mRNA_C-linearis_contig97.17111.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI) HSP 1 Score: 1664 bits (4308), Expect = 0.000e+0 Identity = 1318/2421 (54.44%), Postives = 1488/2421 (61.46%), Query Frame = 3
Query: 285 MPGSYPSGNAGEEPP-TIDLTFLALRDACQSDDGPSQQHL-----------PALAS-----DTPLFTSILRAVLLQQGDKERENKLED-LAHATPGVFPVLTRLLAADE----ALAGCSSSSSAARVDVSNPSSSAPXXXXXXXXXXXDSLPPAASTA------GSHEVDHRPTRSMAPFKIA------SISTLADVQQKLLPANTPRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQELPRGLITAGSKVIGAVQTFLLDAADAVVRSFDLAEPWRLDDGRLPKTLSVIIHQSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSAGDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISLDGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLDVPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRRQSVAGGAPGNQDGKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLKACFTEWTKILVMVQHMAPQVRQQRMHVEREERDWMFAFNINISLTSLFECMLGWLREPMGNASIPAGFFSSKTPPP--------------------PSPAQPRPPHSDSKDKCSRRIADSGDVESSAPTVVPLPAGMVRQPSMPSPXXXXXKQHMVEVGGDGIEDE-VFGDGVAAAAGSEXXXXXXXXXXXXXEGGEGAPLH-WAGPGANAAMSSFLASHTVGEAAAPXXXXXXXXXXXGGTRDVGGGRGSA----------------AWEHQALPMYPRDVLRVRPPSAGRSFHIILHRFFSAMIRESANCEERESDLRALANLVASHPEVATDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLVAVQFAGLSCGAPQLVNHVLHKFQCFY-WIFDEYNFQTPRRGGEQGXXXXXXXXXXXXXXXXXXXXXXXXXAGTRPVPPINIFSDPSAAHGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------DTNQQLALGEECLLLLILLVTEMPVVPDPLHRKQSNGAGCTGIEEQKCRGGVDSSSEVAGEAEGGMNSRLARQLRRELVHRLASAPCTHSELQDTCYATSHNETLEAELMEAVLRDVATRREPTNALEPGKFVLRPAVFAAEYDCTFFHQSIQAHQQASERRPPIKRPTPVAPPPPEAHPLFKQLRVDLLKSETMIRGVGQVLLGCARKYPGRWRDTLLLRGLHLLTLAVHVLRPSPTSTXXXXXXXXXXXXXXXXXXXXESGLAGDRDGASGSDGDVEAFCVAITEPIVRRPLPPTPAAGVP------------------------------LGDGDAMRASASTPNFWGELDDVFSNLSSSGGALGVAFSHSAESASLGRASMAAAATVASETSAPVSVLQLLLELDAAPWEQNDKLISCGVKWLLARLSGMSERCREIIIPTPGPSYAATTTATLPYTPSRGGT--YTGXXXXXXXXXXXXPLFDRGXXXXXXXXXXXXXXXRKRAMDMIERKASTFAKTMAMLGSSXXXXXXXXXXXXXXXXEGTGIFGGARNNRGRGRRSGRAASGASPSAGRDGDTAGPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRETQQECIVCRDNSDGGTLGLVGFGRRSLVQDVRPDAQRRCPGVHLQFCGHAMHYSCFDQYYATVVQISDNHNDVALDVKRGEFHCPLCKAVGNLMVPYFVPGDEGSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPSSGERGLVEGTRSRGSSPDAMDVSEDEQHPGSSSGGAAATAAGADIPAASGDGDSGRGAVGGNPGGCWLDRKAEVSLEMAPPSAXXXXXXXXXSRAGQSNPLTT-------RTGSRFGLLAMDRNTDNDDKEXXXXXXNVEGAAEQXXXXXX----EHFDLATKRFLESVYEVETDLTAVPPSVTPETLFLCACRALAYSVSSAAAATSPLDSLRGHAAXXXXXXXXXXXXXXXXXXXXXXAIDHGDANRLRCLRLVAEALRKAAGQAGLEETVRRKLVESLRGKEK-GAPLLPSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGDLNIVHALLKWQRKEEQ---------------------LEDP--DKPLVLTGAMEMLGTSLVVLPAGDVTGARHCVGALCLVRILQVLSVPRFKEQRHKPEVLEVESLFLD 7106
MP P N G+ ++DLTFLALRDA + PA S +TPLF SILRAVLLQQ E + + L H TPGVFPVLTRLLAADE ALAG + AA + P + P +S S H T+ ++ SIS+L+DVQQKLLPA+TPRRVCQYAFLKNDIVWICK CQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWD RGFC HHGLDNRDP+ ELP+GLITAGS V+ AVQTFLL+ + AVV+SFDLA+PW GR PK++S+I+HQS++ ENQ+ +AL SVAN+G+A +HQ GDG A D E+ R + RE+ERL+ +AR L++RGLLISVRT ++ RLKR+ DVVRWLHAVS LSDGCCRLVC+MLDVPTLV LMEAD HL K LA A+HDLYLALMADQPFKTRIAAAY +ALP VTANYARG+GTAE+ALYTLSVQFLNRSAFVK+LVEKHHLLQIL+GCL+STL+ AC+RQ GGAPGN+DGK+VL ASHSVL HRRYNPI ADLKCVLNIEGVPQRFL+ACFTEW K+L+MVQ MAPQVRQQR+HVERE+R+WMFAFNINISLTSLFECMLGWLREP G+ SIPAGFFSSKT PSP S + AP + Q + P+PXXXXX +V D +E+E VF AA XXXXXX +G EG P WAG GANA M FL A XXXXXXXXXXX RG+A AWEH+ LP +P VLRVRPP+AGRSFHIILHRFF+AM+RE+ NCEER SDLR L V +PEV TDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEP+FCKIFRDLDL+ VQFA LS GA QLVNHVLH+FQCF+ WI DE + T XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX D +QQLALGEECL+LLILLVTEMP+VPDPL + +G G RGG + G A GG R+ARQLRRELVHRLASAPCTHSELQDTCYA+SHNE LEAE+MEA+LRDVATRREP+NAL+ G+FVL+P VFAAEYD TFFHQSIQAHQQASERRP IK PTPVAPPPPEAHPLFKQLRVDL+K ETM+R VGQVLL C+RK PGR RDTLLLRGLHLLTLAVHV+ PS S+ XXXXXXXXXXXXXXXXXXX G+ D+EAFC A+ +P+V+ + D A R T WGELD V+++ S SL A E P+SVLQLL+ELDAAPW+Q+DK +S VKWLL RL+GMSERCREII PTP P+ PS GG +G XXXXXXX XX RKRAMDMIE+KAS FA+ + M+ XXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +E + ECIVCRD++D G LG VGFGRRS V DVRPD + R PGVHLQFCGHA+HYSCF++YY T+VQISD++N+VALDV +GEFHCP CKAVGNLMVP F E +S XXXXXXXXXXXXXXXXX G+ L +G + D MDVSE+E SSG ASGDGD G WLDRKA +SLE A PS XXX RTGS F + XXXXXX XXXXXX + FD AT++FLESVYEVET +T V PSVTPE LFL ACRALAYSVSSAA SP+DSLRG+AA XXXXXXXXX XX AIDHG A RLRCLRLVA LR+AAGQAGLEETVRRKL SL G G L XXXXXXXXXXXXXX + D+ A + +R +++ E+ D+PL+L GAME LG +LVVLPAGD GA CVGALCLVR+LQVL+ F++Q + E+LFLD
Sbjct: 3 MPADEPDENPGDASSVSVDLTFLALRDASRQGGXXXXXXXXXXXXXXXXXXPASTSCCRPSETPLFGSILRAVLLQQQAGEGGGEQDQSLVHTTPGVFPVLTRLLAADEVCQPALAGAADR--AATAGGAGQQQRQPGHHQLRLQQLESAHQPRSSPTPKDALVASSRARHDDTQGGGGGDVSHSNSLVSISSLSDVQQKLLPADTPRRVCQYAFLKNDIVWICKECQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDYRGFCRHHGLDNRDPLLELPQGLITAGSTVMAAVQTFLLETSKAVVQSFDLAKPWNTSGGRPPKSVSMIVHQSLYEENQVYEALGSVANLGMANVHQ-----------------------------GDGAA---------------------------------------------DPERER-EARELERLLDVARALAKRGLLISVRTHELQERLKRSQDVVRWLHAVSTLSDGCCRLVCEMLDVPTLVALMEADTHLPKPLACALHDLYLALMADQPFKTRIAAAYVRALPAVTANYARGVGTAEHALYTLSVQFLNRSAFVKKLVEKHHLLQILAGCLLSTLSRACQRQPARGGAPGNRDGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFECMLGWLREPFGHTSIPAGFFSSKTTXXXXXXXXXXXXXXXXXXXXXXPSPV------SSGEXXXXXXXXXXXXXXXXAPLAL-------FQLASPTPXXXXXXGEVVSWWADILEEEHVF------AAAXXXXXXXXASEGEEKDGAEGEPWQPWAGSGANATMWEFLNEANNAVPAXXXXXXXXXXXXXXXXXSGNSHRGAASLWSALATATVDGTRAAWEHEELPTFPGGVLRVRPPAAGRSFHIILHRFFAAMVREACNCEERGSDLRQLCGFVGRYPEVVTDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPSFCKIFRDLDLMTVQFAALSGGASQLVNHVLHRFQCFFFWILDECDATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTLDPDQQLALGEECLMLLILLVTEMPMVPDPLTPEPGVDSGDGGGTGVGGRGGGSPEAARKGTAGGG---RMARQLRRELVHRLASAPCTHSELQDTCYASSHNEALEAEMMEAILRDVATRREPSNALDSGRFVLKPEVFAAEYDSTFFHQSIQAHQQASERRPAIKGPTPVAPPPPEAHPLFKQLRVDLVKDETMLRVVGQVLLDCSRKTPGRSRDTLLLRGLHLLTLAVHVMDPSTASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXQGS-----DLEAFCSAMVQPMVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIADVPAPR----TRTLWGELDSVYTH------------SPPXXXXSLW-------ARHRGEAPPPLSVLQLLVELDAAPWDQSDKFLSSSVKWLLERLAGMSERCREIITPTPSPAAC----------PSPGGIGGKSGGAVEKXXXXXXXXXXXXXXXNATAVMEERRKAARKRAMDMIEQKASAFARQIDMMXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXTCASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQRPECIVCRDDADRGPLGFVGFGRRSQVLDVRPDGEERSPGVHLQFCGHALHYSCFEKYYVTMVQISDSNNNVALDVDQGEFHCPFCKAVGNLMVPCFEESSEAEDSDWXXXXXXXXXXXXXXXXXVGV----------------------------GGKERLGKGAAVGHAGGDPMDVSEEEDQ---SSG-------------ASGDGDDDVG---------WLDRKAALSLETARPSMFAARQSXXXXXXXXXXXXXXXXXXXXDRTGSGFVYMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLFDSATRKFLESVYEVETGVTPVLPSVTPEALFLSACRALAYSVSSAATTASPIDSLRGYAAAXXXXXXXXXEGXXAA------AIDHGGATRLRCLRLVAGVLRRAAGQAGLEETVRRKLAGSLAGTSAAGRDGLSGTGAGAADATATGTTPGDTSSEGXXXXXXXXXXXXXXVDPSPADMAAAIAEVSARRMQQKNLLAGLASFAXXXXXXXXXXXXEELGLDRPLLLAGAMETLGAALVVLPAGDTQGAMQCVGALCLVRVLQVLAAFWFQDQHNGGRDAVAEALFLD 2195
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE) HSP 1 Score: 1301 bits (3368), Expect = 0.000e+0 Identity = 890/1558 (57.12%), Postives = 1015/1558 (65.15%), Query Frame = 3
Query: 285 MPGSYPSGNAGEEPP-TIDLTFLALRDACQ-----SDDGPSQQHL------PALAS-----DTPLFTSILRAVLLQQ--GDKERENKLEDLAHATPGVFPVLTRLLAADE----ALAGCSSSSSAA------------------RVDVSNPSSSAPXXXXXXXXXXXDSLPPAASTAGSHEVDHRPTRSMAPFKIASISTLADVQQKLLPANTPRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQELPRGLITAGSKVIGAVQTFLLDAADAVVRSFDLAEPWRLDDGRLPKTLSVIIHQSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSAGDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISLDGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLDVPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRRQSVAGGAPGNQD---GKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLKACFTEWTKILVMVQHMAPQVRQQRMHVEREERDWMFAFNINISLTSLFECMLGWLREPMGNASIPAGFFSSKTPPPPSPAQPRPPHSDSKDKCSRRIADSGDVESSAP------TVVPLPAGMVR----------------------------------QPSMPSPXXXXXKQHMVEVGGDGIEDEVFGDGVAAAAGSEXXXXXXXXXXXXXEGGEGAPLH----------------------------------------------------WAGPGANAAMSSFL--ASHTVGEAAAPXXXXXXXXXXXGG--------------TRDVGGGRGSAAWEHQALPMYPRDVLRVRPPSAGRSFHIILHRFFSAMIRESANCEERESDLRALANLVASHPEVATDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLVAVQFAGLSCGAPQLVNHVLHKFQCFY-WIFDEYNFQTPRRGGEQGXXXXXXXXXXXXXXXXXXXXXXXXXAGTRPVPPINIFSDPSAAHGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DTNQQLALGEECLLLLILLVTEMPVVPDPLHRKQSNGAGCTGIEEQKCRGGVDSSSEVAGEAEGGMNSRLARQLRRELVHRLASAPCTHSELQDTCYATSHNETLEAELMEAVLRDVATRREPTNALEPGKFVLRPAVFAAEYDCTFFHQSIQAHQQASERRPPIKRPTPVAPPPPEAHPLFKQLRVDLLKSETMIRGVGQVLLGCARKYPGRWRDTLLLRGLHLLTLAVHVLRPSPTSTXXXXXXXXXXXXXXXXXXXXESGLAGDRDGASGSDGDVEAFCVAITEPIVR 4469
MP P N G+ ++DLTFLALRDA + S GPS PA S +TPLF SILRAVLLQQ G+ E + + L H TPGVFPVLTRLLAADE ALA + ++ A +++ ++ S S+P +V H + SIS+L+DVQQKLLPA+TPRRVCQYAFLKNDIVWICK+CQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWD RGFC HHGLDN DP+QELP+GLITAGS V+ AVQTFLL+ + AV++SFDL +PW GR PK++S+I+HQS++ ENQ+ +AL SVAN+G+A +HQIRY+L +G AEEAE++ FP P F A G XXXXXXXXXX D S GGEG + D E+ R D RE+ERL+ +AR L +RGLLISVRT ++ RLKR+ DVVRWLHAVS LSDGCCRLVC+MLDVPTLV LMEAD HL K LA A+H+LYLALMADQPFKTRIAAAY +ALP VTANYARG+GTAE+ALYTLSVQFLNRSAFVKELVEKHHLLQIL+GCL+STL+ AC+RQ GGAPGN+ GK+VL ASHSVL HRRYNPI ADLKCVLNIEGVPQRFL+ACFTEW K+L+MVQ MAPQVRQQR+HVERE+R+WMFAFNINISLTSLFECMLGWLREP+ + SIPAGFFSSK T P P + + P + SP V G + + AA +G+ XXXXXXXXXXX GG +P W+G GANA M FL A++ XXXXXXXXXXX G T V G R AAWEH+ LP +P VLRVRPP+AGRSFHIILHRFF+AM+RE+ NCEER SDLR L V +PEV TDVADTAL+VLSFAAEVRAGLWRKNGQ MNDQVLNYAEP+FCKIFRDLDL AVQFA LSCGA QLVNHVLH+FQCF+ W+ +E + T + G XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX D +QQLALGEECL+LLILLVTEMP+VPDPL + +G +E G A GG R+ARQLRRELVHRLASAPCTHSELQDTCYA+S NETLEAE+MEA+LRDVATRREP+NAL+ G+FVL+P VFAAEYD TFFHQS+QAHQQASERRP IK PTPVAPPPPEAHPLFKQLRVDL+K ETM+R VGQVLL C+RK PGR RDTLLLRGLHLLTLAVHV+ PS S+ XXXXXXXXX GSD +EAFC AI +P+V+
Sbjct: 3 MPADEPDDNPGDTSSVSVDLTFLALRDASRQGGNSSSSGPSATATATTVPQPASTSCYRPSETPLFGSILRAVLLQQQAGEGGGEQQ-QSLVHMTPGVFPVLTRLLAADEVCQPALAVAADRAATAEGAGRQQRQPGDHQLRLQQLESAHQSRSSPTPKDPLVASSRAQQDDIQXXXXXXDVSHS-------NNLISISSLSDVQQKLLPADTPRRVCQYAFLKNDIVWICKDCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDYRGFCPHHGLDNGDPLQELPQGLITAGSAVMAAVQTFLLETSKAVMQSFDLTKPWNTSGGRPPKSVSMIVHQSLYEENQVFEALGSVANLGMANVHQIRYILATGSAEEAEIMSFPSFP----FGAAAAGTXXXXXXXXXXXXXXVVAPTGDDGAAASVAGDTAVVS-GGEGDGAADPERER-DARELERLLDVARALVKRGLLISVRTHELQERLKRSQDVVRWLHAVSTLSDGCCRLVCEMLDVPTLVALMEADTHLPKPLACALHELYLALMADQPFKTRIAAAYVRALPAVTANYARGVGTAEHALYTLSVQFLNRSAFVKELVEKHHLLQILAGCLLSTLSRACKRQPARGGAPGNRGFIAGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFECMLGWLREPLKDTSIPAGFFSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPAPLALFQVTFGALVASYEASRERXXXXXXXXXXXXXXXXXXSPQLTSPAAAAAAVEEVASGWESVG--------AAGSGAVEAXXXXXXXXXXXXGGRPSPDQLASPXXXXXXXGREVVSWWADIMEXXXIXXXXXXXXSEGEEKDGAEEEPWQPWSGSGANATMWEFLNEANNAXXXXXXXXXXXXXXXXXXSGNSHRGAASLWSALATATVDGRR--AAWEHEELPTFPGGVLRVRPPAAGRSFHIILHRFFAAMVREACNCEERGSDLRQLCGFVGGYPEVVTDVADTALDVLSFAAEVRAGLWRKNGQSMNDQVLNYAEPSFCKIFRDLDLTAVQFAALSCGASQLVNHVLHRFQCFFFWMLNECDATTTAQTSAAGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTLDPDQQLALGEECLMLLILLVTEMPMVPDPLTPEPGVDSGDGXXXXXXXXXXXXPEAEGKGMAGGG---RMARQLRRELVHRLASAPCTHSELQDTCYASSPNETLEAEMMEAILRDVATRREPSNALDSGRFVLKPEVFAAEYDSTFFHQSLQAHQQASERRPAIKGPTPVAPPPPEAHPLFKQLRVDLVKDETMLRVVGQVLLDCSRKTPGRSRDTLLLRGLHLLTLAVHVMDPSTASSGGPSGAGRDAAXXXXXXXXXXXXXXXXH----GSD--LEAFCSAILQPMVQ 1527
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA) HSP 1 Score: 478 bits (1231), Expect = 4.490e-132 Identity = 717/2776 (25.83%), Postives = 992/2776 (35.73%), Query Frame = 3
Query: 792 ANTPRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQELPRGLITAGSKVIGAVQTFLLDAADAVVRSFDL------------AEPWRLDDGRLPKTLSVIIHQSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSAGDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISLDGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLDVPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLA--------------------------------------PACRRQSVAGGAPGNQDGKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLKACFTEW-TKILVMVQHMAPQVRQQRMHVEREERDWMFAFNINISLTSLFECMLGWLRE-PMGNASIPA----GFFSSKTPPPPSPAQPRPPHSDSKDKCSRRIADSGDVESSAPTVVPLPAGMVRQPSMPSPXXXXXKQHMVEVGGDGIEDEVFGDGVAAAAGSEXXXXXXXXXXXXXEGGEGAPLHWAGPGANA-----------------AMSSFLASHTVGEAAAPXXXXXXXXXXXGGTRDVGGGRGSAAWEHQALPMYPRDVLRVRPPSAGRSFHIILHRFFSAMIRE--------SANCEERESDLRALANLVASHPEVATDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLVAVQFAGLSCGA-PQLVNHVLHKFQCFYWIFDEYNFQTPRRGGEQGXXXXXXXXXXXXXXXXXXXXXXXXXAGTRPVPPINIFSDPSAAHGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTNQQLALGEECLLLLILLVTEMPVVPDPLHRKQSNGAGCTGIEEQKCRGGVDSSSEVAGEAEGGMNSRLARQLRRELVHRLASAPCTHSELQDTCYATSH-NETLEAELMEAVLRDVATRREPTNALEPGKFVLRPAVFAAEYDCTFFHQSIQAHQQASERRPPIKRPTPVAP-----PPPEAHPLFKQLRVDLLKSETMIRGVGQVLL------------------------------GCARKYPGRW----------RDTLLLRGLHLLTLAVHVLRPSPTSTXXXXXXXXXXXXXXXXXXXXESGLAGDRDGASGSDGDVEAFCVAITEPIVRRPLPPTPAAGVPLGDGDAMRASASTPNFWGELDDVFSNLSSSGGALGVAFSHSAESASLGRASMAAAATVASETSAPVSVLQLLLELDAAPWEQNDKLISCGVKWLLARLSGMSERCREIIIPTPGPSYAATTTATLPYTPSRGGTYTGXXXXXXXXXXXXPLFDRGXXXXXXXXXXXXXXXRKRA------MDMIERKASTFAKTMAMLGSSXXXXXXXXXXXXXXXXEGTGIFGGARNNRGRGRRSGRAASGASP--------SAGRDGDTAGPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRETQQECIVCRDNSDGGTLGLVGFGRRSLVQDVRPDAQRRCPGVHLQFCGHAMHYSCFDQYYATVVQISDNHNDVALDVKRGEFHCPLCKAVGNLMVPYF-VPGDEGSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPSSGERGLVEGTRSRGSSPDAMDVSEDEQHPGSSSGGAAATAAGADIPAASGDGDSGRGAVGGNPGGCWLDRKAEVSLEMAPPSAXXXXXXXXXSRAGQSNPLTTRTGSRFGLLAMDRNTDNDDKEXXXXXXNVEGAAEQXXXXXXEHFDLATKRFLESVY-----EVETDLTAVPPSVTPETLFLCACRALAYSVSSAAAATSPLDSLRGHAAXXXXXXXXXXXXXXXXXXXXXXAIDHGDANRLRCLRLVAEALRKAAGQAGLEETVRRKLVESLRGKEKGAPLLPSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGDLNIVHALLKWQRKEEQLEDPDKPLV----LTGAMEMLGTSLVVLPAGDVTG--ARHCVGALCLVRILQVLSVPRFKEQRHKPE-------VLEVESLFLDGDWDSR---RAQRGGESVGAGGGAGGWCQDRNDRYAVVSCS---GRVV-----TSGLEGPAAPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQLPGGRRAAAERVRNSSV--RAD--DYSAYKFEDENVGKLPATRAMTVTPGGESTDDAARVCGXXXXXXXXXXRSSDRYVRLAGAHVTAFLRTALLMVHVCMETPPSPPGGAGSEKAVEGSGGQS------------SPWPAWADGAAAGLPSADDKFLPLCRFFGFPSSAAALLAEPG----------LVDAARRWLACVADPAAFRSTSRSRIGTADWMLLSTRRGVVSGRLFDFPSPLKIELVRLPHAYTELHAQVSTH-------NNSG------SYGGEXXXXXXXXXA---------DRVGHPAVCLVCGEVLDASGGGACTRHARECGCGLGLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNR 8459
A P R+CQ+AF +NDIVWICK+CQ DETCVLCNDCFR S H+GHEVYFY QAGGCCDCGD DAWD GFC HG D DP+ LP I + FL A A+ S+DL A P + G TL + +H + ++ + L + + Q +L E+ E AR +E + AR L R L +S+ T + K A+ +V+WL+ ++ +S G CRLV + L TL RLM A HL K LA A+H LYL LMADQ FK +A +YA VT+ YA GIG AE ALYTLSVQFLNRSAFV +LV H L++L L + P+ S + G GN L+ SH + HRRY+P+VADLK VLNI GV F C W +++L+ +Q++ Q R+ HV E R+WM+AFN+ ISL + +C+L W+R P+G A+ G + P A+ + +++ + + S D S A VV AG+ ++ S K + + G GI EV+ + XXXXXXXXXXXXX + F A+ + E P G AA + P +P+ L + RSFH+ILHR F+ ++RE S+ E DL L ++ P +A + + ++VL +AE+RAGLWR+NGQ M DQV+NY EP FC++FRD+DL+ VQ A L+ G +++N +L +F + W+ P G E G RP SG L LGEECLLLLILL+TE+P+ P P + RL+ LRRE+VHRLAS PCTHSE+ + C+ +S +E + ++E +L VA RRE + LE +FVL + + EYD FFH + QAHQQASE RP K+ + +P PPP AHP+F LR+ LL S T+++ + VL+ G P RD+L+ R LHLLTLAVH LR P+S PA T +F+ + D T A +S+ S+ LLL L ++ +D + G +WLL L + C+ + + A A + G T F +G R+ +D +R+A A+ M G G G G + G P SA D G A XXXXX +C ++ +G G + GR + + Q R G+ +Q CGHA+HY CFD Y+A+VV+ S+ ++ +V+ GE+ CP CKAV +VP+ V D G G+ E +A DV E E W ++ + + R L++ G++ + + T ++ E E A + + D S E+DL P +L C +LAY+++ A +G DH D R+ L AL + G + R L S LPSP G D I L ++ + P+ + G G + V P + G AR +G C + + + S EQ + V+ FL S RAQ G ES + D ++C+ RVV T G+ AP L L G A E S RA+ D SA+ +G+ A+RA+ E+ + + S + AG A L A L V V +T GGA K G+ GQS S WP W L F L R G P A LL E G L + ++R+LA P++ S G + W R D+P V L +YTELH+++ N +G + GG A RV +P +CLVC L+A G G CT HAR CG G+G+FFLLQ+C+VLLI+ RA YFPSPYVD YGER + FRGRPL LD+RR + +R +WAK V +EVVQ R
Sbjct: 246 AMAPHRICQFAFKRNDIVWICKDCQKDETCVLCNDCFRLSQHQGHEVYFYQTQAGGCCDCGDDDAWDKAGFCPRHGQDGNDPLSHLPPSFIAGSRWTMAQSVLFLRQAVAALQESYDLEHVEDAVWAGEAAAPGPGEPGEYYLTLH---NDDMHSKREVVEVLQQCLGLNL----QTARVLTDVVQEQGE---------------------------------------------------------------------ARLHFGSLEEVRPKARRLQARSLSVSLVTRRLHKIEKVAVLLVQWLYTLAGISGGTCRLVVEQLQPSTLNRLMVAHGHLPKPLATALHALYLFLMADQSFKKAVAQSYADTYLTVTSYYAAGIGVAESALYTLSVQFLNRSAFVNDLVGHRHFLEVLVQALADMIQRASGPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLSFSSHSRGISGN------LLVSHPIFRHRRYSPVVADLKFVLNIPGVSAHFANTCMDVWLSRLLIPLQYIHAQEREADEHVTYESREWMYAFNVQISLCHVLDCLLSWVRTAPLGVATAAQTESHGIKDTDMDVPVRLAK----QEEWQERGDKGVGTS-DFGSQASVVV---AGIQILGAIKSWQETFCKAFLSQ--GVGIAREVWEEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERGFSAASSSLEPPTPLLP------------------GPAAEATVSYPCHPKGTLHLLRLPLRRSFHLILHRAFAFLVREAVKNPALLSSTSAPSEGDLGQLLAHISEEPLLALGLFEMPVSVLVLSAEIRAGLWRRNGQLMMDQVINYREPPFCRVFRDMDLLLVQMAALAWGDWEKVMNALLRRFHVWTWL--------PPAGWEDVGKADEAGGQGGDRKATDSSSWMRPEGGQRP---------------RSGRPWNRRDRWDDDVVRETL---------------LPLGEECLLLLILLITEVPLPPMPPQDRH----------------------------------RLS--LRREIVHRLASGPCTHSEVHECCHHSSDGSEVIPESMIEEILASVAVRREARD-LEAERFVLSESAWE-EYDPAFFHMTNQAHQQASEMRPSPKKESGPSPKACVRPPPPAHPVFAPLRLGLLSSRTLLQVIRTVLMKAFPPSGRSSSGVPASTSFLSEPTEPTDSTGFIAPLPSPXXXXXXXSACIRDSLIPRCLHLLTLAVHALRDCPSS----------------------------------------------------------PA----------------TRSFFAAMHD----------------------------------TSALPSSSSPSLFSLLLALPSSIASSSDVHLLQGTQWLLQNLGRLDPVCQAALDRSVAVGEGAQKIARS----AHGRKKTAREKMLAKMQRSAAEFLKGQEGKEEEEEDVPRRVRENKEGDDGMVDEDDRRAGKSAEGRIMPSPRKKSLGEL----------GPGETNGEEGMEGEEKAGGEEVLPKKPVCMACRGSSAKEDSSPLGYAAFVQRSNVLSRSLPLGELDACPTSSSPQKPGRXXXXX----------ADGKCG--QEEEEGEXEGTIEGGRSAARSGKQAGFQERREGLIVQLCGHALHYGCFDAYFASVVESSEAMGNLIYNVQAGEYPCPYCKAVSTCLVPHIPVVEDAGLFGGVVIGAGAGVIDRQGARKGKDGNRGTVVWRFEDHLQALVEADDEDMDEQMQGKTTEEEEKECL----EAWDVHEQEG---------------------------------------WEEKDSTILRTSQ-----------GAERTHVPGSLSSFEGAQAAMAMEGKETGEEESEEDQEAARNEAALTESCRLFLKSMDSGGSPSSPSSRWRGERGWESDL--------PVDRYLKVCESLAYTLAVAQVEMGHGGEEKGRKGWHADGGRGDIGGTSGTCSGG----DHADVARVTRLN----ALIRVLGY------MTRPLWPSFLDP------LPSPVTDSQAAGSSGSTNENQGVQEGDDEGDAVGMLTSMGRGYGEDAPIKPLLSAQHLRKRRRGGPEAQERGLGGIGGRKRRQGRAEGVAPRVRMAGPLARLLLGGGCPLNVGRGSSSLLRTEQPLLSQNVWCVWVAAAVDLTFLAPSVSSAQGGRAQTGKESSRG--------KTEEDVLRDLTCAIFVARVVQVLWDTGGVFR-LAPG-GGGKGKEEAMEIPGGPRLGANGDREDLEEGASREETLLLEGVSAAMGEAKEGPSPVERAEMLDMSAWGMR---LGRSMASRAVATLSVEEAQERVS----------PGQLASRFEMAKQAGK---ALLECAALFVRV--KTAQGGDGGAKRGKTA-GTDGQSESDSRSGRGRVASSWPGWH------LTGPGASFTDLRRAMGVPEFAD-LLREEGQMWTCLAITWLSEWSQRFLA--RPPSSPPSYLVRPAGPSSWDR--------DRRSLDYPVWAPPRFVPLRASYTELHSELIARLLSAFDQNEAGDSAFPMASGGVAGTGAITPVAAXXXXXXXXPRVENPVLCLVCNAALEA-GRGRCTAHARACGRGVGVFFLLQDCSVLLIYLDRACYFPSPYVDVYGERHKQ-FRGRPLHLDERRLEALRRVWAKQRVPYEVVQAR 2571
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A6H5JZR4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR4_9PHAE) HSP 1 Score: 368 bits (945), Expect = 4.030e-111 Identity = 215/328 (65.55%), Postives = 232/328 (70.73%), Query Frame = 3
Query: 7596 DRYVRLAGAHVTAFLRTALLMVHVCMETPPSPP-----------GGAGSEKAVEGSGGQSSPWPAWADGAAAGLPSADDKFLPLCRFFGFPSSAAALLAEPGLVDAARRWLACVAD------PAAFRSTSRSRIG-TADWMLLSTRRGVVSGRLFDFPSPLKIELVRLPHAYTELHAQVSTHNNSGSYGGEXXXXXXXXXADR----------VGHPAVCLVCGEVLDASGGGACTRHARECGCGLGLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 8495
DRYVR+AG HVT FLRTALLMVH+CM+ P S G G E+ V +G G LPSADD F PLCRFFGFP+SA ALLAEPGL+DAARRWLACV+ P A + +G T +LL RR V RLFDFPSP+KI+LVRLPHAYTELHAQVS+ XXXXXXXXX GHPAVCLVCGEVLDASG G CTRHA ECGCG GLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRH+FRGRPL+LDQRRYDVVRGLW KHLVAHEVVQNRSTSRQVII +HY
Sbjct: 26 DRYVRVAGPHVTVFLRTALLMVHICMQPPSSSSLDPEEASGTAGGSDGLEEKVANNG----------SGRLGLLPSADDAFSPLCRFFGFPTSAEALLAEPGLLDAARRWLACVSGSETVLGPGALPADGGPVVGNTVGSLLLRLRRENVCRRLFDFPSPVKIDLVRLPHAYTELHAQVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHPAVCLVCGEVLDASGRGECTRHAAECGCGTGLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 343
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A6H5JVD3_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD3_9PHAE) HSP 1 Score: 301 bits (772), Expect = 7.520e-84 Identity = 293/572 (51.22%), Postives = 333/572 (58.22%), Query Frame = 3
Query: 5394 RETQQECIVCRDNSDGGTLGLVGFGRRSLVQDVRPDAQRRCPGVHLQFCGHAMHYSCFDQYYATVVQISDNHNDVALDVKRGEFHCPLCKAVGNLMVPYFVPGDEGSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPSSGERGLVEGTRSRGSSPDAMDVSEDEQHPGSSSGGAAATAAGADIPAASGDGDSGRGAVGGNPGGCWLDRKAEVSLEMAPPS------AXXXXXXXXXSRAGQSNPLTTRTGSRFGLLAMDRNTDNDDKEXXXXXXNVEGAAEQXXXXXXEH------FDLATKRFLESVYEVETDLTAVPPSVTPETLFLCACRALAYSVSSAAAATSPLDSLRGHAAXXXXXXXXXXXXXXXXXXXXXXAIDHGDANRLRCLRLVAEALRKAAGQAGLEETVRRKLVESLRGKEK----GAPLLPSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGD-----------------LNIVHALL--KWQRKEEQLEDPDKPLVLTGAMEMLGTSLVVLPAGDVTGARHCVG 7004
+E + ECIVCRD++D G LG VGFGRRS V DVRPD + R PGVHLQFCGH +HYSCF++YY T+VQ+SD++N+VALDV +GEFHCP CKAVGNLMVP E +S XXXXXXXXXXXXXXXXXXXX G+ +G + + D MDVSE E+H S +GG DGD G WLDRKA +SL A PS +XXXXXXXXX RTGS F + M N D+ XXXXXX XXXXXXE FD AT++FLESVYEVET +T V PSVTPE LFL ACRALAYSVSSAA SP+DSLRG+A AIDHGDA RLRCLRLVA LR+AAGQAGLEETVRRKL SL G G + AXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G D L + A + + Q+K+ E D+PL+L GAME LG +LVVLPAGD GA CVG
Sbjct: 154 KEQRPECIVCRDDADRGPLGYVGFGRRSQVLDVRPDGEERSPGVHLQFCGHTLHYSCFEKYYVTMVQMSDSNNNVALDVDKGEFHCPFCKAVGNLMVPCLEESSETEDSDWXXXXXXXXXXXXXXXXXXXXVGL-------------------------GGKERPGKGATADHAGGDPMDVSE-EEHQSSDAGG---------------DGDDDVG---------WLDRKAALSLMTARPSMFAARQSXXXXXXXXXXXXXXXXXAMDRTGSGFVYMVMAGNADSXXXXXXXXXXXXXXXXXXXXXXXXELSAQQQLFDSATRKFLESVYEVETGVTPVLPSVTPEALFLSACRALAYSVSSAATTASPIDSLRGYATAVAAAAAGSGTRGAAAT-----AIDHGDATRLRCLRLVAGVLRRAAGQAGLEETVRRKLAGSLAGTSAADRDGLSGTGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAGAAVGGVDPCPADMAAAIAEVSDTELTALRAEVARRMQQKKLLAEQLDRPLLLAGAMETLGAALVVLPAGDTQGAMQCVG 670
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A1Z5JBN3_FISSO (E3 ubiquitin-protein ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBN3_FISSO) HSP 1 Score: 264 bits (674), Expect = 1.320e-66 Identity = 204/556 (36.69%), Postives = 271/556 (48.74%), Query Frame = 3
Query: 801 PRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHG----LDNRDPIQELPRGLITAGSKVIGAVQTFL-LDAADAVVRSFDLA----------EPWRLDDGRLPKTLSVIIHQSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSA-----GDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLIS------LDGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCD-MLDVPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRRQSVAGGAPGNQDGKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQ-------RFLKACFTEWTKILVMVQHMAPQVRQQ--RMHVEREERDWMFAFNINISLTSLFECMLGW 2360
PRRVCQ+ F KNDIVW+C+ CQADETCVLC+ CF SDH GH+V FYHAQAGGCCDCGDPDAWD GFC HG + DP LP L+ V+ AV +L L A+ +++ E +DD + + + D L+ AN VA H I L +G+ L + S A G D G+ V SD GL S +DG+K A R E ++ A L G+ S+ T ++A+ +++WL V+ D C V + +L LV L+ +D +S + +A + L L L+A FK+ +AAAY VT+ YARG+G E + YTLSVQFLNR +V +LV+ LL L L+ T+ A + Q G N H VLAHRRY+P V+DLKCVLN+ G+P+ FLK +W L + Q M PQ + + HVE E R W+ AFN +ISL SLFE +LGW
Sbjct: 144 PRRVCQHPFRKNDIVWVCRTCQADETCVLCHTCFSQSDHAGHDVNFYHAQAGGCCDCGDPDAWDPAGFCPFHGPNAACSSSDP-GALPPSLVNRVRGVVPAVVDWLVLTIAENAEKAYARVNSGLPLDTDMEIMDVDDMMVSPRSHIFSPTAASTNRSQRDELSLSANNEVA--HSIGQLGSTGRGLFLVLHADDIHVKSQVVEALRHFWGTSMFISDMLLNRMVDALKQYGQLV-----------IWGTSDVCAGLTSAQAHLWMDGDKV-ACTRVGEIMLERAYRLLRHGMFCSIVTYDELLLEQQAVGILQWLSIVARSCDPLCVEVAECILPNRHLVPLLRSDFKMSSRVTKAWYALLLTLLAVPTFKSHLAAAYCDTYADVTSKYARGMGVLERSGYTLSVQFLNRVTYVIDLVQSRDLLGKLGESLLETMKVATKSQQYNGRLDPN----------HFVLAHRRYSPCVSDLKCVLNVAGMPRVACCAKTTFLK----DWVATLAIAQFMDPQSWRNWNQGHVEDESRGWVGAFNASISLGSLFERLLGW 670
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: B7GBX5_PHATC (E3 ubiquitin-protein ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBX5_PHATC) HSP 1 Score: 248 bits (633), Expect = 3.510e-64 Identity = 202/604 (33.44%), Postives = 281/604 (46.52%), Query Frame = 3
Query: 801 PRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQ-ELPRGLITAGSKVIGAVQTFLLDAADAVVRS----FDLAEPWRL---DDGRLPKTLSVIIHQSIH-------------------------------PENQLSDALASVAN----IGVAKIHQIRYLL------ESGKAEEAELLRFPVSPSSVAFSAGDGGA------------------------GGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISL--DGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCD-MLDVPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRRQSVAGGAPGNQDGKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLKACFT---EWTKILVMVQHMAPQVRQQRM--HVEREERDWMFAFNINISLTSLFECMLGWLRE 2369
PR+VCQ+ F KNDIVW+C+ CQADETCVLC++CF S+HEGH+V FYHAQAGGCCDCGDPDAWD GFC HHG + + LP G V+ AV +++ AV + P R D LP +L + +S E+ LSD SV + G + + ++ +SG A ++ L R ++ GG G N + + ++ G + L DG+K A R L+ A L+ G S+ T ++A+ V++WL ++ C V +L LV L+EAD +S + +A + L L L+A FK+ +AAAY VTA YARG+G E + Y LSVQFLNR +V +LV+ LL L L+ TL A R P N +G+L +H VLAHRRY+P ++DLKCVLN++G+P+ F T +W ++L + Q M PQ + HVE E R W+ AFN +ISL S+FE +L W E
Sbjct: 144 PRKVCQHPFRKNDIVWVCRTCQADETCVLCHNCFSQSNHEGHDVAFYHAQAGGCCDCGDPDAWDPDGFCPHHGPNAVNASDARLPEGFTHRVQGVVPAVVDWMVRDVAAVGETGYARCHAPTPLRRASSDHEDLPPSLPSLAQRSASMPLEQELQSVGMDIDEELFAETAENDETAADDEDLLSDRFHSVVDSLRMYGPSNFNHRTHVFSPTAASKSGAAADS-LRRHEARAEALGRKGATGGGLFLVLHHDDVHTSQSWLDALREFLGSTNYYTDTLLGKLI--KALKTYGQLIVWGTMEVATEVGWTQVQLWMDGDKV-ASTRIGALLLEHASRLTRHGAFCSILTREELWLEQKAVGVLQWLSKLAESCHPFCNTVAACILPNRHLVPLLEADFKMSARVMKAWYSLLLTLLAVPTFKSHLAAAYCDTYRSVTAKYARGMGVLERSGYQLSVQFLNRVQYVVDLVQGRDLLGKLGKTLLDTLLVARR--------PRNLNGRLN--PNHHVLAHRRYSPCISDLKCVLNVKGMPRLFAAKGGTFLGDWIEVLSIAQFMDPQSWRHWTFGHVEDESRGWVGAFNASISLGSIFERLLSWEDE 733
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A7S1FYU0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYU0_9STRA) HSP 1 Score: 254 bits (650), Expect = 7.040e-64 Identity = 276/1021 (27.03%), Postives = 400/1021 (39.18%), Query Frame = 3
Query: 1587 SERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLDVPT-LVRLMEADAHLSK-ALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLA----PACRRQSVAGGAPGNQD----------------------------------GKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLKACFTEWTKILVMVQHMAPQ--VRQQRMHVEREERDWMFAFNINISLTSLFECMLGWLREPMGNASIPAGFFSSKTPPPPSPAQPRPPHSDSKDKCSRRI-----ADSGDVESS-APTVVPLPAGMVRQPSMPSPXXXXXKQHMVEVGGDGIEDEVFGDGVAAAAGSEXXXXXXXXXXXXXEGGEGAPLHWAGPGANAAMSSFLASHTVGEAAAPXXXXXXXXXXXGGTRDVGGGRGSAAWEHQALPMYPRDVLRVRPPSAGRSFHIILHRFFSAMIRESANCEE--------RESDLRA----------LANLVASHPEVATDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLVAVQFAGLS-----CGAPQLVNHVLHKFQCFYWI---------FDEY----------------NFQTPRRGGEQGXXXXXXXXXXXXXXXXXXXXXXXXXAGTRPVPPINIFSDPSAAHGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTNQQLALGEECLLLLILLVTEMPVVPDPLHRKQSNGAGCTGIEEQKCRGGVDSSSEVAGEAEGGMNSRLARQLRRELVHRLASAPCTHSELQDTCYATSHNETLEAE------------LMEAVLRDVATRREPTNALEPGKFVLRPAVFAAEYDCTFFHQSIQAHQQASERRPPIKRPTPV---APPPPEAHPLFKQLRVDLLKSETMIRGVGQVL-LGCARKY-----------PGRWRDTLLLRGLHLLTL 4280
+ R L IS++T ++ ++ W+ A+S+ D C C +D LV L+ +D + + +A H L L L+A FK+ +A AY + +VT YARG+G +EY+ YTLSVQFLNR +VK+LV K LL LS + P ++++VA G + H V+ +RRY+P+++DLKCVLN+ G+ + + C W +L Q M PQ + + +HV E + W+FAFN ISL+SLFE +L W + P+ F D+ + R A V+ +P + P P +R P PS K+ A P +S+ A H GT A+P P SA SFH++LH FF A +RE E+ R + A LA+L S P V + + + LS AA++RAGLW++NG CM DQ +NYAEP FCK+FRD DL VQFA L A L+N +LH+F F WI EY + ++ XXXXX + +P I + S S A DT++ L EE L L+I+ +TE+PV P H + +LRRE++HRL S PCTHSEL + + S +E + + +E++L+ VA RR P+ LEP +F L P ++ EYD F+H + ++HQ AS+ RP K P AP PP AHP F +LR D+ + + V + + + CA+ W +T L R +HLLTL
Sbjct: 40 NSRRLPISIKTHRQLLEERKCSALLGWVSALSSSCDALCGQTCGAIDKNAHLVPLLRSDLRMGRDGIAGRWHGLLLTLLATPAFKSALAEAYTETYGQVTDEYARGVGISEYSSYTLSVQFLNRQTYVKDLVRKGSLLHTLSASXXXXXSIAAVPVPQKETVANSDDGGNEHPAEQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVMTNRRYSPVISDLKCVLNVVGIARVYSSKCLDPWLAVLRRAQEMDPQKWIGLKGIHVIEEPKGWIFAFNAGISLSSLFEKILAWEDNDDSSPIDPSQLFRM-------------------DEVTWRTLLGVHAWFRSVQHRYSPVLRPPPRRKIRFP--PSTRAAEAKR-------------------------------------------------AEPSRTLPLSTVAADH--------------------GTL-------------VAMPALPLGQ------SAAFSFHLLLHHFFVACLRELLRREDAVIPQLLARIAGTTADGPENWGGGELAHLCRSIPTVFIGLMEFPVLALSRAAQIRAGLWKRNGHCMYDQCMNYAEPPFCKMFRDADLFLVQFAALGYSHGESSAAYLINLLLHRFGIFSWIGLTCAPDVYTQEYLNGIESNLFPSVDHDNTVNNEKSNSDKNDDADGKXXXXXGDENTHCETWVPDDDVCKDMPGIQLPSSHSPAR--------------------------------DTHEHTRLLEEFLHLVIIFITELPVPSHPSH--------------------------------------ITARLRREVLHRLTSGPCTHSELAEVHHVLSQSENVTLQRNTSPPTLNGGGTLESILKVVAERR-PSKGLEPDRFQLLPHLWE-EYDPAFWHVTTRSHQVASDARP--KYPGKARSWAPQPPVAHPSFCRLRKDVTADASWLAVVFRTVHVHCAQDLGESFFRSDAYSKDAWSETALARAVHLLTL 877
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A7S1ZF23_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF23_9STRA) HSP 1 Score: 250 bits (639), Expect = 1.570e-62 Identity = 319/1271 (25.10%), Postives = 496/1271 (39.02%), Query Frame = 3
Query: 786 LPANTPRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQELPRGLITAGSK-VIGAVQTFLL--------DAADAVVRSFDLAEPWRL--DDGRLPKTLSVIIH-QSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSAGDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISLDGEKARADMREM-ERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLD--VPTLVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRR-------------QSVAGGAPGNQDG-KLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQ------RFLKAC-----------FTEWTKILVMVQHMAPQVRQQ--RMHVEREERDWMFAFNINISLTSLFECMLGWLREPMGNASIPAGFFSSKTPPPPSPAQPRPPHSDSKDKCSRRIADSGDVESSAPTVVPLPAGMVRQPSMPSPXXXXXKQHMVEVGGDGIEDEVFGDGVAAAAGSEXXXXXXXXXXXXXEGGEGAPLHWAGPGANAAMSSFLASHTVGEAAAPXXXXXXXXXXXGGTRDVGGGRGSAAWEHQALPMYPRDVLRVRPPSAGRSFHIILHRFFSAMIRESANCE------ERESDLR-----------ALANLVASH-----PEVATDVADTALNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLVAVQFAGLS-----------------CGAPQLVNHVLHKFQCFYWI-FDEY-NFQTPRRGGE--QGXXXXXXXXXXXXXXXXXXXXXXXXXAGTRPVPPINIFSDPSAAHGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTNQQLALGEECLLLLILLVTEMPVVPDPLHRKQSNGAGCTGIEEQKCRGGVDSSSEVAGEAEGGMNSRLARQLRRELVHRLASAPCTHSELQDTCYATSH--NETLEAE------------LMEAVLRDVATRREPTNALEPGKFVLRPAVFAAEYDCTFFHQSIQAHQQASERRP--------------------------PIKRPTPVAPPPPEAHPLFKQLRVDLLKSETMIRGVGQVL 4205
L A PRRVCQ AF KNDIVW C+ CQ D TCVLCNDC+ SSDH+GH+V FY AQ+GGCCDCGD DAWD +GFC HG D E+ G++ V A+ +++ A V ++ +P R + GR L +++H + S AL + ++ ++ +E + F ++ + + S GD G N + G L E R++ E ++ +R L+ RGL+ S++T R R + WL+AV+ D V + +P ++R + L + +A A + L L L+A FK +A AY A V + YARGIG+ ++ Y LSVQFLNR+++VKEL + L++ + G + L A + +S+ G G+ + ++ H+VL RY+PI++DL+ +L++ G+ + + C W K L + Q+M QV + + HVE E + WM A+ +++SL +FE +L W + +I + SK++C +++ TV + G+ W + M+S+ + + + P T V G A +ALP V +VRP SFHI LHRF + +RE A E+ D+ L +L++S + + + VLS A++R+GLW++NG CM++QV Y E +C+ +D DL+ +QFA ++ G + N +LH+F F + FD+ N T R E QG + S+ S A + + LAL E+ L L I+L+TE+P P P +R SE A +A+ +LRRE++H+L S P HSEL + S N L E +E L +VA R+ ++ LR ++ EYD +F+H S++AHQ A+E+RP P P AP PP +H F ++R D T+I V + L
Sbjct: 185 LGAPIPRRVCQKAFRKNDIVWACRTCQTDRTCVLCNDCYTSSDHDGHDVVFYRAQSGGCCDCGDADAWDPKGFCPRHGAGATDEAIEMLGNSKAEGTRGVAEAIMDWIVRELLGGVESALHRVSGQENIIDPARHLGNIGRQQSGLYLVLHADDVSWSEDRSTALRELYTYSQVDPNRPSFVPPRNVFPHSEEVIFQIA-TLLFRSHGDLIMWGTNELIR----------------------------EAGHETAKLWKEGEEVATRQIGELMLHRSRLLNHRGLVCSIKTHSELLREGRVAAALEWLNAVAQSCDPLSLQVGSAVSGRLPPMLR---CNLFLPRRIASAWNSLLLTLVAAPSFKGALAGAYVDAYSDVASEYARGIGSHHWSSYALSVQFLNRASYVKELAREKRLMETVVGAFLDMLRLAAKEIHSDSSSSDWSKTESLNDGKTGHSPRIQYIVNPLHTVLTQYRYHPILSDLRLILDVPGIARLVSLVPNATENCDGNKPLGHLSFLDSWIKTLSLCQNMDGQVWRSWGQTHVENEHQSWMGAYMLSVSLGDIFERLLAWEDDDPCPINI---------------------KNKSKEECLLSVSEL--------TVYIMSTGLDT--------------------------------------------------------------WQ----TSEMNSYKPTANIFDIPQPRRCPSSLPYS---TVAVDYGSDLAM---EALP-----VAQVRP----FSFHIPLHRFVAVCLREVARRPNARVGTEKNKDVTNQVGKEDGIHLVLTSLLSSFGSQRLKRFLRGLVEFPVIVLSRVAQIRSGLWKRNGYCMSEQVGRYDEQEYCRSMKDADLMLLQFAIIAHQALHSFGSVDDTYVNDAGCAYITNLLLHRFGLFDFAGFDKSPNSDTTRYLEEVKQGLYQG------------------------------EVRSNNSDA----------------------LVLPWTYTPAKEPSSFLALLEQLLQLFIVLITELPS-PYPRNR-----------------------SEEAIQAK--------MRLRREVIHKLVSGPKLHSELTEVYLVLSKRDNNILSEEGKLANPDDAMGAALEEALSEVADRKASRGKGGAQQWELRRHAWS-EYDPSFYHMSLKAHQIAAEKRPYFTDFGNPSATTAQDASTSIILPGYTSTPPPEPYAPHPPPSHLSFSRIRRDFTSDATVISLVYRTL 1228
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Match: A0A1E7FD43_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD43_9STRA) HSP 1 Score: 236 bits (601), Expect = 6.670e-61 Identity = 186/590 (31.53%), Postives = 266/590 (45.08%), Query Frame = 3
Query: 786 LPANTPRRVCQYAFLKNDIVWICKNCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDSRGFCNHHGLDNRDPIQELPRGLITAGSKVIGAVQTFLLDAADAVVR--------SFDLAEPW---------------RLDDG--RLPKTLSVI-----------------------------IHQSIHPENQLSDALASVANIGVAKIHQIRYLLESGKAEEAELLRFPVSPSSVAFSA-----GDGGAGGDNXXXXXXXXXXXXGEGVDXXXXXXXXXXXXXXSDGGEGLISLDGEKARADMREMERLVGIARGLSERGLLISVRTDGVEARLKRALDVVRWLHAVSALSDGCCRLVCDMLDVPT-LVRLMEADAHLSKALARAVHDLYLALMADQPFKTRIAAAYAQALPKVTANYARGIGTAEYALYTLSVQFLNRSAFVKELVEKHHLLQILSGCLVSTLAPACRRQSVAGGAPGNQDGKLVLVASHSVLAHRRYNPIVADLKCVLNIEGVPQRFLK--ACFT-EWTKILVMVQHMAPQVRQQ--RMHVEREERDWMFAFNINISLTSLFECMLGW 2360
L + PRRVCQ+ F KNDIVW+C+ CQADETCVLC+ C++ SDHEGH+V FYHAQAGGCCDCGDPDAWD GFC+ HG P + VI VQ + A D +V+ F+ E R+++G + + V+ + + I + + ++ K ++ L + G L + A G ++ G+ V + LDG++ + + L GL S+ T + A+ V++WL A++ D C+ V + + L L++AD LS + + H L L L+A FK+ +AAAY VTA YARG+G E + Y LSVQFLNR +V +LV++ LL L L TL +VA NQ +L +H V+ +RRY+P ++DLKCVLN++G+P+ F CF +W L + Q M QV + + HVE E R W+ AFN +ISL SLFE +L W
Sbjct: 63 LSRSVPRRVCQHPFKKNDIVWVCRTCQADETCVLCHACYKGSDHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFCSRHG-----PAASVGSSNRPLSGSVIFRVQGMVPAAVDWMVKYVAMTAIEGFERTEEEQEQLHTQPTETPTQSRVEEGDVEMKDSTDVVTXXXXXXXXXXXXXXXXXXXXKTASGRGSVRRLIFSPSAAGSSRRQQKDLPYTKAEELGMLAKRGGGLYLVLKSDDIHTDRQLVEAFRDLLGTSSLYTESILQKVVQALKQFGQLVVWGTTEILAELSTTQI-----RLWLDGDRIASGVFGSAILNRAKILTRHHGLFCSILTRQELQIEQHAVTVLQWLTALARSCDPLCQKVAESISPDRHLAPLLQADFKLSSRVTKYWHSLLLTLLAVPTFKSHLAAAYCDTYQSVTAEYARGMGVLERSGYALSVQFLNRVTYVVDLVQRRDLLGKLGASLFQTL-------NVAAVPVDNQQRRLN--PNHFVMMNRRYSPCISDLKCVLNVKGMPRLFASKSGCFLKDWIAALGLGQMMDSQVWRDWTQGHVEVEHRGWVGAFNASISLGSLFERLLSW 633 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17111.1 >prot_C-linearis_contig97.17111.1 ID=prot_C-linearis_contig97.17111.1|Name=mRNA_C-linearis_contig97.17111.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2746bp MEWTDATAMPGSYPSGNAGEEPPTIDLTFLALRDACQSDDGPSQQHLPALback to top mRNA from alignment at C-linearis_contig97:537849..562442- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17111.1 ID=mRNA_C-linearis_contig97.17111.1|Name=mRNA_C-linearis_contig97.17111.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=24594bp|location=Sequence derived from alignment at C-linearis_contig97:537849..562442- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:537849..562442- >mRNA_C-linearis_contig97.17111.1 ID=mRNA_C-linearis_contig97.17111.1|Name=mRNA_C-linearis_contig97.17111.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=16476bp|location=Sequence derived from alignment at C-linearis_contig97:537849..562442- (Chordaria linearis ClinC8C monoicous)back to top |