mRNA_C-linearis_contig97.17110.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig97.17110.1
Unique NamemRNA_C-linearis_contig97.17110.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 1.790e-132
Identity = 275/434 (63.36%), Postives = 299/434 (68.89%), Query Frame = 2 
Query:   20 LTSSPEFEIECQPDEYKEVTVGYGTTLIALNHWRTTVGEASTYEWSFQVVRAES-----TFLYYFDYGEFGGDPYTPYLSGGAGSEVIATITAGDAAGNTDTCSFLMVLWPRGTPLPTDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPXXXXXXXXXXXXXXXXTPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVPAASTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQTKEPTLPPIAVSPPTAQPASPPADEDDD-ADFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETGCLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            L ++ +FEIEC PD+YKEV VG GT +I LN W+ TVGEA T  WSF V+ A        +LY F  G+ G D YT  L GGAG+EVIAT+TA DAAGNTD+CSFLM+LWP GTPLPTDE    XXXX                                          PEP   XXXXXXXXXXXXXX             TPVPAASTT               XXXXXXXXXXXXXXXXXXXX           IAVSP TAQP SPP +EDD+ A+FVEAGSKT VGVTA+AYDDRPGESAGD GCGE GCLPDLAHDGV GE D ESRWSCA+EIVPDGGQCEI+FTFDSPQDI DVQVAFWKGDERTRTLK+KINGD +GEYESYPGSTFNSFGIQENGVHTVTMES+ ID ++WISLLEVRFMVDP
Sbjct:   21 LPAAAQFEIECIPDQYKEVAVGSGTIMIRLNTWKATVGEAETAVWSFDVINAVDGSNVIDYLYPFHIGQSGSDLYTISLMGGAGTEVIATVTAFDAAGNTDSCSFLMMLWPEGTPLPTDEPVSTXXXX------------------------------------------PEPVAPXXXXXXXXXXXXXXGWVQ---------TPVPAASTTPEPVVIPPTAGPSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVSPATAQPVSPPEEEDDNNAEFVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGV-GEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMVDP 402
[Close]
BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.910e-66
Identity = 106/120 (88.33%), Postives = 112/120 (93.33%), Query Frame = 2 
Query:  944 GCLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            GCLPDLAHDGV GE D ESRWSCA+EIVPDGGQCEITFTFDSPQDI DVQVAFWKGDERTRTLK+KINGD +GEYESYPGSTFNSFGIQENGVHTV MES+ ID ++WISLLEVRFMVDP
Sbjct:    2 GCLPDLAHDGV-GEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMVDP 120
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.940e-50
Identity = 90/158 (56.96%), Postives = 120/158 (75.95%), Query Frame = 2 
Query:  830 DDDADFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETGCLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            D D + V A + T +  +A+ +D+RPG+++GD GCG+ GCLP LA DG+    D ESRWSCA++IVPDGGQCEI FTF  PQ++  +QV FWKG+ERTRTLK+KING+  GE++S+PGS  + F +    VHTVT+ES+ +D +EWISLLEV FMV+P
Sbjct:  186 DMDHELVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITD--DVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEVIFMVEP 341
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.900e-47
Identity = 91/167 (54.49%), Postives = 113/167 (67.66%), Query Frame = 2 
Query:  824 DEDD----DADFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            DEDD      D VE G+KT+V V+A+A+D RPG S+GD GCGE G   C P    DG+  E  AESRWSCA +IVP GG C+I + F  PQDI D+QVAFWKGDER RTL++  +G     +ESY GSTFN  G+   G+ +V +ES+D+ ENEWISL+EV   V P
Sbjct:   61 DEDDLLNIGTDAVEVGTKTDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGISNE--AESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIFVSP 225
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 9.090e-43
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 2 
Query:  848 VEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            VE G+K  VGV+A+A+D RPG S+GD GCGE G   C      DG+  E   ESRWSCA ++VPD G C+I FTF  PQ IVD+QVAFWKG++RTRTL + +NG+    +ESY  STFN+ G+  N   TV +ES  +  +EWISL+EV   V P
Sbjct:   21 VEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSE--IESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEASTVMLESTALLSDEWISLIEVLIFVTP 173
[Close]
BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 9.160e-42
Identity = 89/161 (55.28%), Postives = 110/161 (68.32%), Query Frame = 2 
Query:  824 DEDD----DADFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEV 1285
            DEDD      D VE G+KT+V V+A+AYD RPG S+GD GCGE G   C P    DG+  E   ESRWSCA +IVP GG C+I + F  PQDI D++VAFW GDER RTL++  +G     +ESY GSTFNS G+   G+ TV +ES+D+ ENEWISL+EV
Sbjct:  467 DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNE--TESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
[Close]
BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.420e-41
Identity = 82/152 (53.95%), Postives = 106/152 (69.74%), Query Frame = 2 
Query:  851 EAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMV 1297
            E G+ T V V+A+A+D RPG S+GD GCGETG   C    AHDG++ E   ESRWSCA  +VPD G C+I F+F  PQDIVD+QVAFW+G+ERTRT+ + I+G+    +ESY  STFN+ G+      TV +ES+D+  +EWISLLEV   V
Sbjct:  158 EVGTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISE--IESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEVLIFV 307
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.720e-40
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 2 
Query:  842 DFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            D VE G+KT V V+A+A+D R G S+G+ GCGE G   C  + A DG+  E   ESRWSCA +++ D G C+I F+F  PQ+IVD+QVAFWKG+ER RTL++ +NG+    +ESY  STFN+ G+  N  +TV +ES+ +  NEWISL+EV   V P
Sbjct:  152 DAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTE--IESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFVTP 306
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BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7FI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI90_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 6.570e-40
Identity = 80/157 (50.96%), Postives = 102/157 (64.97%), Query Frame = 2 
Query:  842 DFVEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            D VE G+KT VGV+A+A+D RPG S  D GCGE G   C      DG+V   D ESRWSCA  +VPD G C+I FTF  PQ+IVD+QVAFW  +ER  TL++ +NG+    +ESY   TFN+ G+      TV +ES+ +  +EWISLLEV+  V P
Sbjct:   19 DAVEVGTKTEVGVSATAHDVRPGSSGNDVGCGEVGSLGCTATNTRDGIVS--DIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYD-DTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVTP 172
[Close]
BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.510e-39
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 2 
Query:  848 VEAGSKTNVGVTASAYDDRPGESAGDAGCGETG---CLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSPQDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGVHTVTMESIDIDENEWISLLEVRFMVDP 1303
            VE G+KT VGV+++A+D RPG S+GDAGCGE G   C      DG+  E   ESRWSCA ++V D G C+I FTF  PQ I+D+QVAFWKG+ERTRTL++ ING+    +ESY  +TFN+ G+    V TV +ES+ +  +EWISL+EV   V P
Sbjct:  363 VEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSE--IESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVTP 515
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8U9_9PHAE1.790e-13263.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCQ5_ECTSI3.910e-6688.33Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JFX1_9PHAE1.940e-5056.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G3F6_ECTSI1.900e-4754.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI77_ECTSI9.090e-4352.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE9.160e-4255.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI81_ECTSI2.420e-4153.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S3_ECTSI3.720e-4050.96LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FI90_ECTSI6.570e-4050.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3F4_ECTSI3.510e-3952.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:501077..508024 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.4
Seed ortholog evalue3.5e-15
Seed eggNOG ortholog2880.D7FL48
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-03_002000.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size2473
Cds size984
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930836.8022249-UTR-C-linearis_contig97:501076..5022431622930836.8022249-UTR-C-linearis_contig97:501076..502243Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 501077..502243 -
1690881274.9736173-UTR-C-linearis_contig97:501076..5022431690881274.9736173-UTR-C-linearis_contig97:501076..502243Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 501077..502243 -
1622930836.985993-UTR-C-linearis_contig97:507702..5080241622930836.985993-UTR-C-linearis_contig97:507702..508024Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 507703..508024 -
1690881275.0822308-UTR-C-linearis_contig97:507702..5080241690881275.0822308-UTR-C-linearis_contig97:507702..508024Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 507703..508024 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930836.81579-CDS-C-linearis_contig97:502243..5022671622930836.81579-CDS-C-linearis_contig97:502243..502267Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 502244..502267 -
1690881274.9860835-CDS-C-linearis_contig97:502243..5022671690881274.9860835-CDS-C-linearis_contig97:502243..502267Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 502244..502267 -
1622930836.8344545-CDS-C-linearis_contig97:502592..5027391622930836.8344545-CDS-C-linearis_contig97:502592..502739Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 502593..502739 -
1690881274.9963555-CDS-C-linearis_contig97:502592..5027391690881274.9963555-CDS-C-linearis_contig97:502592..502739Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 502593..502739 -
1622930836.8572347-CDS-C-linearis_contig97:503711..5042331622930836.8572347-CDS-C-linearis_contig97:503711..504233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 503712..504233 -
1690881275.0073228-CDS-C-linearis_contig97:503711..5042331690881275.0073228-CDS-C-linearis_contig97:503711..504233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 503712..504233 -
1622930836.8778296-CDS-C-linearis_contig97:504563..5046051622930836.8778296-CDS-C-linearis_contig97:504563..504605Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 504564..504605 -
1690881275.0199835-CDS-C-linearis_contig97:504563..5046051690881275.0199835-CDS-C-linearis_contig97:504563..504605Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 504564..504605 -
1622930836.8960605-CDS-C-linearis_contig97:504801..5048761622930836.8960605-CDS-C-linearis_contig97:504801..504876Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 504802..504876 -
1690881275.0322924-CDS-C-linearis_contig97:504801..5048761690881275.0322924-CDS-C-linearis_contig97:504801..504876Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 504802..504876 -
1622930836.912458-CDS-C-linearis_contig97:505610..5056521622930836.912458-CDS-C-linearis_contig97:505610..505652Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 505611..505652 -
1690881275.041613-CDS-C-linearis_contig97:505610..5056521690881275.041613-CDS-C-linearis_contig97:505610..505652Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 505611..505652 -
1622930836.9285247-CDS-C-linearis_contig97:505845..5059021622930836.9285247-CDS-C-linearis_contig97:505845..505902Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 505846..505902 -
1690881275.0504076-CDS-C-linearis_contig97:505845..5059021690881275.0504076-CDS-C-linearis_contig97:505845..505902Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 505846..505902 -
1622930836.9449713-CDS-C-linearis_contig97:507250..5073031622930836.9449713-CDS-C-linearis_contig97:507250..507303Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 507251..507303 -
1690881275.0625992-CDS-C-linearis_contig97:507250..5073031690881275.0625992-CDS-C-linearis_contig97:507250..507303Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 507251..507303 -
1622930836.96624-CDS-C-linearis_contig97:507680..5077021622930836.96624-CDS-C-linearis_contig97:507680..507702Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 507681..507702 -
1690881275.0736017-CDS-C-linearis_contig97:507680..5077021690881275.0736017-CDS-C-linearis_contig97:507680..507702Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 507681..507702 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17110.1prot_C-linearis_contig97.17110.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig97 502244..507702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig97.17110.1

>prot_C-linearis_contig97.17110.1 ID=prot_C-linearis_contig97.17110.1|Name=mRNA_C-linearis_contig97.17110.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=328bp
MVLWPRGTPLPTDEPTPTPEPTPEPVTPTPEPTPEPTPEPTPEPVAPTPE
PIAPTPEPIVPEPTPEPTPEPTPEPTPEPTPAPVAPTPEPIAPTPEPTPV
PAASTTPAPVVVPPTARPSTVPATSSPASPRTAEPSVAPTSPVQTKEPTL
PPIAVSPPTAQPASPPADEDDDADFVEAGSKTNVGVTASAYDDRPGESAG
DAGCGETGCLPDLAHDGVVGEGDAESRWSCAKEIVPDGGQCEITFTFDSP
QDIVDVQVAFWKGDERTRTLKMKINGDNVGEYESYPGSTFNSFGIQENGV
HTVTMESIDIDENEWISLLEVRFMVDP*
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mRNA from alignment at C-linearis_contig97:501077..508024-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17110.1 ID=mRNA_C-linearis_contig97.17110.1|Name=mRNA_C-linearis_contig97.17110.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6948bp|location=Sequence derived from alignment at C-linearis_contig97:501077..508024- (Chordaria linearis ClinC8C monoicous)
CTGCTCTATCGGGTGGGATTTGACGTCGTCACCAGAGTTCGAAATCGAGT
GCCAGCCCGACGAGTACAAGGAGGTTACGGTTGGATATGGCACCACCCTG
ATTGCCCTCAACCACTGGCGGACCACCGTCGGGGAAGCCTCAACGTACGA
GTGGAGTTTTCAAGTTGTAAGAGCGGAATCAACATTCCTCTACTATTTCG
ATTACGGGGAATTTGGTGGCGACCCTTACACCCCATACCTGTCTGGCGGA
GCTGGCTCCGAAGTGATCGCCACCATCACCGCCGGCGATGCGGCGGGCAA
CACAGACACCTGCTCCTTTTTGATGGTGCTATGGCCCCGAGGAAGTGAGT
TCAAGAAACGATAAATAAGTAGCTGCGTTGGAATCGTTTTTTCCTGTTGC
ACGGCAGACTCAGCCAATCGGTCGGAGTTTCGCGGGATAGATCCGACACT
AAAAAAGTCCCACCACGACGTGGGTACAGGGTTCGAAGCACCGAAGCAAC
TGCTTGAGTAGGGGAGATTCAGCAATGATCGTGTTCGTTCCGAGACGCGT
TGGCCGCGTACTGAAGGTATGAGAGACAAAATCAGCGTGGACGGGTGCGC
ACTCCTGATACTTTTTTCACTTTATTTTGGCATGTTCCATCGTACCCGAC
CCCGCATTCAATTTCAACTTCGCCTACCGCCTCGATGCCCTCTCCACCTG
ATGCCGTTCGGCTCCGCACAGCTCCGCTTCCCACCGACGAGCCTACGCCT
ACCCCAGAGCCCACGCCAGAGCCGGTAAGCCCTACTGAAGTCTATGGTAC
AAGGTTACAGTTAATTTTTTTTGCCAGTACCACTTTTCGCTGGCAAGACG
TACACCACTATTGAGTCTGCGTCGTTGTTATCCCTACGTCTTGATGCTGC
TTTGGGGCAAGACATGCGTGACCCTCCCTTCGGAGGACAATACCATGAGG
TGGTAAAGGCGTTTCAATGTTTCGGTAGCTCGGCAGGGCGCCCCCCCAAT
CGGGCCAAAACCTGGGAGGTACCCGCCTTGACCTTGCTTGCTAGAGAGAC
CAATTCATCAACCACGCGTCGCTTCTTCTCCAGAATTATTTCACGTTCGG
TGCACGAGCACCCAACAAGGGTGAGAGGGGTGAGAGAATACATCGCACGA
CTTTGCATGACTCAGTCGAATGATGCTCGATATTTCGGTATTTTGTGCGT
GTTCCATGCACCATATTTAACAACATATTGGTGAGATTGAGTCTCAATTG
TCGAAATGAGACTCAGATGGTTTTTGGCGATTTCAAGGGCAAAGACGTCC
GATCGGGAGCTTTCACAGTGGAACATTTTTGACCGCCTTGAAAATGCGGT
CATTTTGATGGTACTCTCGTCGACATCGGACACCATTCCAAATCATGGCA
ATTATCGAGGTGAAAGCTTTCAGCTTCTAAATCCTGGAACCACATCTTGT
ATTTTCCGTGGCGAATCCCTAGTATCTTGCCAAGGACCTATCCGACTTCA
ACAAAACGTATACCAAATTGACCACATTCTCAAGACGGTCAAAAATGTTC
CGCTGTGAAAGATCCCGATCGGACGTCTTTGCCCTTGAAATCGCCAAAAA
CCATCTGAGTCTCATTTCGACAATTGAGACTCAATCTCACCAATATGTTG
TTATTTCACGATTGTTAGCCTTCGACAACGGTGGTGTGTGTCCGTTTTAG
CAGTGTTCACCTCGCGTGCGATTTGGGCTTCCCCGCCCATTTGGGGCAGG
GTAGCCTTTCAGTACCCTAGTACATAAAGCAGCTCCAACAGGGATGATTT
CACACCCGGAGGAAAGCATGTTATATCTCCCCAAGCCAAGCTTTCGCAGT
TTCAGCTTGCGGAGAAGTCACAAGTCATGATCCAGAGGCTAGGCTCGAGC
AACCAGGAAAAGAGACCAAGTGCTACGACAATCCCGATGGAATCTGTTCT
TTTCTGGCTTCGCCAACCTTCGAAGTATCAAGATTGCTGCATCACAAAGC
AATCGAAATGAGAGGGGGAAGATAACGCCACAGCCAGCCCCCCAACTTGG
ATCCGTCGTGGAAGTGGTTTGGATCAATTCATGAGTTCTGATTCTACTTT
CGTGACACGTTTTGGTGCCCAGGTGACACCTACCCCGGAGCCCACGCCAG
AGCCCACGCCTGAACCCACGCCTGAACCGGTAGGTCTCTACATCCTTAAC
CGAAAACCCGCCAATAATGACCCAGTTCGGCAACGGATTTTGACGGGGAA
TCACGCGTGCTGAAACTCCTCAAGCAGGGGTACACGCACGGTACATGTTG
CGACATTAAGCCGTTGCAGCCACTCTCTCTCTCCCTCCGTCCTCTCTCTG
GTGGTGTTTTCAATGCTGTCAGGTTGCGCCGACACCCGAGCCCATCGCGC
CTACCCCTGAACCGGTATGTTTTGACAAAACAACAGACAAATTGGGGGAG
GACATTTATTTCGGGATAAAAGACAAATTAGGCCTGTCGTGGGGAACGCG
AGATGTTCGCCTTTCGTGACAGTTACCCGGGTGTCGTGTATTATCTATCG
TACGTGCTTTCGACGAACAGAACAACAACTAACAAAGACTTCAGTCCCTA
CTCTCACGTGTCCTGACTTTGAGTACGTGAATTCACAAGACCGCACCAGC
GAGAGTCCCCCCTAAAGATCAGCGCCGTTTGGATGCCGAAACACGTGCTC
CCCTTCACGCACATGGTTGTCCCCTTTACGCCGCCAGCAGTCTAAAAGTG
CATTTAATCTTTCCCCAGAGACGCGTCATCAGGTCATGATGTCGTATGTA
TGCAGACTAATCCGGATCATTTTTGTCAGTACTCCGTATTATTCTTTGGC
GAAACAAAAAAAGTCGGACAGAACACGTGTAGAATGCATCGAGACACGCG
CGCTCCGGTGTTTCGGCGGTGACATGAAGAACCTGCCGACAACCCCTGTT
CGCCGTTTATTTGTGTCTGGTGCTGATGTCCTAGTTGCTCCAAGTTGGTG
CAGCAGAGTCCGGGAAGGGTATCGAAACCTATCCCAACCGGAGAACAGAA
TATTTACCTGCTGCAGATGCCAGCAGGTACACAGGAGGGTGTATGAAGCA
CATCGGCAAATTAACCCTTCCTGTTTGCCGTTTTTACACGCTGCTCAGAT
TGTCCCGGAGCCCACGCCGGAGCCCACGCCGGAGCCCACGCCGGAGCCCA
CGCCTGAACCCACGCCTGCACCGGTAGGTCTCCATGTATGTTCTCTAAGC
GATCGAAACCCGCCAATAACCACCCGTGTTCGGCAACGAACGGATGTTGA
CGGGGAATCGCGTGTATGCGCTACACTCTAAAGCAGGGCGTACACGACAC
ATGTTGCGAGACTCGGTCGTTGCCACTACTCTCTCTTTATCGCCTCTGTG
CTGTTTTCAATGCTGTCAGGTTGCGCCGACACCCGAGCCCATCGCGCCTA
CCCCTGAACCGGTATGTTTTGACAAAGCAACAGACAGATTGCGGGGCGTG
ATTTCCTTCGGGATAAAAGACGAATCAGGCCTGTTGTGGGGAACGCGAGA
TGTTCGCGTGGGTGTGATCTGTTAGTCTGTCGTATGTACGTGCTTTCGAC
GAGTAGAACAGCTGAACCAAACCATAGGCTATTTCTGCCTTGGAAAACTG
TGTCCTGACTTTCAGTAGCTTTTCAGTTCACAAGAACACGCCAGACTACC
ACCTAAAGATCAGCCCCGTTTGGGTCGTAAACCTAACTCTTCCCATTTGC
CGCCTCAATGCGCTTGTCGCGTTGTCCCGGCCTGGTTGCAGACGCCCGTA
CCTGCGGCATCCACCACCCCCGCGCCGGTTGTGGTACCCCCTACCGCCAG
GCCTTCCACGGTCCCGGCCACCTCCTCTCCGGCCAGCCCCCGTACAGCCG
AACCCAGCGTGGCCCCTACGAGCCCCGTACAGACAAAGGAGCCCACGTTG
CCCCCCATCGCCGTAAGCCCTCCCACTGCCCAGCCGGCTTCCCCTCCTGC
AGATGAAGACGACGACGCCGACTTCGTGGAGGCCGGGAGCAAGACCAACG
TTGGCGTAACTGCCAGCGCCTACGACGACCGCCCGGGAGAGAGTGCGGGG
GACGCCGGCTGCGGTGAAACGGGTTGCCTGCCCGATCTTGCCCACGACGG
CGTTGTTGGCGAGGGAGACGCGGAGTCGAGGTGGTCGTGCGCCAAGGAAA
TCGTGCCCGACGGAGGCCAGTGCGAGATCACCTTCACGTTCGACAGCCCC
CAAGACATTGTCGACGTGCAGGTCGCCTTCTGGAAGGGAGACGAGCGCAC
TCGTACCCTCAAGGTGAGCTATTAAAAATGATGGTCGGCCCCTTAAAAAA
AGAAAACCTTTCTTTTGCTACAAAGATGTGTCGAAGAGCCGATTTCACGA
ACACGGGTGGATCTGGGCAGAATACTTTCTCTATCGTTTGGTGGTTGGCG
TGTAGACGCGATTAGATTTTTCCCCACCCCCTGTGATGGGAGAACGACCT
CGGGTCGATGTCGCAGCGGCGCTGAAACATACGCCCCACATCGCACGGGC
TTGAAAGATAGCAACCAGTGCACTGTAGCCTATGTTCCGTGTTACATAAA
GCTGTTGTCGCGGTTAGCGCGGGCGTTTGGTTGTCGAGATACTGCTGCTG
TAGATCAACAGTTGTGCGGGGAAGTGTATGGAGTCTACTTTTTTTTGTGG
CACGACGGTTACATACTCCACGAAGCTCGCCCTTCACGCCGTACGCCAAC
TCCGCTTGGGGCAAGTAGTGTCTCCCTGGTTGGAAAACTCTGGACGCGAT
TCGTCGTGAAACTAGAAGAAGACAGGTCTGTCATCAAGTGAGCCACCAAA
GGCTGGTTCTTGACGTTGTCAGGAATCATACCGGTGGGTCTGAATGCTGT
GGTCTCTCGACTGCTCTTGGTGCGCCGGGTTCTGCTTGTGCTTCTGTTGT
GAGCAAAAACGCCCCCTCCTTGCCCTTCTTCCTCCCGTACAAACCGCATG
CATGTGGTCCATCCCACCCTTTGGTATTTAAAAGCGCGGATGCCGCCTTT
TCTATCGACGTCCTTACATCGTGTATCCGTTTCCACCCCCCCAACACGAC
ACAACGTCAGCATGGGGGTGCGCAAGGCAGCAGCTAGTACCTGTGTAGAT
TTTTTCCAACCCCGGCGCAGCTTGTCCGCAAAACATCGATTGAAAGAAGC
AGGAGCTCTCGGTCGCGTGGTCTATATGTATGCAAACGTGTTGACCCGAC
ACCACAACCCGACCCGCTCTGCCCCAAAACTGCAGATGAAGATAAACGGC
GACAACGTCGGCGAGTACGAGTCTTACCCCGGATCTACCTTCAACTCGTT
CGGGATCCAAGAGAACGGCGTGCACACCGTTACCATGGAGTCCATCGATA
TCGACGAGAACGAATGGATCAGCCTTCTTGAGGTACCAGAGCGTTGCCAT
AGGTTTTAAGGACTGGTAGAAATGTTTGTCAGTGCACAGGAGAGCCGTTT
TCTCGTCGTTTCGCCAATTAGAGCGTTCTCGAACATGACACCTACCCGTC
TTGAGATCTACCAGCACAATCAGGGGCACCCAATACGCGCCGTTTTCCGC
CTTACGCTGCAACATCGCATGCGGTGCTCGCCGTCTGCTTCTGATCGCGC
GTGGAAAAATCGAAAATTACAGTAAGAGCAACTCTGTGCAGCTCGAATCG
TAAGAAGAAGCTGACTCACAGCTTATATTTCGATACCTTCGTCTGAACGC
TTGGCAGGTGCGCTTCATGGTGGACCCTTAGGGGTTATTCACCGATCCAC
CAAGCCCCACGAACACCACCTTCATCCATCATCAGCGCCAACTTGCGTGG
CGTCAAGGGAGATATCGCAAATGATCCGGCCGGTTCGATGGGAAAGAACT
GTTGTATCTTCCTAGGGCATGGGTTTGAGGAAACTGTCTGATCTCCTTGT
ATGATCAACCCGCTTTCACAGATGTAAAATTTACCATGTATTGATCTCTG
CATTCCCAGCTACCGTGTAGGTGGGCGAATAACCCCATTACCAACTCGAA
CACGAAGCACATTGATGTGCGCCACCACTTTCTTCGTAGAGAGTCGGTAG
AGGGGAAGGAAATACTCGTGGACGTTACCCACGCAGATCCGCGAGCACAA
GTACACTTAACTTGCAGAATGGCAGCCTAACCAGCGATGGATTCGCCGCC
CAAGCCTCGGAGGCCCAAAAGCGTCAGCACTACGCTCCCCCAGGACACAC
ACGTGTCCTTCGACGAGCGCAGCTTTCAACTTACACCTTAGCGGTGGAAA
GCTTTGGCCGTCTTGGGGAAGAGGGCATCGAATGAGTCGACACCAACGAT
TCGGGGTTGGAGTGTCCATGCCCAATAGGGCATCGTGCCCAAACATTTGC
AAGCGTTAGGGTTTCGATGTTTTGAATTGAATCGGGAGAGTATTCGTCAT
CTTTGGACAAGCAAGATTTTGCGGTAGTTTCGAATGAGAAGTAGCAAATC
ACATACTCCAGAGTATTGGTTGATTCACATGTATGTGTACTCTAGCATCG
TTCACATCATCAACACTTTTCTTCGTAGAAGTATGTGTTCGAAAACTTTT
GTTTCCGGTTATCTGGTTTATACATGAAGAAGTATCAGTACACAGGTATA
AATATGGTAAACATCTAGTGAACGCGTAGTGGACGTTGAGTTGAACTTGA
TGGGATCTATCTGCACTTACTTGTCGGAGGGAACGGCATATTAATAATAA
GTAGGTAGGTGTCCATGCACGGTCGGAATACCAGCAGGCCGATGTCCTCA
CAAAGACAATCACCAAGGATGCGTTGAGCTCCACTGAAACATTGTGAGAC
ATTAAAGTGAAAGATGAAAGTTTCGCGTGTTGTCTTGATGTGATGAGTAT
TATTGCTTTGTTTGCCCTGCGACAATGAATGGCAGATAGATTCAACCT
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Coding sequence (CDS) from alignment at C-linearis_contig97:501077..508024-

>mRNA_C-linearis_contig97.17110.1 ID=mRNA_C-linearis_contig97.17110.1|Name=mRNA_C-linearis_contig97.17110.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at C-linearis_contig97:501077..508024- (Chordaria linearis ClinC8C monoicous)
ATGGTGCTATGGCCCCGAGGAAATGGTGCTATGGCCCCGAGGAACTCCGC
TTCCCACCGACGAGCCTACGCCTACCCCAGAGCCCACGCCAGAGCCGCTC
CGCTTCCCACCGACGAGCCTACGCCTACCCCAGAGCCCACGCCAGAGCCG
GTGACACCTACCCCGGAGCCCACGCCAGAGCCCACGCCTGAACCCACGCC
TGAACCGGTGACACCTACCCCGGAGCCCACGCCAGAGCCCACGCCTGAAC
CCACGCCTGAACCGGTTGCGCCGACACCCGAGCCCATCGCGCCTACCCCT
GAACCGGTTGCGCCGACACCCGAGCCCATCGCGCCTACCCCTGAACCGAT
TGTCCCGGAGCCCACGCCGGAGCCCACGCCGGAGCCCACGCCGGAGCCCA
CGCCTGAACCCACGCCTGCACCGATTGTCCCGGAGCCCACGCCGGAGCCC
ACGCCGGAGCCCACGCCGGAGCCCACGCCTGAACCCACGCCTGCACCGGT
TGCGCCGACACCCGAGCCCATCGCGCCTACCCCTGAACCGGTTGCGCCGA
CACCCGAGCCCATCGCGCCTACCCCTGAACCGACGCCCGTACCTGCGGCA
TCCACCACCCCCGCGCCGGTTGTGGTACCCCCTACCGCCAGGCCTTCCAC
GGTCCCGGCCACCTCCTCTCCGGCCAGCCCCCGTACAGCCGAACCCAGCG
TGGCCCCTACGAGCCCCGTACAGACAAAGGAGCCCACGTTGCCCCCCATC
GCCGTAAGCCCTCCCACTGCCCAGCCGGCTTCCCCTCCTGCAGATGAAGA
CGACGACGCCGACTTCGTGGAGGCCGGGAGCAAGACCAACGTTGGCGTAA
CTGCCAGCGCCTACGACGACCGCCCGGGAGAGAGTGCGGGGGACGCCGGC
TGCGGTGAAACGGGTTGCCTGCCCGATCTTGCCCACGACGGCGTTGTTGG
CGAGGGAGACGCGGAGTCGAGGTGGTCGTGCGCCAAGGAAATCGTGCCCG
ACGGAGGCCAGTGCGAGATCACCTTCACGTTCGACAGCCCCCAAGACATT
GTCGACGTGCAGGTCGCCTTCTGGAAGGGAGACGAGCGCACTCGTACCCT
CAAGACGCCCGTACCTGCGGCATCCACCACCCCCGCGCCGGTTGTGGTAC
CCCCTACCGCCAGGCCTTCCACGGTCCCGGCCACCTCCTCTCCGGCCAGC
CCCCGTACAGCCGAACCCAGCGTGGCCCCTACGAGCCCCGTACAGACAAA
GGAGCCCACGTTGCCCCCCATCGCCGTAAGCCCTCCCACTGCCCAGCCGG
CTTCCCCTCCTGCAGATGAAGACGACGACGCCGACTTCGTGGAGGCCGGG
AGCAAGACCAACGTTGGCGTAACTGCCAGCGCCTACGACGACCGCCCGGG
AGAGAGTGCGGGGGACGCCGGCTGCGGTGAAACGGGTTGCCTGCCCGATC
TTGCCCACGACGGCGTTGTTGGCGAGGGAGACGCGGAGTCGAGGTGGTCG
TGCGCCAAGGAAATCGTGCCCGACGGAGGCCAGTGCGAGATCACCTTCAC
GTTCGACAGCCCCCAAGACATTGTCGACGTGCAGGTCGCCTTCTGGAAGG
GAGACGAGCGCACTCGTACCCTCAAGATGAAGATAAACGGCGACAACGTC
GGCGAGTACGAGTCTTACCCCGGATCTACCTTCAACTCGTTCGGGATCCA
AGAGAACGGCGTGCACACCGTTACCATGGAGTCCATCGATATCGACGAGA
ACGAATGGATCAGCCTTCTTGAGATGAAGATAAACGGCGACAACGTCGGC
GAGTACGAGTCTTACCCCGGATCTACCTTCAACTCGTTCGGGATCCAAGA
GAACGGCGTGCACACCGTTACCATGGAGTCCATCGATATCGACGAGAACG
AATGGATCAGCCTTCTTGAGGTGCGCTTCATGGTGGACCCTTAGGTGCGC
TTCATGGTGGACCCTTAG
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