Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 452 |
| Cds size | 339 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930838.6719875-CDS-C-linearis_contig98:474906..474956 | 1622930838.6719875-CDS-C-linearis_contig98:474906..474956 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 474907..474956 - |
| 1690881275.8429978-CDS-C-linearis_contig98:474906..474956 | 1690881275.8429978-CDS-C-linearis_contig98:474906..474956 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 474907..474956 - |
| 1622930838.6901748-CDS-C-linearis_contig98:474982..475271 | 1622930838.6901748-CDS-C-linearis_contig98:474982..475271 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 474983..475271 - |
| 1690881275.8515854-CDS-C-linearis_contig98:474982..475271 | 1690881275.8515854-CDS-C-linearis_contig98:474982..475271 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 474983..475271 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930838.723356-UTR-C-linearis_contig98:475271..475384 | 1622930838.723356-UTR-C-linearis_contig98:475271..475384 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 475272..475384 - |
| 1690881275.859986-UTR-C-linearis_contig98:475271..475384 | 1690881275.859986-UTR-C-linearis_contig98:475271..475384 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 475272..475384 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig98.17133.1 >prot_C-linearis_contig98.17133.1 ID=prot_C-linearis_contig98.17133.1|Name=mRNA_C-linearis_contig98.17133.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=113bp
MFYEMWVTVSRAPLGDMDRAGFSYLVHEVCAFFFLAERLPPPPRSNRSKQ
RFHPLRGRCLCGSGRRSTCSLWRHQILLRSLQHHTSVWCERGGGVQLSNY
RPAVVFVRCMFCF back to topmRNA from alignment at C-linearis_contig98:474907..475384- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig98.17133.1 ID=mRNA_C-linearis_contig98.17133.1|Name=mRNA_C-linearis_contig98.17133.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=478bp|location=Sequence derived from alignment at C-linearis_contig98:474907..475384- (Chordaria linearis ClinC8C monoicous)
GTATGTAAATATTAATGTTAGGACGAGGATTGGGTCGGACGGAGAAAGGT
GGGGTGGTCAATAAGAGCGATCCTCGTTGGGCGGGGCTTGGCGGTGGTGA
ATAGTCAACGTAAATGTTCTACGAAATGTGGGTTACAGTTTCGAGAGCGC
CGTTGGGGGACATGGACAGGGCGGGGTTCTCGTACCTCGTACATGAGGTG
TGTGCTTTCTTTTTTCTCGCGGAGCGTTTACCCCCCCCCCCCCGTTCCAA
CCGTTCCAAACAGAGGTTTCATCCTCTGCGTGGCCGGTGTTTGTGTGGGT
CTGGTCGCCGAAGCACATGTAGCTTGTGGCGGCATCAAATTTTGTTACGT
TCTCTTCAGCACCATACAAGTGTCTGGTGTGAAAGAGGAGGGGGGGTTCA
GTGTCAAACTACGGGGGGGGGGGTTCAGTATCAAACTACAGGCCAGCTGT
GGTCTTTGTCCGGTGCATGTTTTGTTTT back to topCoding sequence (CDS) from alignment at C-linearis_contig98:474907..475384- >mRNA_C-linearis_contig98.17133.1 ID=mRNA_C-linearis_contig98.17133.1|Name=mRNA_C-linearis_contig98.17133.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at C-linearis_contig98:474907..475384- (Chordaria linearis ClinC8C monoicous)
ATGTTCTACGAAATGTGGGTTACAGTTTCGAGAGCGCCGTTGGGGGACAT
GGACAGGGCGGGGTTCTCGTACCTCGTACATGAGGTGTGTGCTTTCTTTT
TTCTCGCGGAGCGTTTACCCCCCCCCCCCCGTTCCAACCGTTCCAAACAG
AGGTTTCATCCTCTGCGTGGCCGGTGTTTGTGTGGGTCTGGTCGCCGAAG
CACATGTAGCTTGTGGCGGCATCAAATTTTGTTACGTTCTCTTCAGCACC
ATACAAGTGTCTGGTGTGAAAGAGGAGGGGGGGTTCAGTATGTTCTACGA
AATGTGGGTTACAGTTTCGAGAGCGCCGTTGGGGGACATGGACAGGGCGG
GGTTCTCGTACCTCGTACATGAGGTGTGTGCTTTCTTTTTTCTCGCGGAG
CGTTTACCCCCCCCCCCCCGTTCCAACCGTTCCAAACAGAGGTTTCATCC
TCTGCGTGGCCGGTGTTTGTGTGGGTCTGGTCGCCGAAGCACATGTAGCT
TGTGGCGGCATCAAATTTTGTTACGTTCTCTTCAGCACCATACAAGTGTC
TGGTGTGAAAGAGGAGGGGGGGTTCAGTTATCAAACTACAGGCCAGCTGT
GGTCTTTGTCCGGTGCATGTTTTGTTTTTATCAAACTACAGGCCAGCTGT
GGTCTTTGTCCGGTGCATGTTTTGTTTT back to top
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