606bp
MTRVGLAATFRFVPFVPSPCEGEGGGEGGQEATDTDTFERCWSTLESFLL
FHLSKGVEHIFLYADDDRGGNDVYIEKVADFFNKSQVSVDVRNESQRERQ
QATCRLWSQLGSFSATEVPARQSLNAEDAMRRAGEMRLDWLLHLDIDELF
FTSEPCIQPHFDRLNKLGVEQMTYANHEAVPLREDVRDYFREVSTFKVNH
LLLPLTHEVGERSRFWRRRSRHGQYMLAYDNGKSAVRVFPGRVVPQSVHR
WRRLKAGEREGESTLDPVLDPPRQASGGDVTVTDVVLPSVQGHGQEEACS
TSTSTGKQSVSAVCDGSASNNSETFGGWLTSPAQKEGGDDSDHDQLVNRV
AMADPRELRFDEVLECSDPCVLHYPSCGLSWLRDKYHLLGSFPSSWFDGK
LPIAPCFHLDARDAIHAGEGEKGAPVSPDDGDGMSECLGVGFGDGGDGGR
ALYRNEVMLCPDEHSEEMQAQLEHGVLRVIDGPARLIQQALDARASPGSK
ITPDILSTAAEGARLGSQAEGSSASDHVVGKKVAGRNPTDSSSMTMTAAS
RLVGAMLPGTAAAPTAPVVGQEGDQGGDGDARPAQDSGGSVDSAWILAAC
AREFL*
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mRNA from alignment at C-linearis_contig99:262444..266197-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig99.17163.1 ID=mRNA_C-linearis_contig99.17163.1|Name=mRNA_C-linearis_contig99.17163.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3754bp|location=Sequence derived from alignment at C-linearis_contig99:262444..266197- (Chordaria linearis ClinC8C monoicous)
CTTGCTCGGCTGCCCTCTGTGTGGTTCTTCTCTTTCGGCCGGCACCGACC ACGCTGACCGGCTGAGGTGCGTGCCTGTTTTGAGTCGATAGGTTCATGTA GAGAATATTGCGTGTCTGGCTATGCTGTGGTTGACCACGCACCGCTGATG AAGGGGATCGCTTGTTCTTCCAGCAATTCGAGGGAGGGTATCTACATGCA CAGCAGCTGGCAGCAAGCAGTAGTCTAGGTTATCAGCGCCCGGCTTCTCA GTGTTCAGTATTCTAGGGCTACGCAACTGCGAGAACAACACGCAAAATTT CCCACACAACCAACTAAAGAGCGTTGTAGGGGAGGTTTATGGGGTTTTCC CAGTTTTAGGTGTTTTTCTTCTCGACCTATCCCATATTATACGCCAGTCA CTGCTACTCTGTACCAATATTGAACTGCTGTTACTCCACCACTCAGGGAT TTGTTTCTTTCGGGCTTCTACTTCTTCGTCGCCCTGCTTGTGACGGCCCC CAGGTCCGACTGAACACGGGCACGGGTTTTGCAGAGCATTTGTAGACACC GATATCATGACGAGAGTTGGCTTGGCTGCCACTTTTCGGTTCGTCCCCTT CGTCCCCTCACCCTGCGAGGGAGAGGGAGGGGGAGAGGGAGGACAGGAGG CGACCGATACTGATACGTTTGAGAGGTGCTGGTCGACCCTGGAGTCGTTT TTGCTGTTCCACCTGTCGAAGGGCGTTGAACACATCTTTCTCTACGCAGA CGATGATCGCGGCGGCAACGACGTCTACATAGGTTAGTCTACATGTGAGA GGGTTGCAGGTTAAGGATAATCGTCCACAGCCAATGCCGGCGGGGGTGGC GCTAGCTACATAGCTGAATCCGCCTTTCGCTTACTCAGATCCATCAACCG TATCATCATCAGTTGCTATCATATCTGTATGCTCTTGTTTCCTCTTACAT CGATTTGCAGAGAGACAAGACGAACGTAAGATAAGCGAGGTGGTGAGCAT TCCCGAAATCAGCTCTCTTCAATTGGTGTAGCATGACTCTGAAGTATTAT TATTGCTTACATTTCTGTGTGACGGATACTTGCTTGCTGCATTCGTGTGC GGATCGATGTGTCCTATCCGTGTTTCCTCCCACAGAAAAAGTCGCTGATT TTTTCAACAAGTCGCAGGTTAGCGTCGATGTCCGCAACGAATCACAGGTG AGATTTATCTGCGAGTGATGTTCCTTGGTGAGGTTTGATTGGTTCCTTCT ACTTGGTCCTGGTCAGGAATGTTTATGTTAATGTTGGCATCGGTTTGGTT AGTTTCGAGTGATGATTTGTTTTCTGGCGAACACTTGCATTGCTAGCATC TTTGCGTGAAGCCTGGGCATAAAATGCCAAGCATTGCTTTGTGTGGGTGT TCTTTTGACGCAAAAAATAAACCGTGGATTGATTGCTCTTGCTCAGTGGC AAACCCTTGCTTGCCTGCCTTACGTCTTGGCTCTGCCTGTCGCTCTCTCT CGTAGAGAGAACGTCAGCAAGCCACCTGTCGGCTCTGGAGCCAGCTTGGA TCGTTCAGCGCAACAGAAGTACCCGCTAGGCAGAGCCTGAACGCGGAGGA TGCCATGCGGAGAGCGGGCGAGATGCGGTTGGATTGGCTGTTGCATCTAG ACATCGACGAGGTGAGCGTTCAGGCACCACGAACCACATTTCACTTATAT GCTCCGTGTTGAGATTTGCCGTGTGCAATCTACAAATATTGGCTCGGTTT CGCAACCTTTGTTTTTTCTTGGCCTCTCTTCGACGACTTTCAAACAGCTA GCTCTGCTACACCTCAAAATGACCACGAGGTTGCTTTGTGGTCCCCAAAA GTTGTATGATACGTATGGAGAAATTGCTTTCACGTCTATCAGGCGTTAGG CAAGCCAAGACGTTGAGCTCGGCCGGCAACTAAATTCACTGCAGTTTAGT GGAATGTATGAGTTACGGCGAACACCCATCAAGCCCTCGCCAACCCCAAT AATTCGCACCGTTTTCGGGACGCCTGTCTCCCTCTCTCTCTCGCCCTCCC CCCCTCTCTCTCTCACTCTCTGTGTGTGTGTGTGTGTTGCGCGGTTGAAC AACAGCTTTTCTTTACGTCAGAGCCGTGTATTCAGCCGCACTTCGACCGT CTCAACAAGCTGGGCGTCGAACAGATGACGTACGCCAACCACGAGGCCGT GCCCTTGCGAGAGGACGTGCGAGACTACTTCAGGGAAGTGAGCACGTTCA AGGTCAACCACCTCTTGTTGCCGCTAACCCACGAGGTGGGGGAGAGAAGT CGCTTTTGGCGCCGTCGAAGCAGGCACGGGCAGTACATGCTGGCTTACGA CAACGGGAAGAGCGCGGTGAGGGTTTTCCCTGGGAGAGTCGTGCCTCAGA GCGTGCACCGCTGGAGAAGGCTCAAGGCAGGAGAGAGAGAAGGCGAGAGC ACGCTTGACCCTGTGCTTGACCCTCCCCGACAGGCTTCCGGCGGAGACGT GACGGTGACCGACGTGGTCTTGCCTTCAGTACAAGGCCATGGGCAGGAGG AGGCGTGCAGCACAAGTACCAGTACAGGCAAGCAGAGTGTGTCAGCAGTA TGCGATGGGAGTGCCAGCAACAACAGCGAAACGTTTGGAGGCTGGTTAAC AAGCCCGGCCCAGAAGGAGGGTGGGGATGACTCTGACCATGACCAACTCG TCAACCGGGTGGCGATGGCGGACCCCCGGGAGTTGCGCTTCGACGAGGTT CTGGAGTGTAGCGACCCGTGCGTGCTTCACTACCCCAGCTGCGGCTTGAG TTGGCTGCGGGACAAGTACCATCTGCTGGGGAGTTTCCCTTCCTCGTGGT TCGACGGGAAGCTGCCGATCGCGCCGTGCTTCCATCTTGATGCCCGCGAC GCCATTCACGCAGGGGAAGGAGAGAAAGGAGCACCCGTCTCGCCAGACGA CGGGGATGGCATGAGCGAATGTCTTGGTGTTGGTTTTGGAGATGGCGGGG ATGGGGGGAGGGCCCTCTACCGCAACGAGGTGATGCTGTGTCCGGACGAG CACTCGGAGGAGATGCAAGCGCAGCTGGAGCACGGAGTGTTGCGGGTGAT CGACGGGCCGGCGAGGCTCATCCAGCAAGCTCTCGACGCCCGAGCCTCCC CCGGGTCAAAGATAACGCCTGATATATTGTCGACGGCAGCGGAAGGCGCA CGGCTGGGTAGTCAGGCGGAAGGGTCGAGCGCGTCAGACCATGTAGTGGG GAAAAAAGTGGCGGGCCGGAATCCCACGGACTCGTCGTCGATGACAATGA CCGCGGCCTCACGTCTAGTAGGGGCAATGCTTCCGGGAACCGCCGCAGCG CCGACGGCTCCTGTGGTAGGACAAGAAGGAGATCAAGGAGGTGATGGAGA TGCCAGACCTGCCCAGGATTCCGGTGGGAGCGTGGACAGCGCATGGATCC TTGCAGCGTGTGCTCGGGAGTTCTTGTAGAAAGTTTCTGTATGCCCGTGT TGAGATTCATCACCTACTTTACGAATGAACCAAGGGAAACGGTGGCGAGA TTCCACGTCAACGCAGAGCGCGTGCTGCTGCTGCGAAGTGCAGTCAGTGA GAGCGTCCAGTCCATTGAGTTATTTGTTATTTCCGACTGTAACGTGGCGG GATTTATTTCGGGTGGCGAGGTGATCGGAGCGTTTGTGTCGCCACAGCAG TCCTGCCGAACCTTTGGAGGCCTTAATGCTTTGTAGCCTTGCATGAAAGT GAGC
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Coding sequence (CDS) from alignment at C-linearis_contig99:262444..266197-

>mRNA_C-linearis_contig99.17163.1 ID=mRNA_C-linearis_contig99.17163.1|Name=mRNA_C-linearis_contig99.17163.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at C-linearis_contig99:262444..266197- (Chordaria linearis ClinC8C monoicous)
ATGACGAGAGTTGGCTTGGCTGCCACTTTTCGGTTCGTCCCCTTCGTCCC
CTCACCCTGCGAGGGAGAGGGAGGGGGAGAGGGAGGACAGGAGGCGACCG
ATACTGATACGTTTGAGAGGTGCTGGTCGACCCTGGAGTCGTTTTTGCTG
TTCCACCTGTCGAAGGGCGTTGAACACATCTTTCTCTACGCAGACGATGA
TCGCGGCGGCAACGACGTCTACATAGATGACGAGAGTTGGCTTGGCTGCC
ACTTTTCGGTTCGTCCCCTTCGTCCCCTCACCCTGCGAGGGAGAGGGAGG
GGGAGAGGGAGGACAGGAGGCGACCGATACTGATACGTTTGAGAGGTGCT
GGTCGACCCTGGAGTCGTTTTTGCTGTTCCACCTGTCGAAGGGCGTTGAA
CACATCTTTCTCTACGCAGACGATGATCGCGGCGGCAACGACGTCTACAT
AGAAAAAGTCGCTGATTTTTTCAACAAGTCGCAGGTTAGCGTCGATGTCC
GCAACGAATCACAGAAAAAGTCGCTGATTTTTTCAACAAGTCGCAGGTTA
GCGTCGATGTCCGCAACGAATCACAGAGAGAACGTCAGCAAGCCACCTGT
CGGCTCTGGAGCCAGCTTGGATCGTTCAGCGCAACAGAAGTACCCGCTAG
GCAGAGCCTGAACGCGGAGGATGCCATGCGGAGAGCGGGCGAGATGCGGT
TGGATTGGCTGTTGCATCTAGACATCGACGAGAGAGAACGTCAGCAAGCC
ACCTGTCGGCTCTGGAGCCAGCTTGGATCGTTCAGCGCAACAGAAGTACC
CGCTAGGCAGAGCCTGAACGCGGAGGATGCCATGCGGAGAGCGGGCGAGA
TGCGGTTGGATTGGCTGTTGCATCTAGACATCGACGAGCTTTTCTTTACG
TCAGAGCCGTGTATTCAGCCGCACTTCGACCGTCTCAACAAGCTGGGCGT
CGAACAGATGACGTACGCCAACCACGAGGCCGTGCCCTTGCGAGAGGACG
TGCGAGACTACTTCAGGGAAGTGAGCACGTTCAAGGTCAACCACCTCTTG
TTGCCGCTAACCCACGAGGTGGGGGAGAGAAGTCGCTTTTGGCGCCGTCG
AAGCAGGCACGGGCAGTACATGCTGGCTTACGACAACGGGAAGAGCGCGG
TGAGGGTTTTCCCTGGGAGAGTCGTGCCTCAGAGCGTGCACCGCTGGAGA
AGGCTCAAGGCAGGAGAGAGAGAAGGCGAGAGCACGCTTGACCCTGTGCT
TGACCCTCCCCGACAGGCTTCCGGCGGAGACGTGACGGTGACCGACGTGG
TCTTGCCTTCAGTACAAGGCCATGGGCAGGAGGAGGCGTGCAGCACAAGT
ACCAGTACAGGCAAGCAGAGTGTGTCAGCAGTATGCGATGGGAGTGCCAG
CAACAACAGCGAAACGTTTGGAGGCTGGTTAACAAGCCCGGCCCAGAAGG
AGGGTGGGGATGACTCTGACCATGACCAACTCGTCAACCGGGTGGCGATG
GCGGACCCCCGGGAGTTGCGCTTCGACGAGGTTCTGGAGTGTAGCGACCC
GTGCGTGCTTCACTACCCCAGCTGCGGCTTGAGTTGGCTGCGGGACAAGT
ACCATCTGCTGGGGAGTTTCCCTTCCTCGTGGTTCGACGGGAAGCTGCCG
ATCGCGCCGTGCTTCCATCTTGATGCCCGCGACGCCATTCACGCAGGGGA
AGGAGAGAAAGGAGCACCCGTCTCGCCAGACGACGGGGATGGCATGAGCG
AATGTCTTGGTGTTGGTTTTGGAGATGGCGGGGATGGGGGGAGGGCCCTC
TACCGCAACGAGGTGATGCTGTGTCCGGACGAGCACTCGGAGGAGATGCA
AGCGCAGCTGGAGCACGGAGTGTTGCGGGTGATCGACGGGCCGGCGAGGC
TCATCCAGCAAGCTCTCGACGCCCGAGCCTCCCCCGGGTCAAAGATAACG
CCTGATATATTGTCGACGGCAGCGGAAGGCGCACGGCTGGGTAGTCAGGC
GGAAGGGTCGAGCGCGTCAGACCATGTAGTGGGGAAAAAAGTGGCGGGCC
GGAATCCCACGGACTCGTCGTCGATGACAATGACCGCGGCCTCACGTCTA
GTAGGGGCAATGCTTCCGGGAACCGCCGCAGCGCCGACGGCTCCTGTGGT
AGGACAAGAAGGAGATCAAGGAGGTGATGGAGATGCCAGACCTGCCCAGG
ATTCCGGTGGGAGCGTGGACAGCGCATGGATCCTTGCAGCGTGTGCTCGG
GAGTTCTTGTAGCTTTTCTTTACGTCAGAGCCGTGTATTCAGCCGCACTT
CGACCGTCTCAACAAGCTGGGCGTCGAACAGATGACGTACGCCAACCACG
AGGCCGTGCCCTTGCGAGAGGACGTGCGAGACTACTTCAGGGAAGTGAGC
ACGTTCAAGGTCAACCACCTCTTGTTGCCGCTAACCCACGAGGTGGGGGA
GAGAAGTCGCTTTTGGCGCCGTCGAAGCAGGCACGGGCAGTACATGCTGG
CTTACGACAACGGGAAGAGCGCGGTGAGGGTTTTCCCTGGGAGAGTCGTG
CCTCAGAGCGTGCACCGCTGGAGAAGGCTCAAGGCAGGAGAGAGAGAAGG
CGAGAGCACGCTTGACCCTGTGCTTGACCCTCCCCGACAGGCTTCCGGCG
GAGACGTGACGGTGACCGACGTGGTCTTGCCTTCAGTACAAGGCCATGGG
CAGGAGGAGGCGTGCAGCACAAGTACCAGTACAGGCAAGCAGAGTGTGTC
AGCAGTATGCGATGGGAGTGCCAGCAACAACAGCGAAACGTTTGGAGGCT
GGTTAACAAGCCCGGCCCAGAAGGAGGGTGGGGATGACTCTGACCATGAC
CAACTCGTCAACCGGGTGGCGATGGCGGACCCCCGGGAGTTGCGCTTCGA
CGAGGTTCTGGAGTGTAGCGACCCGTGCGTGCTTCACTACCCCAGCTGCG
GCTTGAGTTGGCTGCGGGACAAGTACCATCTGCTGGGGAGTTTCCCTTCC
TCGTGGTTCGACGGGAAGCTGCCGATCGCGCCGTGCTTCCATCTTGATGC
CCGCGACGCCATTCACGCAGGGGAAGGAGAGAAAGGAGCACCCGTCTCGC
CAGACGACGGGGATGGCATGAGCGAATGTCTTGGTGTTGGTTTTGGAGAT
GGCGGGGATGGGGGGAGGGCCCTCTACCGCAACGAGGTGATGCTGTGTCC
GGACGAGCACTCGGAGGAGATGCAAGCGCAGCTGGAGCACGGAGTGTTGC
GGGTGATCGACGGGCCGGCGAGGCTCATCCAGCAAGCTCTCGACGCCCGA
GCCTCCCCCGGGTCAAAGATAACGCCTGATATATTGTCGACGGCAGCGGA
AGGCGCACGGCTGGGTAGTCAGGCGGAAGGGTCGAGCGCGTCAGACCATG
TAGTGGGGAAAAAAGTGGCGGGCCGGAATCCCACGGACTCGTCGTCGATG
ACAATGACCGCGGCCTCACGTCTAGTAGGGGCAATGCTTCCGGGAACCGC
CGCAGCGCCGACGGCTCCTGTGGTAGGACAAGAAGGAGATCAAGGAGGTG
ATGGAGATGCCAGACCTGCCCAGGATTCCGGTGGGAGCGTGGACAGCGCA
TGGATCCTTGCAGCGTGTGCTCGGGAGTTCTTGTAG
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