mRNA_C-linearis_contig97.17073.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: D8LKZ7_ECTSI (Methionyl-tRNA formyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ7_ECTSI) HSP 1 Score: 594 bits (1531), Expect = 3.580e-208 Identity = 327/445 (73.48%), Postives = 354/445 (79.55%), Query Frame = 3 Query: 42 MGCTRLAPRLELGLGTFTGICALGMRGVCAFVP--------------HSSRFASVPSFTTRSTRIHDVSATWTQHQRTRCYAAATTMSTDSDG--RKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAV------GDATEGGG----APARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELEPLEEAVP 1298 MGC R LG TGI ALGMR AFVP H +R A VP+ T RS +A TT S D+ RKKVVFLGTP+IAASSL LL+EASRQGKGGGFDVVRAVSNPPARTGRKKVLQPS VQALA+ + I VMTP TARDEEFLA LE L+PDLCITAAYGQFLPRRFLDIPK+GTLNVHPSLLPLYRGASPVQRCLEAGDT+TGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGT QLI+CLPGVWDNTV+K+PQDDAAAVKAAK+SV EARCCFKTTSA TIHNKVRAFAGWPGTWAMFSWGK+G++ SE RKVKLITTAV GD +GG A A RQVV++G+ALELTC+DGSVL+VLELQPLNK VMSAKAFANGLRG+E+ WVELEPL +AVP Sbjct: 31 MGCKR-------PLGAITGIYALGMRCSLAFVPSTAPHALRLASNGLHRARGAVVPTSTRRSLG-----------------SAKTTTSMDTANVERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGITVMTPGTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDTETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIECLPGVWDNTVEKSPQDDAAAVKAAKISVDEARCCFKTTSATTIHNKVRAFAGWPGTWAMFSWGKEGTD-SEARKVKLITTAVADPAAAGDDADGGTIEETAVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELEPLADAVP 450
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A835YXF4_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF4_9STRA) HSP 1 Score: 397 bits (1020), Expect = 3.360e-132 Identity = 202/333 (60.66%), Postives = 239/333 (71.77%), Query Frame = 3 Query: 279 RKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDATEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELE 1277 RKKVVFLGTPD+AA SL LL+EAS +G+GGGFD+ V+ PPARTGR K + PS V LA++ +PVM P ARD EFL L L PDLCITAAYGQFLP++FLDIP++GTLN+HPSLLP YRGASPVQRCL+AGD TGVT+ FT LKMD+GPV+RQ R L G EKAP LL+ELF +G L+ LP VWD + + QDDA A +A K+ EARC F A IHNKVRAFAGWPGTW +WG KVKL+TTAVG+ GG R VVL G ALE+TC DGSVL+VLE+QP K VM A++F NG RG ++WV+ E Sbjct: 10 RKKVVFLGTPDVAAHSLSLLLEASSKGEGGGFDISAVVTQPPARTGRGKKVLPSAVHQLADQHGLPVMVPERARDPEFLEALRELGPDLCITAAYGQFLPQKFLDIPRHGTLNIHPSLLPKYRGASPVQRCLQAGDAVTGVTILFTELKMDSGPVLRQRSRALRGDEKAPALLRELFADGAAALVGALPEVWDGSAQPVAQDDAQATEAPKLDAAEARCDFAKEGARAIHNKVRAFAGWPGTWVRLAWG------GRATKVKLVTTAVGEGAGRGG----RGVVLAGGALEVTCRDGSVLRVLEVQPEGKRVMDARSFVNGARGAAVTWVDEE 332
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: W7T6E6_9STRA (Methionyl-tRNA formyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6E6_9STRA) HSP 1 Score: 365 bits (938), Expect = 7.300e-119 Identity = 190/339 (56.05%), Postives = 236/339 (69.62%), Query Frame = 3 Query: 261 STDSDGRKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKV--KLITTAVGDATEGGGAPARRQVVLRGN--ALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSW 1265 S+ S G K+VVFLGTPD+AA +L L+ AS+ G+GGGF++V V+ PPA +GRK L PSPVQ LAE + +PV+ P A+D FL+ LE L PDLCITAAYG FLP +FL IP+YGTLN+HPSLLP YRGASPVQR L+AGD TGV+V FT LKMDAGP++ Q L G EKAPELLQ LF GT L++ LP VWD T + Q + A +A K+ +EA+ CF+ SA +HNKVRAFAGWPGTWA+F ++G + + V K++TT VG+ EG GA R VL G L + C DGSVL +LE+QP K VM K++ANGLRG L W Sbjct: 74 SSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGA-GRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRW 411
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A7S1XQ41_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQ41_9STRA) HSP 1 Score: 356 bits (914), Expect = 1.790e-116 Identity = 188/340 (55.29%), Postives = 235/340 (69.12%), Query Frame = 3 Query: 276 GRKKVVFLGTPDIAASSLELLIEASRQGKGGG-FDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDATEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELEPLEEA 1292 G KKVVFLGTPD+AA SLE+L++ S +G G +++V V+NPPAR GR K + SPV LAE + + +TPA+A+D EFL ELE + DLCITAAYGQ+LP+RFL PK+GTLNVHPSLLP +RGASPVQR LEAGD TGV+V FTV KMDAGP++ Q R L G E+APELL ELF EGT L+D L GV+D + + QD+AA A K+S +ARC + +AATIH++ R FAGWPGTW M S E EP+K K T +G EG GA R+V L G A +TCADGSVL + ++QP K +M AKA+ NG+RG ++ WV E A Sbjct: 3 GAKKVVFLGTPDVAARSLEILLDRSAEGAAAGLYEIVGVVTNPPARKGRGKKIVASPVGTLAEERGLKCLTPASAKDAEFLDELEAMGVDLCITAAYGQYLPKRFLATPKFGTLNVHPSLLPRWRGASPVQRSLEAGDETTGVSVLFTVTKMDAGPILAQADRTLGGDERAPELLMELFEEGTNLLVDNLAGVFDGSAEPWEQDEAAVTAADKISSDDARCDPASEAAATIHHRARGFAGWPGTWVMLS-----IEGGEPQKFKFSHTRLG---EGAGAADSREVTLEGKAARITCADGSVLDIEKIQPPTKKMMDAKAWWNGVRGRKVEWVPAPAPEPA 334
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A7S0L2B0_9EUKA (Methionyl-tRNA formyltransferase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2B0_9EUKA) HSP 1 Score: 357 bits (915), Expect = 4.990e-116 Identity = 208/390 (53.33%), Postives = 249/390 (63.85%), Query Frame = 3 Query: 117 RGVCAFVPHSSRFASVPSFTTRSTRIHDVSATWTQHQ---RTRCYAAATTMSTDSDGRKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKT--PQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDATEGGGAPARRQVVLRGNA-LELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWV 1268 RGVC +S + S + ++R AT + R C AAA RKKVVFLGTP +AA SLELL+EASR G+GGGFDV VS P ARTGRKK+L PSPV A+AE + + V+ P A++ FLAE+E + PDLCITAAYG FLPRRFL+I K GTLN+HPSLLPLYRGA+P+QRCLEAGD GV+V FTVLKMDAGP++RQ R L E+APELL ELF GT L+D LP VWD T K+ QD A A AAKVSV+EA F AA HN+VRAF+ WPGTW S G ++EP + KL+ T V D G AR + + N L + CADGSVL+VL L K + A AF NGL G + WV Sbjct: 4 RGVCVLACLASALPTAGSLLSPTSRAFAARATPFSRRCAPRALCSAAA--------DRKKVVFLGTPSVAARSLELLLEASRAGRGGGFDVAAVVSQPDARTGRKKLLTPSPVSAMAEAQGVRVLKPPNAKEVGFLAEIEEIAPDLCITAAYGCFLPRRFLEIGKCGTLNIHPSLLPLYRGAAPLQRCLEAGDEVGGVSVLFTVLKMDAGPILRQVRRPLATEEQAPELLLELFETGTELLVDALPSVWDGTYKEVLEEQDGALATSAAKVSVEEAALDFSVIGAAAAHNRVRAFSPWPGTWTAISIG-----SAEPVRAKLLQTRVID----GLLEARTRSLAHSNGGLRIVCADGSVLEVLRLTMPGKKPVGASAFWNGLNGRSVEWV 376
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A6S9KXU3_HETAK (Methionyl-tRNA formyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KXU3_HETAK) HSP 1 Score: 356 bits (913), Expect = 1.390e-115 Identity = 184/336 (54.76%), Postives = 231/336 (68.75%), Query Frame = 3 Query: 258 MSTDSDGRKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDATEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSW 1265 M + S RKKV+FLGTPD+AA +L L++AS +G+GGGFD+ V+ PPA GRKK L PSPVQ LAE K + V+TP A+D+ F+ L + PDLCITAAYGQFLP +FL+IPK+GTLN+HPSLLP +RGASPVQR LEAGD TGV+V FTVLKMDAGP+ + G E+AP LL+ LF GT L++ LP VWD T+K T QD+A AV A K+S + F AA HN+ R FAGWPG + F G E+ EP +K++TT + A E G + ++V L+GN LE+ C DGSVL V ELQP NK M+ KA+ NGLRGE + W Sbjct: 49 MMSSSTDRKKVIFLGTPDVAAQTLNRLLKASEEGRGGGFDISAVVTQPPAPAGRKKKLTPSPVQVLAEEKGLIVLTPEKAKDDNFIETLTQIGPDLCITAAYGQFLPTKFLNIPKFGTLNIHPSLLPRWRGASPVQRALEAGDAVTGVSVLFTVLKMDAGPIAKSIEYTCTGDEQAPWLLEHLFGLGTDGLVEVLPAVWDGTIKTTEQDEATAVAADKISKADGLLDFGAMGAAECHNRGRGFAGWPGVQSTFLIG----ESDEPTSIKILTTKL-VAKESGSSEPTQEVKLKGNLLEVICGDGSVLGVTELQPPNKKGMAVKAWWNGLRGERVRW 379
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: R1CZB6_EMIHU (Methionyl-tRNA formyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZB6_EMIHU) HSP 1 Score: 357 bits (916), Expect = 1.750e-115 Identity = 198/364 (54.40%), Postives = 240/364 (65.93%), Query Frame = 3 Query: 264 TDSDGRKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQL------IDCLPGVWDNTV--KKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDAT---------EGGGAPARRQVVLR--GNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELEPLEEAVP 1298 T S +++VVFLGTP +AA SLELL++AS QG GGGF+V VS PPAR+GRK L SPVQ LAE + I ++TPA+A++E FLA L+ L+PDLCITAAYG FLP+RFLDIP++GTLNVHPSLLPLYRGA+P+QRCLEAGD GV+VAFTVLKMDAGP++RQ R L G E+ P LL ELF GT L +D LP VWD + + PQ+DA A KAAK+S +A + SA+ HNKVRAFAGWPGTW S G +EP +VKL+ T +G A + P RQV L G AL L C DGS+L+VL L K + A+AF NGL G W P A P Sbjct: 31 TMSAAKRRVVFLGTPAVAARSLELLLDASAQGGGGGFEVAAVVSQPPARSGRKMKLTASPVQTLAEARGIELLTPASAKEEAFLARLDELQPDLCITAAYGCFLPQRFLDIPRFGTLNVHPSLLPLYRGAAPLQRCLEAGDAVAGVSVAFTVLKMDAGPLLRQEERPLVGDEQEPPLLLELFERGTEPLEAEDLLLDALPSVWDGSCAGQLAPQEDARATKAAKLSTADAELRLEQLSASEAHNKVRAFAGWPGTWTRISIG-----GAEPIRVKLLQTRLGAAARSRHLSPPLQSSSRPTGRQVALAAGGGALRLVCGDGSLLEVLRLTLPGKKPVDARAFWNGLNGRRAEWASAPPDAAAAP 389
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A7S2Y3A0_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3A0_9STRA) HSP 1 Score: 342 bits (878), Expect = 8.640e-110 Identity = 187/360 (51.94%), Postives = 234/360 (65.00%), Query Frame = 3 Query: 210 TWTQHQRTRCYAAATTMSTDSDGR--KKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAEL-EGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKL-ITTAVGDATEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELE 1277 T T H T YA ++G K+VVFLGTP +AA SLELL++AS+ G+GGGF+V V+ PPAR+GRKK L PSPV LAE + IPV+TP A+DE+FL L E + PDLCITAAYGQFLP +FL+IPK+GTLN+HPSLLPLYRGASPVQR L+ G +TGV+V FTVLKMDAGP+VRQ LDG E+ P+LL LF GT +L+D LP VW PQD+ A KA K+ E F+ A HNKVR FAGWPGTWA FS G +P +K+ + + AT + + + + +E+ C DGS+ + E+Q NKN +K F NGLRGEE+SW E Sbjct: 69 THTFHSSTSQYATGEDHGEATEGSDPKRVVFLGTPPVAARSLELLLDASKSGRGGGFEVSAVVTQPPARSGRKKRLTPSPVHQLAEAQGIPVLTPEKAKDEDFLQALREDINPDLCITAAYGQFLPTKFLNIPKFGTLNIHPSLLPLYRGASPVQRSLQDGVAETGVSVLFTVLKMDAGPIVRQPRITLDGDEQTPDLLLRLFELGTKELVDALPSVWSGECIPIPQDETLATKADKIDKSEGLLDFRE-GAEVCHNKVRGFAGWPGTWAPFSIG-----GKDPVNLKIKASKIISRATNQPSSLSNNASLNKDGVIEVQCDDGSIFGICEIQAPNKNSQPSKVFWNGLRGEEMSWATEE 422
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A0G4EPG3_VITBC (Methionyl-tRNA formyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPG3_VITBC) HSP 1 Score: 329 bits (843), Expect = 8.180e-105 Identity = 178/371 (47.98%), Postives = 237/371 (63.88%), Query Frame = 3 Query: 207 ATWTQHQRTRCYAAATTMSTDSDGRKKVVFLGTPDIAASSLELLIEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDNTVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPR-----KVKLITTAV-----GDATEGGGAPAR----RQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRGEELSWVELE 1277 A T R A+A+T + R+KVVFLGTPD+AA L+ + +A+++ GFD++ V+NPPA GRK+ + PSPVQA AE +PV P DE FL E+E L PDLCITAAYG FLP+RFLDIP+YGTLN+HPSLLP YRGA+PVQR LEAG+ TGV+V TVLKMDAGPV++Q L G E P+LL LF GT L+D LP VW PQD++ A KA K++ E F +AA+ HNK+RAF+GWPG W+ F+ + + P+ K+KL+++ + A++G + A R + L+G+AL++ C DGS L + +LQP ++ M AKAF NGLRG + WV E Sbjct: 37 AAGTARSRVSSLASASTEGAEGVVRRKVVFLGTPDVAALCLQRIHKAAQEDSS-GFDLMGVVTNPPAPVGRKRTVVPSPVQAYAEENGLPVWAPDKPSDEAFLNEMEALSPDLCITAAYGGFLPQRFLDIPEYGTLNIHPSLLPKYRGAAPVQRALEAGEAVTGVSVVRTVLKMDAGPVLKQIEYPLTGDETCPQLLHTLFELGTDALLDLLPSVWRREAPAQPQDESLATKARKLTADEGELRFNRETAASAHNKIRAFSGWPGCWSEFTLTSGSDDDAPPQDTETLKMKLLSSRLLRGGPSSASDGNASSAPPSADRLIDLQGDALKIVCFDGSELGITQLQPQSRKAMGAKAFWNGLRGRLVRWVGAE 406
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Match: A0A8J5X4E8_DIALT (Methionyl-tRNA formyltransferase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4E8_DIALT) HSP 1 Score: 314 bits (804), Expect = 3.930e-99 Identity = 178/333 (53.45%), Postives = 215/333 (64.56%), Query Frame = 3 Query: 282 KKVVFLGTPDIAASSLELLIEASR-QGKGGGFDVVRAVSNPPARTGRKKVLQPSPVQALAERKSIPVMTPATARDEEFLAELEGLEPDLCITAAYGQFLPRRFLDIPKYGTLNVHPSLLPLYRGASPVQRCLEAGDTKTGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTGQLIDCLPGVWDN--TVKKTPQDDAAAVKAAKVSVQEARCCFKTTSAATIHNKVRAFAGWPGTWAMFSWGKDGSEASEPRKVKLITTAVGDATEGGGAPARRQVVLRGNALELTCADGSVLKVLELQPLNKNVMSAKAFANGLRG-EELSWV 1268 ++VVFLGTP +AA SLE+L++A+R F+VV VS PPA GRKKVL SPV ALA+ + + V+TP +ARD FL ELE + DLC+TAAYG FLP RFL IP GTLN+HPSLLP +RGA+PVQR LEAGD TGVTV FTVLKMDAGP+VRQ L G E+ PELL+ LF G +L+DCLP VW + QD+ AA A K+S EA F SA +HN VRAFA WPGT S G EP VKL T + + GA R + L G AL CADGSVL + ELQ + + A+AF NGL+G +ELSW+ Sbjct: 68 RRVVFLGTPAVAAHSLEMLLDAARPHAPDSTFEVVAVVSQPPAPAGRKKVLTNSPVHALADARGVRVLTPKSARDGAFLDELEAMGIDLCVTAAYGCFLPARFLAIPSCGTLNIHPSLLPRWRGAAPVQRTLEAGDAVTGVTVLFTVLKMDAGPIVRQRTLPLRGDEQCPELLRNLFEIGCHELLDCLPDVWSGEAAARARAQDEGAATTAPKLSKDEALGSFAAQSATQLHNAVRAFAEWPGTLVSLSVG------GEPTDVKLCRTRLPASDAAAGAARTRALTLDGAALVAVCADGSVLHIEELQVAGRRRVDARAFWNGLQGKDELSWL 394 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17073.1 >prot_C-linearis_contig97.17073.1 ID=prot_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=421bp MGCTRLAPRLELGLGTFTGICALGMRGVCAFVPHSSRFASVPSFTTRSTRback to top mRNA from alignment at C-linearis_contig97:203935..206905+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17073.1 ID=mRNA_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2971bp|location=Sequence derived from alignment at C-linearis_contig97:203935..206905+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:203935..206905+ >mRNA_C-linearis_contig97.17073.1 ID=mRNA_C-linearis_contig97.17073.1|Name=mRNA_C-linearis_contig97.17073.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at C-linearis_contig97:203935..206905+ (Chordaria linearis ClinC8C monoicous)back to top |