Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 1 |
| Model size | 453 |
| Cds size | 366 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930846.0774171-UTR-C-linearis_contig99:237077..237101 | 1622930846.0774171-UTR-C-linearis_contig99:237077..237101 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 237078..237101 + |
| 1690881279.6663334-UTR-C-linearis_contig99:237077..237101 | 1690881279.6663334-UTR-C-linearis_contig99:237077..237101 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 237078..237101 + |
| 1622930846.1310835-UTR-C-linearis_contig99:237467..237530 | 1622930846.1310835-UTR-C-linearis_contig99:237467..237530 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 237468..237530 + |
| 1690881279.697829-UTR-C-linearis_contig99:237467..237530 | 1690881279.697829-UTR-C-linearis_contig99:237467..237530 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 237468..237530 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930846.0991678-CDS-C-linearis_contig99:237101..237467 | 1622930846.0991678-CDS-C-linearis_contig99:237101..237467 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 237102..237467 + |
| 1690881279.6804047-CDS-C-linearis_contig99:237101..237467 | 1690881279.6804047-CDS-C-linearis_contig99:237101..237467 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 237102..237467 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17157.1 >prot_C-linearis_contig99.17157.1 ID=prot_C-linearis_contig99.17157.1|Name=mRNA_C-linearis_contig99.17157.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=122bp
MPSASRLMPVPWKWQVLNSDKQPPVAKKLKYKSQRLPCLEVFHTPFASIL
CACVCVPISVVCHYKQAELLAMKEMPTCRVVTLLAKQNLRTCSYCRFVGF
VLAVTGEGSSRNRSGPHHTAL* back to topmRNA from alignment at C-linearis_contig99:237078..237530+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig99.17157.1 ID=mRNA_C-linearis_contig99.17157.1|Name=mRNA_C-linearis_contig99.17157.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=453bp|location=Sequence derived from alignment at C-linearis_contig99:237078..237530+ (Chordaria linearis ClinC8C monoicous)
GGCAGTCAGTCAAATCATCAAATCATGCCGAGTGCCTCACGCCTCATGCC
AGTGCCGTGGAAGTGGCAAGTGTTGAACAGTGACAAACAACCTCCTGTCG
CGAAAAAATTGAAATACAAAAGCCAGCGTTTGCCTTGCCTTGAGGTTTTT
CATACTCCTTTTGCAAGTATCCTCTGTGCATGTGTATGTGTACCGATTTC
GGTAGTTTGTCACTACAAGCAAGCGGAATTGCTAGCCATGAAGGAAATGC
CCACGTGTCGTGTAGTCACCCTGCTCGCGAAGCAAAATCTACGGACATGT
TCGTACTGTAGATTCGTTGGTTTTGTTTTGGCGGTGACGGGGGAAGGGAG
TTCGAGGAACCGAAGCGGTCCTCATCATACAGCCCTTTAATGTATCTTCG
ACTGACCCTGCCGGCGGTAATTGGTGAAAATGCGATCTCGTTGCCATCTG
TCC back to topCoding sequence (CDS) from alignment at C-linearis_contig99:237078..237530+ >mRNA_C-linearis_contig99.17157.1 ID=mRNA_C-linearis_contig99.17157.1|Name=mRNA_C-linearis_contig99.17157.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at C-linearis_contig99:237078..237530+ (Chordaria linearis ClinC8C monoicous)
ATGCCGAGTGCCTCACGCCTCATGCCAGTGCCGTGGAAGTGGCAAGTGTT
GAACAGTGACAAACAACCTCCTGTCGCGAAAAAATTGAAATACAAAAGCC
AGCGTTTGCCTTGCCTTGAGGTTTTTCATACTCCTTTTGCAAGTATCCTC
TGTGCATGTGTATGTGTACCGATTTCGGTAGTTTGTCACTACAAGCAAGC
GGAATTGCTAGCCATGAAGGAAATGCCCACGTGTCGTGTAGTCACCCTGC
TCGCGAAGCAAAATCTACGGACATGTTCGTACTGTAGATTCGTTGGTTTT
GTTTTGGCGGTGACGGGGGAAGGGAGTTCGAGGAACCGAAGCGGTCCTCA
TCATACAGCCCTTTAAATGCCGAGTGCCTCACGCCTCATGCCAGTGCCGT
GGAAGTGGCAAGTGTTGAACAGTGACAAACAACCTCCTGTCGCGAAAAAA
TTGAAATACAAAAGCCAGCGTTTGCCTTGCCTTGAGGTTTTTCATACTCC
TTTTGCAAGTATCCTCTGTGCATGTGTATGTGTACCGATTTCGGTAGTTT
GTCACTACAAGCAAGCGGAATTGCTAGCCATGAAGGAAATGCCCACGTGT
CGTGTAGTCACCCTGCTCGCGAAGCAAAATCTACGGACATGTTCGTACTG
TAGATTCGTTGGTTTTGTTTTGGCGGTGACGGGGGAAGGGAGTTCGAGGA
ACCGAAGCGGTCCTCATCATACAGCCCTTTAA back to top
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