mRNA_C-linearis_contig97.17073.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig97.17073.1

>prot_C-linearis_contig97.17073.1 ID=prot_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=421bp
MGCTRLAPRLELGLGTFTGICALGMRGVCAFVPHSSRFASVPSFTTRSTR
IHDVSATWTQHQRTRCYAAATTMSTDSDGRKKVVFLGTPDIAASSLELLI
EASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPA
TARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPL
YRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPE
LLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCF
KTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDA
TEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANG
LRGEELSWVELEPLEEAVPG*
back to top

mRNA from alignment at C-linearis_contig97:203935..206905+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17073.1 ID=mRNA_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2971bp|location=Sequence derived from alignment at C-linearis_contig97:203935..206905+ (Chordaria linearis ClinC8C monoicous)
GCTCCCATCAGCATTGATTGTTCCTGCCTCACGCAGCACCTATGGGTTGC ACGCGGTTAGCACCTAGGTTAGAATTGGGGTTGGGAACCTTCACAGGAAT CTGTGCTCTAGGCATGCGAGGAGTCTGCGCGTTTGTGCCTCATTCCTCGA GGTTTGCATCCGTCCCGTCCTTCACTACACGTAGCACTCGAATACATGAT GTTTCTGCAACATGGACACAGCACCAACGCACACGCTGCTACGCGGCGGC CACAACCATGAGCACCGACAGCGACGGGCGAAAGAAAGTGGTGTTCCTCG GCACGCCGGATATTGCAGCCTCGTCGCTGGAGCTGCTGATAGAGGCGTCT CGACAGGGCAAAGGCGGCGGATTTGACGTTGTCCGAGCAGTGTCCAACCC GCCGGCCCGCACGGGCCGCAAAAAAGTTCTGCAACCTTCTCCGGTCCAGG CTCTCGCGGAACGCAAGAGCATCCCGGTCATGACGCCGGCCACCGCCCGC GACGAAGAGTTTCTGGCTGAGCTGGAGGGGCTGGAGCCGGATCTGTGCAT CACCGCAGCCTACGGGCAGTTCCTGCCGCGACGGTTTCTGGATATCCCCA AGTACGGGACCTTGAACGTGCACCCCTCGCTGCTTCCGCTCTACCGGGGG GCATCGCCAGTTCAGCGATGCCTTGAGGCCGGAGATACCAAAACCGGAGT CACGGTGGCGTTTACGGTGCTCAAAATGGACGCGGGGCCTGTCGTCAGGC AGACGGTGAGAGACGTAGGGGAGCGCGGGGATGCCATCGTATATTGTACG TTCCGTGGATAGGTACGCGCGCGTTGCGTGCGGCTGTGTTGCGTGCAACG GCCGTGCTGATTGTGCCAGGTGATTTTGGAGCAGCATCGTCTTGGTGCAC TGGGGGAAAGGTCTAGTCTATATTCTGTTGTCGCGATTCTCACACAAGTC TGGCCCCAAGTAGCGTCGTAGTCTACAGTATCGCACACGAACTTGCCCAT CTACCTTCGACGGCATACTGCCGTTATTCGAGGCAGGTGTTGTCTTGGAA GTTGCTTGGTCAGAAGATAGGCAGATGTTGTGCAAAGCTCTGGATTAAGC TCTCAAGAGAGAAGTGAGAGGAGGGGCGCGTTTCGACGCTAACCCAACGC AGACTGGACTCATACACGTATACCCCAGGACAACGCAGTAACGAACGCGT GTGCCCCTAAAACCCGGTGAATGCAACAGATGTTGTGCCATGTAAGGGTT GGTAAATGCCAGCCGGGACCTCGAACGACCGAGGCTCGGGTCAAAATACC ACGCTGTGTAGCAGTATCGCCGTGCCATGCCACGGCCATTGAATGGCCGT TGCCCGTGCGCTTGCCGCTGTTGGTAATCTCGATGGCAACAGGTGCGCGA GCTGGACGGCTCGGAAAAGGCACCTGAGCTACTGCAAGAGCTGTTTTTGG AGGGCACTGGACAGCTCATCGACTGCCTACCCGGCGTGTGGGACAACACT GTGAAGTGAGCGCCCAGTTATAGTGTTCGATTAACCCGGGCGGTTCGGGC GTCGGTCGTCGCGTACTGCATTAGCATTCCAACGCAGGCATGCAGGGAGA GAGAGAGAGAGAGAGAGAGAGAATGAGACCTAGAAAGAGCCCTGAACCAG TTCGACCTATGGCGGTTGGTGACCGTCGAGTGGCGCCAAGGTTTTCCTGT GGTTTAATTCGCCCGACGAACATCGTTTTGGTTACTAGTAGATAGTAGAA GGAGGAGGTCCAGCTGTACGTACCTACCACGGTTGTTTCGTCGCAGATCG TTCATGTTCCACCCACCCCTGTTTTCCGCATTTTCTGTCAGGAAAACTCC TCAGGACGATGCTGCGGCCGTGAAAGCTGCCAAGGTTTCTGTCCAAGAGG CGCGGTGCTGTTTCAAGACCACCAGCGCAGCAACCATCCACAACAAGTGA GGCGAAGCACCACACCTGGCTCTGCGTCATGTTGATGCCCCCCTGCTTGT GTGCACATAGTAAACTACCTTGCGCACCAGCCGTCAGCGACAATGCTTTC CCTGTATCTACAAGTAGGATACGTTCTTCGAGGATTGTGAACACCAGATT CATGATGTCAGGCACATCTAGTTTGTTCCCTCGCCGCTTGTAGAGCTTTG TACGGACCGGTTACCTCCGTCAGCTCACCTCATACGCCAACACACCGTGA TAACGTGTTGGAGCTCGCAAAAATCGATACAAAGCATGAGGTGTAAGACT AGTTGAACGACGGCACCGAACGAGTGTAGATTACTCATCTACACCTTGAA CATGTTTGTTTTTTTGCCTCCCTTGATCCTACGGCACACGGACCGCCTCG CAGAGTGAGAGCATTCGCGGGCTGGCCGGGCACGTGGGCCATGTTCTCCT GGGGGAAAGACGGAAGCGAGGCTTCGGAACCGCGAAAAGTGAAGCTGATC ACCACTGCCGTGGGAGACGCAACAGAGGGGGGTGGGGCACCGGCTAGACG ACAAGTGGTGTTGAGGGGCAATGCGCTAGAGTTGACGTGTGCGGACGGCA GCGTGCTGAAGGTGCTGGAGCTACAGCCGTTGAATAAGAACGTCATGAGC GCAAAGGCGTTTGCGAATGGCCTGAGGGGGGAGGAACTTAGCTGGGTTGA GCTCGAGCCATTAGAGGAAGCCGTTCCAGGATGACCGCTGCTCGTGGTTA ACAAACATATGTACGTTGGTACAAGTTTTGCGTTGCGCGCTACGCATGGG TTGCAGCCTTGGTGGTGGCTGCAGCCTTGGTGGTGGCTGCAGCCCTGGTG GTTGCACCCTCGGTGGTTGCGCAACACCTGAACTAGCTTCTACCATGGTC GGTACGGCAAGCGTTAACTCCAAAGTGTGTTGGCCTTTTCAAAAGACGGG GAAACACAGGTTCACACGATCCGCGATCCTTCGGGGTTGTGACATGGCAC CCAACAACATAGCACATGACG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig97:203935..206905+

>mRNA_C-linearis_contig97.17073.1 ID=mRNA_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at C-linearis_contig97:203935..206905+ (Chordaria linearis ClinC8C monoicous)
ATGGGTTGCACGCGGTTAGCACCTAGGTTAGAATTGGGGTTGGGAACCTT
CACAGGAATCTGTGCTCTAGGCATGCGAGGAGTCTGCGCGTTTGTGCCTC
ATTCCTCGAGGTTTGCATCCGTCCCGTCCTTCACTACACGTAGCACTCGA
ATACATGATGTTTCTGCAACATGGACACAGCACCAACGCACACGCTGCTA
CGCGGCGGCCACAACCATGAGCACCGACAGCGACGGGCGAAAGAAAGTGG
TGTTCCTCGGCACGCCGGATATTGCAGCCTCGTCGCTGGAGCTGCTGATA
GAGGCGTCTCGACAGGGCAAAGGCGGCGGATTTGACGTTGTCCGAGCAGT
GTCCAACCCGCCGGCCCGCACGGGCCGCAAAAAAGTTCTGCAACCTTCTC
CGGTCCAGGCTCTCGCGGAACGCAAGAGCATCCCGGTCATGACGCCGGCC
ACCGCCCGCGACGAAGAGTTTCTGGCTGAGCTGGAGGGGCTGGAGCCGGA
TCTGTGCATCACCGCAGCCTACGGGCAGTTCCTGCCGCGACGGTTTCTGG
ATATCCCCAAGTACGGGACCTTGAACGTGCACCCCTCGCTGCTTCCGCTC
TACCGGGGGGCATCGCCAGTTCAGCGATGCCTTGAGGCCGGAGATACCAA
AACCGGAGTCACGGTGGCGTTTACGGTGCTCAAAATGGACGCGGGGCCTG
TCGTCAGGCAGACGATGGGTTGCACGCGGTTAGCACCTAGGTTAGAATTG
GGGTTGGGAACCTTCACAGGAATCTGTGCTCTAGGCATGCGAGGAGTCTG
CGCGTTTGTGCCTCATTCCTCGAGGTTTGCATCCGTCCCGTCCTTCACTA
CACGTAGCACTCGAATACATGATGTTTCTGCAACATGGACACAGCACCAA
CGCACACGCTGCTACGCGGCGGCCACAACCATGAGCACCGACAGCGACGG
GCGAAAGAAAGTGGTGTTCCTCGGCACGCCGGATATTGCAGCCTCGTCGC
TGGAGCTGCTGATAGAGGCGTCTCGACAGGGCAAAGGCGGCGGATTTGAC
GTTGTCCGAGCAGTGTCCAACCCGCCGGCCCGCACGGGCCGCAAAAAAGT
TCTGCAACCTTCTCCGGTCCAGGCTCTCGCGGAACGCAAGAGCATCCCGG
TCATGACGCCGGCCACCGCCCGCGACGAAGAGTTTCTGGCTGAGCTGGAG
GGGCTGGAGCCGGATCTGTGCATCACCGCAGCCTACGGGCAGTTCCTGCC
GCGACGGTTTCTGGATATCCCCAAGTACGGGACCTTGAACGTGCACCCCT
CGCTGCTTCCGCTCTACCGGGGGGCATCGCCAGTTCAGCGATGCCTTGAG
GCCGGAGATACCAAAACCGGAGTCACGGTGGCGTTTACGGTGCTCAAAAT
GGACGCGGGGCCTGTCGTCAGGCAGACGGTGCGCGAGCTGGACGGCTCGG
AAAAGGCACCTGAGCTACTGCAAGAGCTGTTTTTGGAGGGCACTGGACAG
CTCATCGACTGCCTACCCGGCGTGTGGGACAACACTGTGAAGTGCGCGAG
CTGGACGGCTCGGAAAAGGCACCTGAGCTACTGCAAGAGCTGTTTTTGGA
GGGCACTGGACAGCTCATCGACTGCCTACCCGGCGTGTGGGACAACACTG
TGAAGAAAACTCCTCAGGACGATGCTGCGGCCGTGAAAGCTGCCAAGGTT
TCTGTCCAAGAGGCGCGGTGCTGTTTCAAGACCACCAGCGCAGCAACCAT
CCACAACAAGAAAACTCCTCAGGACGATGCTGCGGCCGTGAAAGCTGCCA
AGGTTTCTGTCCAAGAGGCGCGGTGCTGTTTCAAGACCACCAGCGCAGCA
ACCATCCACAACAAAGTGAGAGCATTCGCGGGCTGGCCGGGCACGTGGGC
CATGTTCTCCTGGGGGAAAGACGGAAGCGAGGCTTCGGAACCGCGAAAAG
TGAAGCTGATCACCACTGCCGTGGGAGACGCAACAGAGGGGGGTGGGGCA
CCGGCTAGACGACAAGTGGTGTTGAGGGGCAATGCGCTAGAGTTGACGTG
TGCGGACGGCAGCGTGCTGAAGGTGCTGGAGCTACAGCCGTTGAATAAGA
ACGTCATGAGCGCAAAGGCGTTTGCGAATGGCCTGAGGGGGGAGGAACTT
AGCTGGGTTGAGCTCGAGCCATTAGAGGAAGCCGTTCCAGGATGAAGTGA
GAGCATTCGCGGGCTGGCCGGGCACGTGGGCCATGTTCTCCTGGGGGAAA
GACGGAAGCGAGGCTTCGGAACCGCGAAAAGTGAAGCTGATCACCACTGC
CGTGGGAGACGCAACAGAGGGGGGTGGGGCACCGGCTAGACGACAAGTGG
TGTTGAGGGGCAATGCGCTAGAGTTGACGTGTGCGGACGGCAGCGTGCTG
AAGGTGCTGGAGCTACAGCCGTTGAATAAGAACGTCATGAGCGCAAAGGC
GTTTGCGAATGGCCTGAGGGGGGAGGAACTTAGCTGGGTTGAGCTCGAGC
CATTAGAGGAAGCCGTTCCAGGATGA
back to top