mRNA_C-linearis_contig98.17128.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig98.17128.1
Unique NamemRNA_C-linearis_contig98.17128.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A6H5K027_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K027_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 6.320e-61
Identity = 110/125 (88.00%), Postives = 116/125 (92.80%), Query Frame = 3 
Query:    3 KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFNG 377
            KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESM GRVKVP+ADLLP+AS AS+ LLEGLLVFDPPCR SA+EAL HRYFQPL G+IHV PDP VAPGFDFDFESEPMHQEQLRDMILQEVA F+G
Sbjct:  293 KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASVASVDLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRDMILQEVALFHG 417
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: D8LJT0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT0_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 3.890e-60
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 3 
Query:    3 KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFNG 377
            KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESM GRVKVP+ADLLP+ASEAS+ALLE LLVFDPPCR SA+EAL HRYFQPL G+IHV PDP VAPG DFDFESEPMHQEQLR+MILQEVA F+G
Sbjct:  238 KQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASLALLERLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGLDFDFESEPMHQEQLRNMILQEVALFHG 362
[Close]
BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.980e-38
Identity = 79/119 (66.39%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEV 362
            QL+LIFD VGSP+PHEV+HIRN +A +FLE+M  RVKVPYA+L   ASE +I LLEGLLVF PPCRLS +EAL+H YF PLR K    PDP V+PGF+FDFES+P+ + QL+ MIL EV
Sbjct:  283 QLTLIFDLVGSPKPHEVSHIRNSQAKKFLETMQDRVKVPYAELFAGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLR-KSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEV 400
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.190e-33
Identity = 75/121 (61.98%), Postives = 89/121 (73.55%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVAS 368
            QL+LIFD VGSP  HEVAHIRN +A RFL+SM G+ K PYA L P ASE +I LLE LLVFDPP RLS  +ALDH YF  LR    +  DP VA G +FDFES+PM + QL+ +ILQEV++
Sbjct:  256 QLTLIFDVVGSPSQHEVAHIRNNQARRFLDSMAGKDKQPYAALFPQASEQAIDLLEHLLVFDPPKRLSVADALDHPYFDALRTTEGLREDPPVAVGLEFDFESQPMARLQLKQLILQEVST 376
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 119 bits (298), Expect = 6.750e-25
Identity = 57/126 (45.24%), Postives = 88/126 (69.84%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFES-EPMHQEQLRDMILQEVASFNGE 380
            QL+LIFD +G+P   +VAHIRN +A +FL+S+  R++VP+A+L P A+  ++ LLE  LVF P  R++ +E LDH YF PLR     +  PV++ GF+FDFE+ E + + Q++ ++++EV SF  E
Sbjct:  244 QLTLIFDVIGAPDAEDVAHIRNSQARKFLDSVADRLRVPFAELFPGATAPAVDLLERFLVFHPANRMTIDECLDHPYFDPLRTGETPSEPPVMSSGFEFDFEADETITRLQMKQLVMREVDSFRAE 369
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.640e-24
Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVA---------PGFDFDFESEPMHQEQLRDMILQEVASFNGE 380
            QL+LIFD +G+P+P EVAH+++ +A RFL+S+  + KVP+A L P AS  +++LL  LLVF+P  RL+ ++AL H+YF+PLR  + +    + A         P  DFDFE+  +++ QL+ MI +EV SF  E
Sbjct:  255 QLTLIFDVIGAPRPQEVAHVKSSQAKRFLDSVAAKKKVPFATLFPEASREALSLLNSLLVFEPAHRLTVDQALGHKYFEPLRHSVQLQQQQLAADAAQAARPPPKLDFDFETGHLNKGQLKQMIQREVESFRVE 388
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A061GXY1_THECC (Mitogen-activated protein kinase n=9 Tax=rosids TaxID=71275 RepID=A0A061GXY1_THECC)

HSP 1 Score: 92.0 bits (227), Expect = 6.230e-16
Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFN 374
            Q+ L+ + +G+P   ++  +RN +A R+L  +    + P A++ P     +I L+E +L FDP  R++ EEAL H Y + L     +A +PV A  F FDFE +P+ +EQ++DMI +E  + N
Sbjct:  252 QMRLLTELLGTPTESDLGFLRNEDARRYLRQLPAHPRQPLANVFPHVHPLAIDLIERMLTFDPTRRITVEEALAHPYLERLHD---IADEPVSAEPFSFDFEQQPLGEEQMKDMIYKEAIALN 371
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A6A1WLC8_9ROSI (Mitogen-activated protein kinase 3 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WLC8_9ROSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.660e-15
Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:    9 LSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFN 374
            L      +G+P   ++  +RN +A R++  +    + P A + P  +  +I L+E +L FDP  R++ EE+L H YF  L     +A +PV    F FDFE +P+ +EQ++DMI QE  +FN
Sbjct:  252 LGFFASLLGTPTESDLGFVRNEDARRYINQLPQHPRQPLARVFPHVNPLAIDLMEKMLTFDPAKRITVEESLAHPYFARLHD---IADEPVCPEAFSFDFEQQPLDEEQMKDMIYQEALAFN 370
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BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: M5VZP6_PRUPE (Mitogen-activated protein kinase n=8 Tax=Prunus TaxID=3754 RepID=M5VZP6_PRUPE)

HSP 1 Score: 89.4 bits (220), Expect = 4.560e-15
Identity = 43/125 (34.40%), Postives = 73/125 (58.40%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFNGE 380
            Q+ L+ + +G+P   ++  +RN +A R++  +    + P A L P  +  +I L++ +L FDP  R++ EEAL H Y + L     VA +P+    F FDFE +P+ +EQ++DMI +E  + N E
Sbjct:  247 QMRLLTELLGTPTESDLGFVRNEDARRYIRQLPPHPRQPLARLFPHVNPLAIDLIDRMLTFDPTKRITVEEALAHPYLERLHD---VADEPICNEPFSFDFEQQPLGEEQMKDMIYREAIALNPE 368
[Close]
BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Match: A0A7J8LJV0_9ROSI (Protein kinase domain-containing protein n=3 Tax=Malvoideae TaxID=214907 RepID=A0A7J8LJV0_9ROSI)

HSP 1 Score: 86.7 bits (213), Expect = 5.530e-15
Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 3 
Query:    6 QLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPLRGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFN 374
            Q+ L+ + +G+P   ++  +RN +A R++  +    +   A++ P     +I L++ +L FDP  R++ EEAL H Y + L     ++ +PV    F FDFE +P+ +EQ++DMI QE  + N
Sbjct:  126 QMRLLTELLGTPTESDLGFLRNEDARRYIRQLPAHPRQSLAEVFPHVHPVAIDLIDRMLTFDPTRRITVEEALAHPYLERLHD---ISDEPVCPEPFSFDFEQQPLGEEQMKDMIYQEALALN 245
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K027_9PHAE6.320e-6188.00Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LJT0_ECTSI3.890e-6087.20Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
D8LJT1_ECTSI2.980e-3866.39Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z9A0_9STRA1.190e-3361.98Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S3XUM8_HETAK6.750e-2545.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DEH4_9STRA7.640e-2444.03Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A061GXY1_THECC6.230e-1635.77Mitogen-activated protein kinase n=9 Tax=rosids Ta... [more]
A0A6A1WLC8_9ROSI2.660e-1535.25Mitogen-activated protein kinase 3 n=1 Tax=Morella... [more]
M5VZP6_PRUPE4.560e-1534.40Mitogen-activated protein kinase n=8 Tax=Prunus Ta... [more]
A0A7J8LJV0_9ROSI5.530e-1532.52Protein kinase domain-containing protein n=3 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:423344..430322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue3.5e-37
Seed eggNOG ortholog2880.D8LJT0
Preferred nameMPK11
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
Ec32 ortholog descriptionmitogen-activated protein kinase
Ec32 orthologEc-23_000020.1
EC2.7.11.24
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons6
Model size3672
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17128.1prot_C-linearis_contig98.17128.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig98 423442..426455 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.1244442-UTR-C-linearis_contig98:423343..4234411622930842.1244442-UTR-C-linearis_contig98:423343..423441Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 423344..423441 +
1690881277.6412492-UTR-C-linearis_contig98:423343..4234411690881277.6412492-UTR-C-linearis_contig98:423343..423441Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 423344..423441 +
1622930842.260502-UTR-C-linearis_contig98:426455..4264581622930842.260502-UTR-C-linearis_contig98:426455..426458Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 426456..426458 +
1690881277.7163246-UTR-C-linearis_contig98:426455..4264581690881277.7163246-UTR-C-linearis_contig98:426455..426458Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 426456..426458 +
1622930842.2726471-UTR-C-linearis_contig98:427378..4303221622930842.2726471-UTR-C-linearis_contig98:427378..430322Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 427379..430322 +
1690881277.7288256-UTR-C-linearis_contig98:427378..4303221690881277.7288256-UTR-C-linearis_contig98:427378..430322Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 427379..430322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.1430564-CDS-C-linearis_contig98:423441..4234591622930842.1430564-CDS-C-linearis_contig98:423441..423459Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 423442..423459 +
1690881277.6565251-CDS-C-linearis_contig98:423441..4234591690881277.6565251-CDS-C-linearis_contig98:423441..423459Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 423442..423459 +
1622930842.1603134-CDS-C-linearis_contig98:423743..4238771622930842.1603134-CDS-C-linearis_contig98:423743..423877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 423744..423877 +
1690881277.6680167-CDS-C-linearis_contig98:423743..4238771690881277.6680167-CDS-C-linearis_contig98:423743..423877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 423744..423877 +
1622930842.20174-CDS-C-linearis_contig98:424453..4245621622930842.20174-CDS-C-linearis_contig98:424453..424562Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 424454..424562 +
1690881277.679532-CDS-C-linearis_contig98:424453..4245621690881277.679532-CDS-C-linearis_contig98:424453..424562Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 424454..424562 +
1622930842.2182527-CDS-C-linearis_contig98:425888..4260321622930842.2182527-CDS-C-linearis_contig98:425888..426032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 425889..426032 +
1690881277.6902995-CDS-C-linearis_contig98:425888..4260321690881277.6902995-CDS-C-linearis_contig98:425888..426032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 425889..426032 +
1622930842.2379024-CDS-C-linearis_contig98:426233..4264551622930842.2379024-CDS-C-linearis_contig98:426233..426455Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 426234..426455 +
1690881277.703342-CDS-C-linearis_contig98:426233..4264551690881277.703342-CDS-C-linearis_contig98:426233..426455Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 426234..426455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig98.17128.1

>prot_C-linearis_contig98.17128.1 ID=prot_C-linearis_contig98.17128.1|Name=mRNA_C-linearis_contig98.17128.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=209bp
MHGRVKVPYADLLPSASEASIALLEGLLVFDPPCRLSAEEALDHRYFQPL
RGKIHVAPDPVVAPGFDFDFESEPMHQEQLRDMILQEVASFNGEEEDEQE
EAEEDIDQGQGQHIHGKHQHQYQHHQHHQHQRQQQQQQQQQQQQQHIQHM
MGNRGYIQNNADYAPYNGNINMNMNQANGAGAGYNEHEHMSRSGACPSEA
PRHGHSLR*
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mRNA from alignment at C-linearis_contig98:423344..430322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig98.17128.1 ID=mRNA_C-linearis_contig98.17128.1|Name=mRNA_C-linearis_contig98.17128.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6979bp|location=Sequence derived from alignment at C-linearis_contig98:423344..430322+ (Chordaria linearis ClinC8C monoicous)
AGAAACAGCTTTCTCTCATCTTCGACGCTGTTGGGTCTCCCCAGCCGCAC
GAGGTGGCGCACATTAGGAACCCAGAGGCGATCCGCTTTTTGGAGTCGAT
GCATGGCCGAGTCAAGGTATGGAGGATGAAAGGCACCTGGCGGCCAGCAC
GCACCTTCTTCGCTTGAAAACACCACATCAGGATGTCTCACAACGTTGGA
CGAGCACGCACCTTCTTCGCTCGAAAACATCACATCAGGATGTCTCACAG
CGTTGCACGAGCACGCACCTTCTTCGCTTGAAAACATCACACACATCAGG
ATGTCTCACAACGTTGCACGAGCACGGGCGTGCCTACATACTCCGAGTAC
GCACGTTGATCTAAAGGAGGGGGCCCCGCGCGTTGTAAAACAAATCGCAG
GTTCCCTATGCCGACCTGCTACCGTCCGCATCCGAGGCATCCATCGCTCT
CCTCGAGGGATTGCTGGTGTTCGACCCGCCTTGCCGCCTGTCAGCGGAGG
AGGCTCTGGACCACCGATACTTCCAGCCTCTCAGGTGAGCTTTGCGAAGA
GTATGTAGTGATGCGAGAAAAAAACTAAACGGGGCCATACGCCCGCGCAC
CGCGGTACGCAAGCGTACAGCAAAAGCCGTGTTTCTTTCCCTGTCCCCAT
GGCGGCAGAGAAGCACGGGGGCGGTATCTATCGGGACGGCGAGTCGTAGA
AAAAATCCGGCATTTCTCCTCCTATGTATCTATTTTAAACAGTTGGCTTT
GCGCTGGAACCGGCTTGCCACGGTCACAACACGGTCACGAGGCATGATAT
TAATTCATTCAGTCTATCGATCGATCTCGATATCTCGATATCTCGATATC
TCGATATGTCGTTGTCGATCGATCCCCCTTTTCAGCTTCTAGCTTTTTTA
CTTTACTACCTGAAACCGTTCCTTTGGGCCAGGCCAGGCCAACCCACGGC
TACAAGGTCTAGAGTGCCCAACCTACACTTTCCCGCCACTCCCTCCACGC
GCTTTGTTTGTTGGTTCCCCTGTGCCCTTACTCTCTCTCTCTCTGTCTGT
CTCTGTCTGTCTCTCTGTCTGTCTCTGTCTGTCTCTCTCTGCCTCTCTCA
CCCCGAGTAGAGGCAAGATTCACGTCGCCCCAGACCCGGTGGTTGCCCCT
GGCTTCGACTTCGACTTTGAGAGCGAGCCCATGCACCAAGAGCAGCTGAG
AGACATGATCTTACAAGAGGTGAGGTACATACCATACGCACACGCTTCCA
CGTACGTGCGTGTTTGACTTTCCTGGCCATTTTTGCGGATATCGGGTCAC
ACTCGGGGATGGGGGCGGGGGCGGCGTCACAACCATCAGCTTACTTTTTC
TTTCGCCCACCGCCTCCGATGTTGTGGTTATTATATTCGGCAACAACTTT
CCGAAAGTCCTTTCCACTCCTTCATTGATCCTTTTTTTTGTTAGATAACA
ACATATCCACTGTACTAAATAGTCAGCCGTTGACTGTTAAGTACAGTGGA
TAAGTTGTATATCTAACAAAAATACAACCGGGGTCCGACCTCTCCGCGAC
CATTTTGACGCCTTTTTTCTGCAAAAAGAAAATTTGTGAAAAAAAGTCTG
GGATACACTGACCTGAAAGCCATGGTATATGGTATACATCACAAGTCGTC
AAGATGAAGGCACTTATTATCCCCGCCTGTTAGCCGATGAACCGCTTGGG
GCAGCGCCGATTCGAGGGATTACAACGAACCCTCGGGTGAATACCGGAGT
CCAATAACAATAACACCTGGTCGACACCTGGTCGGACCCCGGTTGGTTGT
ACTTTTGTTACATAACAACATACTACTTCGTATTATAATATAGACTATAT
TTATATATCGTATCCAGTGTATGTACTAAATAGTCAGCGCTGACTGTTTA
GTTTAGTACAGTGGATAAGTTGAATATCTGACATTTATAAATCGTATCCA
GTGTACTAAATAGTCAGCGCTGACTGTTTAGCTTAGTACATACAGTGGAT
AAGTTGAATATCTGACATTTATAAATCGTATCCAGTGTACTTAATAGTCA
GCGCTGACTGTTTTGTTTAGTACAGTGGATAAGTTGAATATCTGACATTT
ATAAATCGTATCCAGTGTATGGTACTAAATAGTCAGCGCTGACTGTTTAG
TTTAGTACAGTGGATAAGTTGAATATCTGACATTTATAAATCGTATCCAG
TGTACTAAATAGTCAGCGCGGACTGTTTAGCTTAGTACTACAGTGGATAA
GTTGAATATCTACCATTCTACCATTCTACCATTCTACCATTCTAGCATTT
TTGACGCGGGGCGCGATGGTTTGAGGGTACGCACGCACATATATATGTGC
TTCGAAGTACGTGCAGTAGATTCGTTTCGATTGACACTTGTTTCGATTGA
CACTTACTTCCTCTGCTCGGGGAGGCGCAAGAGAGCAAAAAAAAAGCAAA
ACCACCATCAGTATTAACGGTGCCCTTAACCCCCTTGGGTACTACGTACG
CACGTGCCTTTATGCCTATTAAACTATTTATATTCCCCCTCTCAGGTGGC
ATCGTTCAACGGAGAGGAGGAGGACGAGCAAGAGGAGGCGGAGGAGGATA
TCGACCAGGGGCAGGGGCAGCACATCCACGGCAAACACCAACACCAATAC
CAGCACCACCAGCACCACCAGCACCAGCGCCAGCAGCAGCAGCAGCACCA
CCACCACCACCAACAACAACACCACCACCACCACCACCACCACCAACAAC
AACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAGCAA
CAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACACATCCAGCACATGATGGGCAACCGCGGC
TACATCCAGAACAACGCCGATTACGCCCCCTACAACGGCAACATTAACAT
GAACATGAACCAGGCCAACGGTGCCGGGGCCGGCTACAACGAGCACGAAC
ACATGAGCAGGAGTGGCGCGTGTCCGAGCGAGGCCCCGCGTCACGGCCAC
AGCCTCCGGTAGCAGGTGAGTCGGCTGTCATATAAGAAACATCTGTGTAA
TATCTATCAGTTTTTTTTTTGGAAAAGAGTAAATTCGATGCTGCCGGCGT
TAAAACAGGCAAACGCGCCGCCCGTTGACAGCAAAACTACACCACACTTG
CAGAACTTTTTTTTAAGTAGTATGCGTGCAGCGTGTTTACTACCGTCGGA
TAGTAGTGGTCCCGAGTTTTAAACGGTTTCCGCCCACACAACGTTCAAAA
TGAGTTGTGTGCAAGGGGGGTTGATTCTCGAACGTGAGGGTTGTAATTAT
ATTATTTTCATGGGTCGTGCTTCAAATGTTAATGTTTACATACGTACCGT
GTGAACTTTTAAAAAGTACACGTACTGCCTGTACATACAAACATACGTGT
TGGGCGAGTAGTGTCGTTGGACAGCGGTCGTAGACTATTATTATTGCGGT
CAAAAATCATTGAACGTGGAGAGCGTTTCTCTCCGAGAGCAACCCCTCCA
CGAAGAAAATCATTCCTCCATCCAGTGCTTTCCGCCCTTCCTTGTCTCCT
GGTGTCATATTCATCACCCTCTGTGCACCCGGTGTGTCGTTGGACAGCGG
TCGTAGACTATTATTATTGCGGTCGAAAATCGTTGAACGTGGAGAGCGTT
TCTCTCCGAGAGCAAGCCCTCCACGAAGAAAATCATTCCTCCAGTGCTTT
CCGCCCTTCCTTGTCTCCTGGTGTCATATTCATCACCCTCTGTGCACCCG
GTGTGTCGTTGGACAGCGGTCGTAGACTATTATTATTGCGGTCGAAAATC
ATTGAACGTGGAGAGCGTTTCTCTCCGAGAGCAACCCCTCCACGAAGAAA
ATCATTCCTCCATCAAGTGCTTTCCGCCCTTCCTTGTCTCCTGGTGTCAT
ATTCATCACCCTCTGTGCATCCGGTGTTTCTGCAGGTGTCCCACTTTGAC
GGAGCACACGTAGGTGCCGCAGCAGCAGCAGCGATTATTCGCTGAGGCAT
GGAGCACCGAGCAATAATGCCTTTAACAACTGTGTTTTGAAGAGACAGCC
GGCGAAGATGCACGTTGGAGTAGACTATCAGGCGAGTCTCCGAGGCAACT
ATCTCCAGTTCCCAGCCATCAGTCGGTCGGAAAGTCGAGGGCAGATTTGT
TCAGAGACGTGGAAGATAGAATAAACCGTTGTTTATTGAAACCGTCGAAT
TGGCCGGAGGCGTTGTTGTTCCTGAATTCCGGGGTGGTGATGTTTCACGA
GGAACTTTGAGTAGCAGCCCACTCCTGGGGAAGCGTCCACCATCGAGTAA
TAAACTTGAGCACGCTAGAGAGGGTGAGTAAGGGATACACAGTAAGTAGT
GGACAGAGAGGGAGAAGATATTTATTTGGGGTCGGCCAGAGTTGGAACCG
CCGAGGACTTTGGGTCTTTTTGACGCCCACCCACCCTCTACTTCCGAAGG
TGAGGGAATGGAAGGGACTGTATGACATAGGCAAGGAAGGGTGAAGGAAA
TGGTAGACTACCATTTGGGACTTGGTCATAGAAGAAGAATGGTGGTACGT
GCAGCAGTAGGAGCGTTCCCTAGACTGGGGAAGAGAAACCCTGGCTGATA
GATGAAGGGAGAGAGAGGGAGAGTTTTAATGGGCAGACACGGCGGTAGTT
GAGATGCAGGAAATGACCGCTAGAAAACCGTGTTCTGTCAGATTGGTTTT
TTCTCTCTCTCTCTGCCTCGGGGTTTGAGGTAAACAATAACAAAGAGAGG
CAATTCGAAAAAATAATAATAAATAAATAAATGGGTATTTGTATATGCAC
AACAACAACAGGTGAAGCTCCCCAGTGGTTGTGGTACGGCGGTTACGCGT
GGATCCTTTGGAGTTCGAAAGAGCTGAGACTGTTAATGGCTGCGTGAAAC
GGGCAGGGTTGGTTCGGATCTTGTCTCTCTCTTAGTCTCTAAAATAGCAC
AACCCAACGAACGATGGTTTGAATGAAGCTCTCGGGGCGTTGTATCATGC
CCGCCCAAGTTCGAGAAACAATGAATAATGGCAAAGAAGGGGGGGCCGAA
AGAAAATACCGTGCGTACGTATTGAGGGGGTTGGGTATGTCATGTAGGAG
TATTTATGTAATATCATGCGTATTGTCTTGGGGGTTTCTTTGAGAGAAGG
GTTCAAGCTTGATATTGTTAAACGTTGGTTGGTGGTGGTGGATGTTTTTG
GGAGGGGAGGGGCAAAAATCGCGCTAGCTTTCCTTGATAGTTCGTTCGTT
TGTTTTTCCGAAAGCAGCGTTCGTTTTCCTGTTTGCCAAAACGACTTGTG
CGCGCTGTCGAGTATTCAATAACAAGTCTACCTAGCCGATGAAGCACACT
GTACAGGCGGGTGACACAAGACGGAAGGAAGACGTATCATACGAATAAAG
TTTGGTGATACTAGAATAGGTATGCACGCGAGGGATCAAGTATCTTGAGA
GAGAAGGTTCAATGAAGTGTCGTGGGTTCTCAGGTAAGTTTATTTTCTGA
TGGAAGCGAGGTCAGGTGGTGACCGCAGGCAGGAACGGGCGCCTCGTGTG
AAGTACATACATACGTACGTACGTCAGCAATAAAGTGAATGGCGTCGTCA
AGAGGCTGCAATTGGCCGGGGCCTTGCACCGGAGTTAAGGTGCGTACTTT
TTAGGCAAGCAGACGAAAATCGGTTCATTGTAGACTAAATTACGACATAC
GGGACACCATTACTATGCGAGCGAGAGGCTGTCTCCGCCTTGCTTACCCA
ACGGGCGGGGTCAATACGTTTTTAAGTAAGTTGTGTAGTTGCAGAGGGTT
ATCCACGGGGGAGTCAGTCGTGTAGAAATAATAGGTAAAAAAGGTGAGCA
CAAGTTGTAAGGTAGCATTGATTGGATGTTTGGCGGGGAACATCTGGGCT
ATTATCTCTTGAGGGAGAAGAACCAGCTTAAACGATTGGCGAACGGTCCG
ACCGAAGCGTCGTGCACCATTCTTTCTAGAATAAGATTTTGATCGACTCT
GAACTCTAGGGTGGGCATGCTAACTAATTGAATTTTAATTTTTTTCGGGT
GGATTCAAAATTCAAAGTGATGAGCGCACCAACGGGCGTCATTAATTGTA
TCGTTTGTAGCATTTTTCCTTCGGAGCATATTTAATTTGGCTCGAGTTTT
GAGTTTTGAGTTTTGGGGTTTGGAATTTTGGGTGGTATTCTGTCACCTCG
GGGGGGGGGGAAGACGCATTTTCTCTCTTTTGTTGTGGTGGAAGCAAACA
CACTACTTCTGCCGAACGGTTGAATTTTGGGCGGTGCCCTCGCTGCCCAC
CAAGGGTTAAAGGTTGGCTTGGCCAGCTATATTTGGGGGGGGGGGCAGCA
AGTTGCCCTTTCCCCCCGCCCGCCCGCCCAACCACCCTTTTGTTTCGAAG
GTGGGGGAACGGGAGGGAACGGGCCACGCGTGGGTGGGTGGTTGTGGTGA
AACGGTACCATTTTGAGACGTGGTCACTAAGGCTTTTCGTACAACAAACC
GAAGAGCCCCTTGTAGGCCTAGAGGTCGGTGCAGTGATTGAATCCGGCCG
CTGTGCTCTTCGAGGGTCAGGGATATGGATGAGGGTATGGATGGGCGAAA
AGATGCAGCAGAATAGGTGTACAGGGCGTCTACTGCTGGGAACGAACGAA
CGAACGTACTCTGCGCGTGAACGAGTGTTTTTTTTTCTCTATTTTCCCTC
TCGGGGTCTAGACTTGTCGAAAGAACCAAATACATAAGGCAATTCGAAAA
GAAGACGAACATACGCAGAGAAGATCGCGCCGTCGCAGCTCAGTCCAGTG
TGCACGTGGGGGCGATTCGGTGGCGTGGGGGTGCGCAGCAAATCTGTCGA
CGTTTGTTTTGAATCGCGCGGCTTGGGAT
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Coding sequence (CDS) from alignment at C-linearis_contig98:423344..430322+

>mRNA_C-linearis_contig98.17128.1 ID=mRNA_C-linearis_contig98.17128.1|Name=mRNA_C-linearis_contig98.17128.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at C-linearis_contig98:423344..430322+ (Chordaria linearis ClinC8C monoicous)
ATGCATGGCCGAGTCAAGATGCATGGCCGAGTCAAGGTTCCCTATGCCGA
CCTGCTACCGTCCGCATCCGAGGCATCCATCGCTCTCCTCGAGGGATTGC
TGGTGTTCGACCCGCCTTGCCGCCTGTCAGCGGAGGAGGCTCTGGACCAC
CGATACTTCCAGCCTCTCAGGTTCCCTATGCCGACCTGCTACCGTCCGCA
TCCGAGGCATCCATCGCTCTCCTCGAGGGATTGCTGGTGTTCGACCCGCC
TTGCCGCCTGTCAGCGGAGGAGGCTCTGGACCACCGATACTTCCAGCCTC
TCAGAGGCAAGATTCACGTCGCCCCAGACCCGGTGGTTGCCCCTGGCTTC
GACTTCGACTTTGAGAGCGAGCCCATGCACCAAGAGCAGCTGAGAGACAT
GATCTTACAAGAGAGGCAAGATTCACGTCGCCCCAGACCCGGTGGTTGCC
CCTGGCTTCGACTTCGACTTTGAGAGCGAGCCCATGCACCAAGAGCAGCT
GAGAGACATGATCTTACAAGAGGTGGCATCGTTCAACGGAGAGGAGGAGG
ACGAGCAAGAGGAGGCGGAGGAGGATATCGACCAGGGGCAGGGGCAGCAC
ATCCACGGCAAACACCAACACCAATACCAGCACCACCAGCACCACCAGCA
CCAGCGCCAGCAGCAGGTGGCATCGTTCAACGGAGAGGAGGAGGACGAGC
AAGAGGAGGCGGAGGAGGATATCGACCAGGGGCAGGGGCAGCACATCCAC
GGCAAACACCAACACCAATACCAGCACCACCAGCACCACCAGCACCAGCG
CCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACACATCCAGC
ACATGATGGGCAACCGCGGCTACATCCAGAACAACGCCGATTACGCCCCC
TACAACGGCAACATTAACATGAACATGAACCAGGCCAACGGTGCCGGGGC
CGGCTACAACGAGCACGAACACATGAGCAGGAGTGGCGCGTGTCCGAGCG
AGGCCCCGCGTCACGGCCACAGCCTCCGGTAGCAACAACAACAACAACAA
CAACAACAACAACACATCCAGCACATGATGGGCAACCGCGGCTACATCCA
GAACAACGCCGATTACGCCCCCTACAACGGCAACATTAACATGAACATGA
ACCAGGCCAACGGTGCCGGGGCCGGCTACAACGAGCACGAACACATGAGC
AGGAGTGGCGCGTGTCCGAGCGAGGCCCCGCGTCACGGCCACAGCCTCCG
GTAG
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