Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 1 |
| Model size | 616 |
| Cds size | 318 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930845.980412-UTR-C-linearis_contig99:135935..136229 | 1622930845.980412-UTR-C-linearis_contig99:135935..136229 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 135936..136229 + |
| 1690881279.6208708-UTR-C-linearis_contig99:135935..136229 | 1690881279.6208708-UTR-C-linearis_contig99:135935..136229 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 135936..136229 + |
| 1622930846.0083709-UTR-C-linearis_contig99:136547..136551 | 1622930846.0083709-UTR-C-linearis_contig99:136547..136551 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 136548..136551 + |
| 1690881279.6498592-UTR-C-linearis_contig99:136547..136551 | 1690881279.6498592-UTR-C-linearis_contig99:136547..136551 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig99 136548..136551 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930845.9961874-CDS-C-linearis_contig99:136229..136547 | 1622930845.9961874-CDS-C-linearis_contig99:136229..136547 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 136230..136547 + |
| 1690881279.6330256-CDS-C-linearis_contig99:136229..136547 | 1690881279.6330256-CDS-C-linearis_contig99:136229..136547 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 136230..136547 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17149.1 >prot_C-linearis_contig99.17149.1 ID=prot_C-linearis_contig99.17149.1|Name=mRNA_C-linearis_contig99.17149.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=106bp
MLRLAQLRHNRAVVYKYFCGTQSLHTRLLRLAQSSHAHAVASRTAVSTLL
YALLFVLLVVGTPVYRVGSCYRAACLALVVSRPTTPWRSGCPLLRRAVAT
YCWLC* back to topmRNA from alignment at C-linearis_contig99:135936..136551+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig99.17149.1 ID=mRNA_C-linearis_contig99.17149.1|Name=mRNA_C-linearis_contig99.17149.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=616bp|location=Sequence derived from alignment at C-linearis_contig99:135936..136551+ (Chordaria linearis ClinC8C monoicous)
TCTAATCGTCAGTGGACGTGTGCTCTCTTCCTCTACCATATGCATGTCAC
CTGGGGTGTTAACCGCTAGGCATGTCGTGCGTGGTCTGAGTTTTTCGGCG
TACAGGCTGCTAGTAGACGCCGTTGTGCTCCGGCCGCCAGCCGTATGTAC
GAGGTGCTTGTCACGCTGCTGATAGCCAAACGCAGTTAGTTGTGGGTAGA
CGCCCTGGTGGTTGTAGTGACTTCCTGTCGCCTGATTTCGCTGTGCGTAC
TGAACGCAACTCCAGGCTGCTGCGACTAGCGCCGTCTTCGCACGATGTTG
CGGCTGGCACAGCTCCGACACAACCGCGCTGTTGTATACAAGTACTTCTG
CGGCACGCAGTCATTACATACCAGGTTGCTGCGGCTAGCGCAGTCTTCAC
ACGCACACGCTGTTGCGTCTCGCACAGCAGTGTCAACGCTGTTGTACGCG
CTGTTGTTTGTCTTGCTCGTTGTCGGCACTCCTGTGTACCGCGTGGGCAG
TTGCTACAGGGCGGCTTGCCTTGCCCTCGTTGTCAGCCGGCCGACCACGC
CGTGGAGGTCGGGTTGCCCGCTCTTGCGCCGGGCGGTTGCTACATATTGT
TGGTTGTGTTGATGGC back to topCoding sequence (CDS) from alignment at C-linearis_contig99:135936..136551+ >mRNA_C-linearis_contig99.17149.1 ID=mRNA_C-linearis_contig99.17149.1|Name=mRNA_C-linearis_contig99.17149.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at C-linearis_contig99:135936..136551+ (Chordaria linearis ClinC8C monoicous)
ATGTTGCGGCTGGCACAGCTCCGACACAACCGCGCTGTTGTATACAAGTA
CTTCTGCGGCACGCAGTCATTACATACCAGGTTGCTGCGGCTAGCGCAGT
CTTCACACGCACACGCTGTTGCGTCTCGCACAGCAGTGTCAACGCTGTTG
TACGCGCTGTTGTTTGTCTTGCTCGTTGTCGGCACTCCTGTGTACCGCGT
GGGCAGTTGCTACAGGGCGGCTTGCCTTGCCCTCGTTGTCAGCCGGCCGA
CCACGCCGTGGAGGTCGGGTTGCCCGCTCTTGCGCCGGGCGGTTGCTACA
TATTGTTGGTTGTGTTGAATGTTGCGGCTGGCACAGCTCCGACACAACCG
CGCTGTTGTATACAAGTACTTCTGCGGCACGCAGTCATTACATACCAGGT
TGCTGCGGCTAGCGCAGTCTTCACACGCACACGCTGTTGCGTCTCGCACA
GCAGTGTCAACGCTGTTGTACGCGCTGTTGTTTGTCTTGCTCGTTGTCGG
CACTCCTGTGTACCGCGTGGGCAGTTGCTACAGGGCGGCTTGCCTTGCCC
TCGTTGTCAGCCGGCCGACCACGCCGTGGAGGTCGGGTTGCCCGCTCTTG
CGCCGGGCGGTTGCTACATATTGTTGGTTGTGTTGA back to top
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