mRNA_C-linearis_contig99.17162.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig99.17162.1

>prot_C-linearis_contig99.17162.1 ID=prot_C-linearis_contig99.17162.1|Name=mRNA_C-linearis_contig99.17162.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=428bp
MRCSTGAGRLTAFVMSTLVASPIAFRPVALTLRFASSSRDRLHLTRHHLH
PHHLLPACYRTSSGRSSTRSSATLQRSLPILGVDAGFGLASVSALGALRL
LGSTAVAPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYSRGVFYPGV
FQFSLELSRHRVPSWQEPLSVAVLTARAREFLFALEIGDTHEISKQFRLC
GDRNGLKGWGRGPVLYGSVKEWICPSRKSERKAKNFGFLLEDDGRGGRRR
PSGAEGGYIFIGDTGEGDPLAGEIMISKYPDRMKAVFLHVVSDAPRQGKV
SLPMDRVVSGVPVVYFRTYVGAAAKAVELGLMNKSGLDNVITAAKEAMVK
IPPKSSKWVDMNRDLLLARIAGKRQQLPSMGVEALTLTQHGGALAPKISH
ILKRSGPTTTTTRRRSSLVAAATKARP*
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mRNA from alignment at C-linearis_contig99:259211..262375+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig99.17162.1 ID=mRNA_C-linearis_contig99.17162.1|Name=mRNA_C-linearis_contig99.17162.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3165bp|location=Sequence derived from alignment at C-linearis_contig99:259211..262375+ (Chordaria linearis ClinC8C monoicous)
CCGACAGCTGCTGGCTGCTAGTAAGTGTGGGTGTTTCGACGCCATGCGCT GTTCGACAGGTGCCGGGCGGTTGACCGCTTTTGTTATGAGCACCCTCGTG GCATCTCCGATAGCGTTTCGGCCCGTAGCTCTCACTCTGCGCTTCGCCAG CAGCAGCAGAGACCGCCTGCACCTGACAAGGCATCACCTTCACCCGCACC ACCTTCTTCCGGCGTGCTACCGCACGAGCAGCGGTCGTAGTAGCACTAGA AGCTCCGCGACTTTGCAACGATCGTTACCAATACTCGGTGTTGATGCTGG GTTTGGGCTAGCAAGCGTCAGCGCTCTGGGCGCCCTGAGACTCTTGGGTT CAACTGCTGTCGCCCCGAAACGAGTTCGGGTCGTGACGGACATCGACGAC ACCGTCAAGTCCAGCGGGAATAAGCGTTTGTTCGGAGTACCGCTGGGTGG GATCGACGCTCAATGTGAGAAAAAAGGGAGGGGATTGCGGCTCGAGAAGA AAAAAACAACGGCTCCAAACACAAACGCCAGTGGTGCACTGCTGCTGTAT GCGGTATGTAGTGAACATTGATGATGCACAGCCGTTGACGAGTGTTATTA TACTCTCGTGTGTACTCTGTACGGTCCTGTCCGCATCCTTCCTTGGGCGG GTAATCAAGGGTGCCTTCGACGGTTGCCTTACCCTGGAAAACCTTATATC TTCCGTATATGCCACGTTGTCTCGCGTAGCGGGGCAGGCAGCCCATGATG TACATACTCTGACGCAAACAAGTCTAAAAACAGCGAATCGTCGGAGGGGG GTGAACGATCATGTAACGGAGCATGAAGGTGTTACAACGAAAGAGGCGGG TTCAAACAACCAGAGAGCAACTAGTCTTTATTGTACAACTTCGGCCGAAG TGCGGAGTGCATTCTGTCGAGTCGGAATACGAGTCAGCGTAATTCCAAAT AACCCCAGTTGAAATGTACAGCCGCTGTGCTGGTCTTCAACCATTGCATG CGCCTCCAAAGCAGCCCGGCTGTATGTGTTCGCGTCCAAGCCAGTGTATT GTTGGTTGGGGCAAACACCCATGGTGTGAGGCGCCGGGGCGTTGATCCAG GTAGTCACCTGCCCGCTCTACCAACAATGGACCGAAAAGTATGCTTCATG ATCACGAAAGCCTTAACATGGCAGCTTTCAGCTCCCCGCTGCTGTTGCCC ACGACATGCGACGGCTCCTGCACGCCCTGTATCAGTTGGCCTTCCAAGCG ACGTGCGCAGTTTTTTGCTTGTCTGATCTCATGAACACCAAACTGTCAGT TGACCGTGCGTAAGAAATAAATTGCAACTCTGAAAAGCGTACAAATTGGA CCTTGATGCACGCACATCTCCACCACATCTCCACCTCCCCGACCGCTTCA AACAAGCTGCGGATGACCAATCTGTAGAGAACTGCGAGCTGTTGTGGATC AAACACTCGAGGATAGACACAGGGCGTGAGACTGCCCGCCCTTTAGGGGC GAGCTGGTGGGACACTTAACGCATCCCCGACAGCTCGCACGGTACATACC ACAACCCGGTAGGGTGACGACAGACAGCAGTCCTACGCACGCGTGTGTCT CGCTCGAGCCTTGTGACGACGCGGTCCGTTCCTTTGCTGCTTGCAACCCC TCCGCCCACCCCGACCAGATAGCAGAGGTGTGTTTTACCCAGGGGTGTTC CAGTTTTCCCTGGAGCTGTCGCGGCATCGCGTGCCTTCGTGGCAAGAGCC GCTATCCGTGGCGGTGCTGACTGCGAGAGCAAGAGAGTTCCTGTTCGCGC TTGAGATCGGCGACACGCACGAGATCTCCAAGCAGTTCCGACTATGCGGG GATCGCAACGGGCTCAAGGGGTGGGGGCGGGGACCGGTGCTGTACGGAAG CGTCAAGGAGTGGATCTGTCCCAGCCGAAAGAGCGAGAGAAAAGCCAAGA ACTTTGGGTTCCTCCTGGAAGACGACGGGCGAGGAGGCCGACGTCGACCC AGCGGGGCCGAGGGTGGTTACATTTTCATCGGAGACACCGGCGAGGGCGA TCCGCTCGCCGGGGAGATCATGATCTCCAAGTACCCCGATAGGATGAAGG CGGTGTTTCTTCACGTGGTGAGTGATGCCCCCCGTCAGGGGAAGGTGAGC TTGCCGATGGATCGTGTGGTGAGCGGTGTGCCGGTGGTGTACTTTCGGAC ATACGTCGGGGCAGCAGCGAAAGCCGTGGAGCTGGGTTTGATGAACAAGT CGGGGCTGGATAACGTCATCACCGCTGCAAAGGAGGTGAAATATTGACAA CGAAGTTTTTTAGCTCTCTGACGTGTTCCTCTGTAAGCGTGCACTAAATA TACGATCGATTTCGTGCCGGAAATAGCGTGAAGAAAGCGACGGCGTGTTT TTTGGTTCGGCGATGAAGCGGTCGCATCGCATGCAGTTGCAGTCGAGGGC CCAATGCAGATGCAGCATCGTTCGAAATCCAACACAAGTATGTGCACTGC TTGCGTGACCAATGGTCGCGTCCGAACCTCGTCACAGCAATTGACTCGTT TAACTTTTAACGTTTTTTGTCCTGCGTGTTGCGGCGTGTGTCTAGGCGAT GGTGAAGATTCCGCCAAAGTCGTCCAAGTGGGTGGACATGAACAGGGATC TCCTCTTGGCGCGGATTGCAGGAAAGCGTCAACAGCTGCCCTCCATGGGC GTAGAAGCTCTCACCTTGACACAACATGGCGGCGCTTTGGCGCCAAAGAT CAGTCATATTTTGAAGCGTAGCGGCCCCACTACTACAACAACTAGACGGC GATCCTCTCTTGTCGCCGCAGCGACCAAGGCTCGTCCATGACGGAATGGG GATGGGAAGACAAGGCTTGGATTTGTACATCCCGCTGCAGTTCAGCTGCG TTAGAAAAATAGCTTTGTCGATACGTCGGTGGAGGCAAGCCGCACGCATG AGAAATAGGCGAATAATCAGCTCTTGTGATATTTCTCCGGTTGAGCATGA GAAATTTGCGAGCGTAGCCTGTTGCGCGCATGTGCATTGTGGATGGGTTC ACTGGCCTGCTGCTGGTGTTGACAACGCCAGGTGTTTAGACACTAATTGT ACTAATCGAGGTTTTGTTCCCACGGTCGCCTCAACCTCGCTGGCTGGAAA GTAATCCCTTCGAAG
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Coding sequence (CDS) from alignment at C-linearis_contig99:259211..262375+

>mRNA_C-linearis_contig99.17162.1 ID=mRNA_C-linearis_contig99.17162.1|Name=mRNA_C-linearis_contig99.17162.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at C-linearis_contig99:259211..262375+ (Chordaria linearis ClinC8C monoicous)
ATGCGCTGTTCGACAGGTGCCGGGCGGTTGACCGCTTTTGTTATGAGCAC
CCTCGTGGCATCTCCGATAGCGTTTCGGCCCGTAGCTCTCACTCTGCGCT
TCGCCAGCAGCAGCAGAGACCGCCTGCACCTGACAAGGCATCACCTTCAC
CCGCACCACCTTCTTCCGGCGTGCTACCGCACGAGCAGCGGTCGTAGTAG
CACTAGAAGCTCCGCGACTTTGCAACGATCGTTACCAATACTCGGTGTTG
ATGCTGGGTTTGGGCTAGCAAGCGTCAGCGCTCTGGGCGCCCTGAGACTC
TTGGGTTCAACTGCTGTCGCCCCGAAACGAGTTCGGGTCGTGACGGACAT
CGACGACACCGTCAAGTCCAGCGGGAATAAGCGTTTGTTCGGAGTACCGC
TGGGTGGGATCGACGCTCAATATGCGCTGTTCGACAGGTGCCGGGCGGTT
GACCGCTTTTGTTATGAGCACCCTCGTGGCATCTCCGATAGCGTTTCGGC
CCGTAGCTCTCACTCTGCGCTTCGCCAGCAGCAGCAGAGACCGCCTGCAC
CTGACAAGGCATCACCTTCACCCGCACCACCTTCTTCCGGCGTGCTACCG
CACGAGCAGCGGTCGTAGTAGCACTAGAAGCTCCGCGACTTTGCAACGAT
CGTTACCAATACTCGGTGTTGATGCTGGGTTTGGGCTAGCAAGCGTCAGC
GCTCTGGGCGCCCTGAGACTCTTGGGTTCAACTGCTGTCGCCCCGAAACG
AGTTCGGGTCGTGACGGACATCGACGACACCGTCAAGTCCAGCGGGAATA
AGCGTTTGTTCGGAGTACCGCTGGGTGGGATCGACGCTCAATATAGCAGA
GGTGTGTTTTACCCAGGGGTGTTCCAGTTTTCCCTGGAGCTGTCGCGGCA
TCGCGTGCCTTCGTGGCAAGAGCCGCTATCCGTGGCGGTGCTGACTGCGA
GAGCAAGAGAGTTCCTGTTCGCGCTTGAGATCGGCGACACGCACGAGATC
TCCAAGCAGTTCCGACTATGCGGGGATCGCAACGGGCTCAAGGGGTGGGG
GCGGGGACCGGTGCTGTACGGAAGCGTCAAGGAGTGGATCTGTCCCAGCC
GAAAGAGCGAGAGAAAAGCCAAGAACTTTGGGTTCCTCCTGGAAGACGAC
GGGCGAGGAGGCCGACGTCGACCCAGCGGGGCCGAGGGTGGTTACATTTT
CATCGGAGACACCGGCGAGGGCGATCCGCTCGCCGGGGAGATCATGATCT
CCAAGTACCCCGATAGGATGAAGGCGGTGTTTCTTCACGTGGTGAGTGAT
GCCCCCCGTCAGGGGAAGGTGAGCTTGCCGATGGATCGTGTGGTGAGCGG
TGTGCCGGTGGTGTACTTTCGGACATACGTCGGGGCAGCAGCGAAAGCCG
TGGAGCTGGGTTTGATGAACAAGTCGGGGCTGGATAACGTCATCACCGCT
GCAAAGGAGATAGCAGAGGTGTGTTTTACCCAGGGGTGTTCCAGTTTTCC
CTGGAGCTGTCGCGGCATCGCGTGCCTTCGTGGCAAGAGCCGCTATCCGT
GGCGGTGCTGACTGCGAGAGCAAGAGAGTTCCTGTTCGCGCTTGAGATCG
GCGACACGCACGAGATCTCCAAGCAGTTCCGACTATGCGGGGATCGCAAC
GGGCTCAAGGGGTGGGGGCGGGGACCGGTGCTGTACGGAAGCGTCAAGGA
GTGGATCTGTCCCAGCCGAAAGAGCGAGAGAAAAGCCAAGAACTTTGGGT
TCCTCCTGGAAGACGACGGGCGAGGAGGCCGACGTCGACCCAGCGGGGCC
GAGGGTGGTTACATTTTCATCGGAGACACCGGCGAGGGCGATCCGCTCGC
CGGGGAGATCATGATCTCCAAGTACCCCGATAGGATGAAGGCGGTGTTTC
TTCACGTGGTGAGTGATGCCCCCCGTCAGGGGAAGGTGAGCTTGCCGATG
GATCGTGTGGTGAGCGGTGTGCCGGTGGTGTACTTTCGGACATACGTCGG
GGCAGCAGCGAAAGCCGTGGAGCTGGGTTTGATGAACAAGTCGGGGCTGG
ATAACGTCATCACCGCTGCAAAGGAGGCGATGGTGAAGATTCCGCCAAAG
TCGTCCAAGTGGGTGGACATGAACAGGGATCTCCTCTTGGCGCGGATTGC
AGGAAAGCGTCAACAGCTGCCCTCCATGGGCGTAGAAGCTCTCACCTTGA
CACAACATGGCGGCGCTTTGGCGCCAAAGATCAGTCATATTTTGAAGCGT
AGCGGCCCCACTACTACAACAACTAGACGGCGATCCTCTCTTGTCGCCGC
AGCGACCAAGGCTCGTCCATGAGCGATGGTGAAGATTCCGCCAAAGTCGT
CCAAGTGGGTGGACATGAACAGGGATCTCCTCTTGGCGCGGATTGCAGGA
AAGCGTCAACAGCTGCCCTCCATGGGCGTAGAAGCTCTCACCTTGACACA
ACATGGCGGCGCTTTGGCGCCAAAGATCAGTCATATTTTGAAGCGTAGCG
GCCCCACTACTACAACAACTAGACGGCGATCCTCTCTTGTCGCCGCAGCG
ACCAAGGCTCGTCCATGA
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