Homology
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI)
HSP 1 Score: 241 bits (615), Expect = 5.630e-72
Identity = 133/151 (88.08%), Postives = 136/151 (90.07%), Query Frame = 2
Query: 353 ATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMYS 805
A KTTKELS+EEIEDYKEAFSNFDKDGNGNIDE ELGVVMRSLGYSPTNQQLKEMMAKVDTD SGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTP+ELAEIMRGLGDKLSDDE XXXXXX +EFISFMYS
Sbjct: 4 AAKTTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPAELAEIMRGLGDKLSDDEIELLVKVAXXXXXXVISIDEFISFMYS 154
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE)
HSP 1 Score: 214 bits (544), Expect = 6.230e-61
Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 2
Query: 353 ATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDE 724
A TTKELS+EEIEDYKEAFSNFDKD +GNIDE ELGVVMRSLGYSPTN+QLKE+MAKVDTDG+GGISF+EFVAMMQLGEVETDF KEINEAFKFFDKDGDGEVT +ELAEIMRGLGD L+DDE
Sbjct: 67 AATTTKELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFKFFDKDGDGEVTRAELAEIMRGLGDTLTDDE 190
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA)
HSP 1 Score: 157 bits (396), Expect = 6.730e-41
Identity = 78/119 (65.55%), Postives = 94/119 (78.99%), Query Frame = 2
Query: 368 KELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDE 724
+E ++EE+EDY+EAF+NFDKD +G IDE ELG VMRSLGY+PT++QL +MM KVD DG+G ISFDEFV MM+ EVETDF +EI EAFK FDKDG G + EL IM+GLG LSD E
Sbjct: 10 REATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKVFDKDGSGSIDKEELTAIMKGLGANLSDQE 128
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
D7G0X3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0X3_ECTSI)
HSP 1 Score: 153 bits (386), Expect = 2.100e-39
Identity = 77/143 (53.85%), Postives = 100/143 (69.93%), Query Frame = 2
Query: 374 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMY 802
LS+E++ D KEAF NFD++G+G ID EL V+RSLGYSPT QLK++M KVD DG+G ISF+EFV +M++G +ETD+ KEIN AF FFDK+GDG+V ELAEI R LGD L+D E +EF++FM+
Sbjct: 15 LSEEDVADLKEAFDNFDRNGDGTIDSVELATVLRSLGYSPTKDQLKKLMDKVDLDGTGDISFEEFVVLMRVGGMETDYEKEINGAFSFFDKNGDGQVDRQELAEIARALGDSLTDAEIYLLINAAHKDRDATISMKEFVTFMF 157
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI)
HSP 1 Score: 147 bits (371), Expect = 1.800e-37
Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 368 KELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMYS 805
K+L+ EE+ED KE F FDKDG+G ID EL VM SLGYSPTN+QL++MMAKVD DG+G I+F EFV MM+ +V+TDF ++I EAFKFFD+DG G + EL IMR LG KL+D E EF+ MYS
Sbjct: 10 KDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINEFLKIMYS 155
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA)
HSP 1 Score: 146 bits (368), Expect = 4.080e-37
Identity = 75/144 (52.08%), Postives = 95/144 (65.97%), Query Frame = 2
Query: 374 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMYS 805
L+ EE+EDY+EAF NFDKDGNG ID ELG+VMRSLGYSPT++QL++M+ + +F+EFV MM+ E+ TDF EI AF+FFDKDGDG++T ELA +MRGLG LSD E EF +F+YS
Sbjct: 8 LTKEEVEDYEEAFKNFDKDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFEFFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHEFTTFLYS 151
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A835YVZ2_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ2_9STRA)
HSP 1 Score: 131 bits (329), Expect = 1.420e-31
Identity = 75/154 (48.70%), Postives = 92/154 (59.74%), Query Frame = 2
Query: 359 KTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFK------------------------------------FFDKDGDGEVTPSELAEIMRGLGDKL 712
K K LS EE+EDY+EAF NFDK GNG ID ELG+VMRSLGYSPT++QL++M+ +VD DG+G I+F+EFV MM+ E+ TDF EI AF+ FFDKDG G++ P ELA IMRGLG L
Sbjct: 3 KEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANL 156
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A7SRU7_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SRU7_NEMVE)
HSP 1 Score: 128 bits (321), Expect = 1.040e-30
Identity = 71/148 (47.97%), Postives = 100/148 (67.57%), Query Frame = 2
Query: 371 ELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMYS*AG 814
+L++EEI +YKEAFS FDKDG+G + ELG VMR+LG +PT+++++EM+ +VD DGSG I F+EF+ +M + E+ AF+ FDKDG+G +T +EL E++ LG+KLS+DE XXXXXX EEFI M + G
Sbjct: 4 DLTEEEIAEYKEAFSLFDKDGDGTVTTAELGTVMRNLGQNPTDEEIREMIKEVDEDGSGSIGFEEFLQLMSKKTKGKSYEDELMAAFQIFDKDGNGSITVTELKEVLDSLGEKLSEDEVGEMIKEAXXXXXXTVNIEEFIKMMVAITG 151
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A7S3PSQ8_9STRA (Calmodulin n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3PSQ8_9STRA)
HSP 1 Score: 127 bits (320), Expect = 1.250e-30
Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 2
Query: 371 ELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFMYS 805
+L++E+I ++KEAFS FDKDG+G I ELG VMRSLG +PT +L +M+ +VD DG+G I F EF+ MM +TD +EI EAFK FDKDG+G ++ +EL +M LG+KL+DDE EEF+ M S
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELNDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHVMTNLGEKLTDDECDEMIREADIDGDGQINYEEFVKMMLS 148
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match:
A0A6J0JA04_9PASS (calmodulin, striated muscle n=8 Tax=Neognathae TaxID=8825 RepID=A0A6J0JA04_9PASS)
HSP 1 Score: 127 bits (319), Expect = 1.710e-30
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 2
Query: 374 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXXEEFISFM 799
LS+E+I ++KEAFS FD+DG+G+I ELG VMRSLG +PT +L++M+ +VDTDGSG + F EF+++M +TD +EI EAF+ FDKDG+G ++ +EL +M LG+KL+D+E EEF+ M
Sbjct: 5 LSEEKIAEFKEAFSLFDRDGDGSITTRELGTVMRSLGQNPTEAELRDMVGEVDTDGSGTVDFPEFLSLMARRMRDTDGEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADCNNDGQVNYEEFVRMM 146
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 5.63e-72 / Id = 88.08 Expect = 6.23e-61 / Id = 87.90 Expect = 6.73e-41 / Id = 65.55 Expect = 2.10e-39 / Id = 53.85 Expect = 1.80e-37 / Id = 53.42 Expect = 4.08e-37 / Id = 52.08 Expect = 1.42e-31 / Id = 48.70 Expect = 1.04e-30 / Id = 47.97 Expect = 1.25e-30 / Id = 46.90 Expect = 1.71e-30 / Id = 45.77 Sequence D8LJU6_ECTSI A0A6H5JMF0_9PHAE A0A835YUT0_9STRA D7G0X3_ECTSI D8LH46_ECTSI A0A835YVF8_9STRA A0A835YVZ2_9STRA A7SRU7_NEMVE A0A7S3PSQ8_9STRA A0A6J0JA04_9PASS Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 245.0 Seed ortholog evalue 2.3e-62 Seed eggNOG ortholog 2880.D8LJU6 KEGG ko ko:K02183 KEGG Pathway ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418 Hectar predicted targeting category other localisation EggNOG free text desc. Ca2 -binding protein (EF-Hand superfamily EggNOG OGs COG5126@1,KOG0027@2759 Ec32 ortholog description Similar to calmodulin Ec32 ortholog Ec-23_000190.1 COG Functional cat. DTZ Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01009,ko03036,ko04131,ko04147 Exons 5 Model size 2348 Cds size 459 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930843.406616-UTR-C-linearis_contig98:491323..492863 1622930843.406616-UTR-C-linearis_contig98:491323..492863 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 491324..492863 - 1690881278.2680025-UTR-C-linearis_contig98:491323..492863 1690881278.2680025-UTR-C-linearis_contig98:491323..492863 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 491324..492863 - 1622930843.481935-UTR-C-linearis_contig98:495206..495210 1622930843.481935-UTR-C-linearis_contig98:495206..495210 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 495207..495210 - 1690881278.3223388-UTR-C-linearis_contig98:495206..495210 1690881278.3223388-UTR-C-linearis_contig98:495206..495210 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 495207..495210 - 1622930843.4941423-UTR-C-linearis_contig98:498047..498392 1622930843.4941423-UTR-C-linearis_contig98:498047..498392 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 498048..498392 - 1690881278.333271-UTR-C-linearis_contig98:498047..498392 1690881278.333271-UTR-C-linearis_contig98:498047..498392 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig98 498048..498392 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930843.4196897-CDS-C-linearis_contig98:492863..492888 1622930843.4196897-CDS-C-linearis_contig98:492863..492888 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 492864..492888 - 1690881278.279688-CDS-C-linearis_contig98:492863..492888 1690881278.279688-CDS-C-linearis_contig98:492863..492888 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 492864..492888 - 1622930843.4351985-CDS-C-linearis_contig98:493291..493413 1622930843.4351985-CDS-C-linearis_contig98:493291..493413 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 493292..493413 - 1690881278.2891214-CDS-C-linearis_contig98:493291..493413 1690881278.2891214-CDS-C-linearis_contig98:493291..493413 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 493292..493413 - 1622930843.4503691-CDS-C-linearis_contig98:493836..493971 1622930843.4503691-CDS-C-linearis_contig98:493836..493971 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 493837..493971 - 1690881278.3002527-CDS-C-linearis_contig98:493836..493971 1690881278.3002527-CDS-C-linearis_contig98:493836..493971 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 493837..493971 - 1622930843.4669275-CDS-C-linearis_contig98:495029..495206 1622930843.4669275-CDS-C-linearis_contig98:495029..495206 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 495030..495206 - 1690881278.3133585-CDS-C-linearis_contig98:495029..495206 1690881278.3133585-CDS-C-linearis_contig98:495029..495206 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig98 495030..495206 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig98.17137.1
>prot_C-linearis_contig98.17137.1 ID=prot_C-linearis_contig98.17137.1|Name=mRNA_C-linearis_contig98.17137.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=153bp
MATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTN back to top mRNA from alignment at C-linearis_contig98:491324..498392-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig98.17137.1 ID=mRNA_C-linearis_contig98.17137.1|Name=mRNA_C-linearis_contig98.17137.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7069bp|location=Sequence derived from alignment at C-linearis_contig98:491324..498392- (Chordaria linearis ClinC8C monoicous)ACACCGGACCACCTGGAACGCCTTCGCTTTATCGACGGGGGATCGTCTTC
AAGAATTTCGTAAGCCCGTTGTGTCCACCCGTGACGCTTGCTCTTGCTCT
GTTTTGTACGTGCGGATGCGCGACTCAACCCCGCGTGGCTCTCCTTTCTC
AGTTATTTGGATCGGCCGACCTTTGAGGGCGTTCCCTTTCCTCCTCCCCT
TCTAACCTTGCCTTCATGGTAGTGAAGGAGTCGCCCTGGTTCTAGACGGT
TGGTTGTTCGGCGTGCTGGAGGAGAGAAGAAATACCCCCCCTCGCAATTC
CACGAGCTTGGTTGTTACCTTCGCTCATCCCGAACTACATACCAG GTACG
ATGTAAATTATCTACGCCCTAGAAATTATCTGGAAATGGGAAACGGGAAA
CGGCCTTTCCCAACCTTTCCCCGAAGCGAGTAGCGAAAAGGCGTATCCTG
TGCCATCGTGTCATCTCTTGTCTTGAAAACGACCCGGCCTCGCCGCGTAC
CACGCTAGAAGGGGTTCTCTTCTTATCTCTCTGGTGCCTGCGTTGGCGCG
AGCGAGCTCGGCTGGTTTGGTGCACATCGTCGCGGTGTTTTGGGAATAGC
GGGAAAATACACGAAGAAAAAAAGTAATACAGAGAGGCTGCTGCTGTGTC
GCGTCACGCGCTTCCGAAAACACGTTCTTGTCTCTCTTCTTGTCGCTCTC
ATTCCCCCCCATACTCTGTAACGTCTACCGCATAGAGATTAGAGAAGGCA
GGGTGAGTTTCCCCCGCTCGCGTGTGCGTGTCCCCTTTGGATCGATACGT
TGAGGCACTTGGCACGTTTGGGCACCCGTGTCGTTCGGTGGAAGACGCTC
GGCAGGGGGAAAAAGGCGACAACAAACGGAGAGACACACACCAGTTAGTT
CTGAGTTTGCAGAGCACGCTTCAGAGAGTTTTCGCAGGGTGCAGATTGCA
CGTGTGTTTTTTCTTTTTTCGCCGCCTCGTGCAACAGGCGCGCGGGAGAT
TGCACTACTGCTGCCTGCTGTAAATCCTAATCCTTCAAGTAAATAAGTAA
ATAGGCGTTGATGCCTCTATGTTGATGGTCACCCGCCTGCTCTGTCCGAC
CGTTGCGTTGATGCTTGATGTTGATGGTCACCCACCTGCTCTGTGTGACC
GTTTGTTTTCCCTCAGATTGCACCGATGGTATCTTGTAGCATCTCATCTA
CAAGATCGTATTGTATCGACCGATGTCTCTCGCCCCTGCCCCGCTATCAA
GAGAGCGGGGTAGTAGACATGTGGCGACGACACGTGAAAGATTAGCGAAA
TACTGCTGCTGTAGCACACCATTGTCGTGGTTTGCTGTGAGTAATTCGAG
TTCAGGTGCTTGTACATGGTTGGTACACTCGGCGTGAAGGCACTCCGCCT
TTCGGGTGCCCAAGCAAAGAGGGGAAAAGGCCCATTGCAGCCCGAAAGAA
GAAAGAAGCAAAAAAAAAGAAGAAAAATCGGTCCCATCTCCCATCTCCCA
TCTCCGATTTGGGGCTGTTGTTCTGGGTTCTGTGATTCGTTTCCAAAAGT
TTTTCCCTGTCTCTGCATGGTCCACTTGCACGACCCACCACGCGCACGCA
CTGCACCACGTGCCTGGTGCGTTAACTCTGTCATGTGTGTGTGTGTGTGC
TTTCGTCTCATACAGTATATACAGTATACGTAACTCTTGTCATATCCGTG
TGTGTGTGTGTGTGTGTGTGTTTGTTTTTGTTTTGGCGAGGCATACGATA
GACGAGCGTGCTTTTCCCCTTTCGTTAAGGAGCCCGATTTTCGAGCTCCC
CAAAGTATGGCCGGTCGCCCCGGTGGTGCTGTAGTGGTTTAAGCTCGAAC
CCACTATCATAGCAGCAAAGTCTGGAGTTCAATTCCAAGCAAAGTTGCTT
ATTTAATATTTTGCGACTTTGCAGGTGAAAGCGATAACATGGCTGAAAAA
GCTCGTGAGTACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGATG
GCTGCACCTTTCTCGCGATAAAATCCAAGGCAAGCACCGCAGGAGGAAGG
TGGCGCAAAAAAGAAACAGAAAAAGAAGAAAAAAGCCCCAGTGTTTACCC
CCTCCTGTGTGACCCGGGTTGGTTCTAGTTGTACAGAAAAATACACTGAA
CAAGTGTAGTACTCTAAATACACCGCAACGTGTAGTACACGTCTCGCCTT
GATCGGAGAGGGACTGTCGCCAAAATAAATGGGACGTAAACACACACACA
CACACAGACACATGCCTATCATATAGTCCGAAATTCTTCCAGGCATGAAA
ATTTGCGGATGAACTAAATAAAGCAAGAGACAAGAGACAGCAAAAAAACA
GCCGTAGTCTACTTGCAGGTGAGCTGCCTTCGCAAATTACTGCTGGGGGG
CTCCGTAACCCTAATCCTAACCCTAATCCTAACCCCAACCACCGACCCCC
CCCCCCAGTTAGCCGATTCCATGCTTCATCCCATGTGTTTTCTTACTACA
TACAAGCCTGCGTAGACTACCGTTGCAGGTAGAAGTACCAACTCCTGTGC
TGGCCCCGTTGTTGCGCTGCCGTTGTGGCCAGCCAGCAGCCCGCACGCAC
CGACCTAACCACAGACAGCAGCACTAGGCCAGGAATCAGTATCATGTAGA
TGCTCGTCGTGTGTGTCGTACCCTGTAGCTACCCGCAGCCCGCAGAAGCT
TTAAACTTCATTGAAATGTAACCCCCGAAACGCTTATACCTCCGATACGT
TGCTGTTTTAACGCGTAGTTTAGTTAATTCAGTATGGTAATGTCCCCCCT
CCTGTGTGACCCCGGTTGGTTCTAGTTGTACAGAAAAATGCACTGAACAA
GTGTAGTACTCTAAATACACCGCAACGTGTAGTACACGTCTCGCCTTAAT
CGGAAAGGGACTGTCGCCAAAATGAATGGGACGAAAACACACACACACAC
ACACACACACACACACACACACACAGCAGTACATATGGCTGTATTCTGAT
GTTTCGAAATTCGGCGGGTCTCGTATTTTCTCTCATCTATCCCTCGACTC
GTCTGTGGCCCCTTTCTGACTCCCATCCTTGCAACAGCAGTAGTAGCAGC
AGCGGCTTAAGCTTAGTTGGAAGCGGTGCAAGCCAGAAATACACATTCAA
CCCCCCGTCCGGTAACACCGCCCCCCCCACAGCACC ATGGCGACAAAAAC
GACCAAGGAATTGAGCGACGAGGAGATCGAGGACTACAAGGAGGCGTTTT
CTAACTTCGACAAGGACGGGAACGGGAACATCGATGAGGGGGAGCTCGGC
GTGGTGATGCGGTCTTTGGGGTACTCGCCCACTAACCAACAGCTCAAGGA
GATGATGGCGAAG GTGCGTGTTTGGGAGTGTAGATACATGAAGCTTTTTT
GTGTTTGTCCCGAAACGTGAAACGTTACATACACAAAAGGTATACTTAGC
ATCGTGTCAGCTTTACTTTGTGCTTTGGTGGTTTACACTATAGACAGCAG
TAGCGCATCTTTGGGATACTGGCTGTACGGCGTATTTTATTGTTTCCCGA
AGTTGCCCCGCAGTATCTCGTACATAGTAGCGGCATACAGACCTATTTAG
TCCCTTGACCCCTCGAGCGGCTCGATGACACTACATAGTTCAGGAGGAAA
ATCGAGAATCCGCTTTATTTTCGTAGTGTACATATCCGAGGCAACCTAAT
GTGGAGAAGAGCCTGCATGGCCCGGCATGGCCAACCTGTGCTCTTATCCT
CCGCAGCACTTACGCTGACAAGTCAAGTCGTCAAGTCGAGTTCTCGCCGA
TGAGATGCTGCCGCTGCCGCTGCCACTGCCACGTGCGTTGCGTTATTCTC
GTTCGACACACTACATACGAAGCATAATAACAAGTTTGAGTTTGTGTTTT
TCTCTTTTTCTTTTGCTTGGCATCGATCGACGTCGACCGCGCTACTTTAT
CCCTGTCTTGTGAGCGATGGCACGATGAGACTTTGAGTGTGGCATCGCAT
CAGTCTCGACGGACGTGGCATGTTTAGATGTTTAGCTTTTAGCCCGCATG
GGGCGTGGCAACGCGGCGCAGTGACGTCATGGCGTACCGGTGTATCTGAT
CGTAGCGCATCATCGGATGGAGGATGCGAGTTCGTGCCAACATAACAACA
TAATACAGCAGTAGTGCTGCTACTTTACAAGTATACTGCTACTACTACGA
CGATGCTAAACCACACGCCTTCTAAACATCGTCCGTGTGGATAGGATAAC
ATTGTATACGCCTCATAATCTTGATTCTTTTGTATTTGTGTTTTGTGTTC
CGCGCGAAATTTGTAACGTACCCCTACCCCTACCCACCCGCAATAACCCC
AAACAGTAGACTTAACTTCCCCCCCTGCCTCTGTCGTTTTTTTTCTTTTC
TTGTGTGACTTTGTGTGATAGGTTGACACGGATGGGAGCGGGGGCATCTC
CTTCGATGAGTTCGTGGCGATGATGCAGCTGGGGGAAGTGGAGACGGACT
TCACCAAGGAGATCAACGAAGCGTTTAAGTTTTTCGACAAGGATGGCGAC
GGAGAG GTAGGTACAATACCTAGGGTTTACTGTTTTTTACTTCTGGTGTT
GGTTTCCCACGTCCATGTGGTACATGGCCTGGTCTCTCGATTTTGTAGTC
TATGTACCCCCTCTGTCGGGCCGTGTAAACTATAACTATGTCACCGGTAA
TTTCCAGGAATACCCGCGTTTTCGCCCGTCGTTTGTTTGAGCGATAAAAT
GCACGCTCAATAGACTAATTTCTCGGCCCCGGCTATTTGAGTGTGCTGTT
TGAAGGTTGCATGTATCTCCTGTTGTCAACCGTCGCTTGTACGGGCCTTG
TCTTTTCGTATCCACCCGTTAGGTGTGGTGTTAAATTTGTGTTTTGCTTT
CATGCATGCATCCAAGCCTTTTGTCGTCGTTGCTGTTGCTGTTGCTGTTG
CTGTTGCTGTTGCTGTTGCTGTCGCGAAGGTAACGCCGTCGGAGCTGGCG
GAGATTATGCGGGGCCTGGGTGACAAGCTGTCTGACGACGAGATCAACCT
CCTCGTGAAGGTGGCAGACAAGGACGGAGATGGCACCATCAGCATCGAAG
A GTGAGAGTAAATACTGATACTTACAAACATGATTTGTAGCATCGGAAGA
GTGGTTGCTTTTGCTGTGGTGTTGACTTGTACCACGGGTATCGTACAAGT
ATCATACGTATGGATGATGTTTATCTCTCTTGATTAGGCGCTTCTAATGG
TATTATTTTGGTGCTACTGCTTTCCATTTACTTCGTATCCTTTTTTTTCG
GCCTCATTCCGGTGGAACACCTTTTTCCGGGGAAAGGTGCTCGTTGCTCA
TTGGCCGAATCTATGTTGCGTTGGTGACAGGCTGAATTTGTTTCTCATCT
CGAGTCAAGCCACGCCACAACCATCTGATGTTGGGCGTTTGGGCGTTACA
TTCATCCCGGCGCGCCCCTCCTCATGCCTGCCGCGTGCCCACCGTGTGAA
ACAGGTTCATCTCGTTCATGTACAGCTAA GCAGGTCGCCTCGACGCGTTC
GTCAAGTCAAGTCAAGGAAGCTTGTTTCTGCTTGGTGGTATAGGTCTTAG
TGGAGTGTATCTTTGCAATGTTTCAATATCCAGTATTCTATGCGGGATCG
GGCCGTATCCGCGGCAGCGCGGCGGGCGCGCCGTTTTCGGACGAGACATA
GCTCCGTTTTTGGTCAGGGGCGGCGGCGCTCGAGCACCAAAACGTAAGTT
TGGAGGCGGGACAGCAGCAGCTGCTGCTGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCGATTCGTTGGTTGCTTTTTGCGGCGGAACTGCTCCTCTCCTGG
CAGAGCCGTTTTGTGCTCTTTGTCCCAACAGGCGGTTGGTTTGGTTCTTC
GCGACAACAACAACCACCGTTGCTTGCGATGTGTGCTGCGCATGCATCCC
GCGGGAAGGCGAACGGCATATGTTCGCTTGGTATTTGTGCGAACCCTAAC
CCTAACCCTAACCCTAACCCCTGGCGATGTGCGGGGGTAGCGGGAGAGAA
GAGGCAACGTTTTTTGTGTGCCGTGTTGTGAGCACGGTAACAGCGGCGCA
TGTGATTGGTTGTCCGATCGAATAGTTACTTGATTAGAGCTATTTGTTGA
CGTAGAGCACGACAAATACTACTGCTACTGGTGGTGGCGTGTTAGGTGGC
CGCAACGTTTGTGGTGTCATCCTGAATTTTTCCTGCCGTGGTGTCTCCCT
GATGCAGCTGTCGAAATGGCGTTTGGTCATGAGGTTGGATTGGTTCTTGC
TTGGGAAGGAAAGGGCGGGAGTGCTAGGCGGAGAGGAACAGAGCGTGTTC
TTTTTTTCTGTGTAGCTCTGTGCCGCAGTAAGCGGCAGCGAGCACCTTAT
CCCTTCGCCCTGAAGGGTGAGAAAAGTGACGGCAGTAGCGGCGAAACCGT
GCCGGTGTATCGTGGAGTCGTTTTCTCTTGGTCTTTCTAAAGTGCATATT
TTTATGTTTTGTTTCAGTCCACTTTGTTTTTCAAGCGAGCAGCTGTTCTT
GGGGTGCGCACTGCGTGGGCACCGCGAATGGGAACACGTGGGGTTCTACG
TCAAAGTACCTCGAAAGTGTCCCTTATTTCGACTTGTTGCCGCTCTCTTT
TGTGCCGGCGCAAATTCAAATGGTGCGTTTATCTTGTCGTGTCTCTCACA
ATAGTATTTTTTTCTCTGCGAAGAGCACCTGTAGTGGCTGCTGATACGTG
TTCACGAAAGATTTTGTATCGTAGTTTACAGCAGTAGTGACGCGTTTCTC
ACACTCAAGTATTGTCGTGCGTTCCCCTTCGTAGAATATATCTGTCTGAT
GCCTGATCCACTGACCGGCGGTTTCCTTGTCGCGTATTTCCGCTCCAATT
TTTGTTGGTGCTGGGCGATACACGATAATAAGTCTAGATATTTAGGACAA
CACGTTTTGGAAATGCCCCGGCTTTCGACACGACATGACACCACGTTGCT
TTGAGAAAAGTCCATCATGCCGTTTGGTCCTCACCATCCTCTGTGGCCAC
GGAGAAAGCACAACCCTCT back to top Coding sequence (CDS) from alignment at C-linearis_contig98:491324..498392-
>mRNA_C-linearis_contig98.17137.1 ID=mRNA_C-linearis_contig98.17137.1|Name=mRNA_C-linearis_contig98.17137.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at C-linearis_contig98:491324..498392- (Chordaria linearis ClinC8C monoicous) back to top