mRNA_C-linearis_contig97.17069.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig97.17069.1
Unique NamemRNA_C-linearis_contig97.17069.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: D8LKZ4_ECTSI (Flagellar/basal body protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ4_ECTSI)

HSP 1 Score: 865 bits (2234), Expect = 1.980e-296
Identity = 548/904 (60.62%), Postives = 612/904 (67.70%), Query Frame = 2 
Query:  461 MPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITSPGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFPIDQSRVVSKQDDYGDRRNGGSXXXXXXXXXXXXXXXXXXXL------TPRPPSSKPSSPSARAVSRPSXXXAGRGRKAGQQREPARGTVVDXXXXXXXXXXXXXXXXXXXXXXEGKRQTPRSA--RSKSTLHAGGSEHPTPAAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRSTLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASKQXXXXXXXXEKVPASGRAGAAGALPAGARKKGRAAPKPGSSTSAGASATTAVRGGSAKLAAGGRKSVSGRSGGGTPVKALNAAAVPPLVLARVEGAGDTAPTNGSGKFKKTPKKGVKAKGAPPVGPSAPA-QRPKSSPASRSISSPRRAAAXXXXXXXXXXXDAPRRAPSAPSKT-GATRADAGXXXXXXXXXXTTGRGAKAKG------GGRGNG---------KKEVLPLPPLKSKVKKAAANISS 3097
            MPRWY PTGP+DDTV+FESRFESGNLRSAERI ESEYNL LAFDINTDRHTQWFYFRMSNLR+GRPYKLNMQNLMKTEAVYNLGMQPLAYS+ RAEQEGVGWYRTGSDACYFKNQ TRAGLKPFWTLTF V+T F QDTLYLAHCFPYRY+DLQ+YL ++E SPLGV  AIRRR LCETLAGN CDLLTI++PGG H  KKGIVISARVHPGETNASWMMKGVLD+L SDCHCAVALRDKF+FKIVP+LNPDGVIVGN RCSLAGGDLNRQY+ PKREL+PEV+ LKQMI+NF IGKEVLL+VDLHGHSKKSNIFMYGVENPTD+ALYMRER++P+LL +ASPLFN  DCTFDIGKGKEGCGRVVVR+QLGIVNAYTMEASFMGADQGEFQG+HFHQGHYEAMGHSLC+ LLDLVDTDQ KVEGIV++ ++KFPIDQSRVVSK+DDYG   +   XXXXXXXXXXXXXXXXXXX         RP SSKPS+P+ R         +  G +         GT+ +                      EGK  TPR A  +SKS    G     T  A                                  TP+ + KA      XXXXXXXXXXXXXXXX            +S   XXXXX  EKV  +G A          +++G+ A    SS+   ++ TT  RG S KLAA GR       GGGT  K    A VPPL LAR       +   GS +   +     K KG P VG + P  +RP SSP SRS++SPRR A            D P+R+PSAP+KT G  RA+             TG G K KG      GG G           KKE LPLPPL+SK   AA   +S
Sbjct:    1 MPRWYSPTGPEDDTVMFESRFESGNLRSAERIGESEYNLQLAFDINTDRHTQWFYFRMSNLRRGRPYKLNMQNLMKTEAVYNLGMQPLAYSESRAEQEGVGWYRTGSDACYFKNQLTRAGLKPFWTLTFTVQTSFDQDTLYLAHCFPYRYSDLQQYLSKIEASPLGVCSAIRRRRLCETLAGNECDLLTISTPGGDHANKKGIVISARVHPGETNASWMMKGVLDYLSSDCHCAVALRDKFIFKIVPMLNPDGVIVGNYRCSLAGGDLNRQYDNPKRELFPEVLHLKQMISNFGIGKEVLLYVDLHGHSKKSNIFMYGVENPTDEALYMRERIIPTLLDQASPLFNFADCTFDIGKGKEGCGRVVVRKQLGIVNAYTMEASFMGADQGEFQGIHFHQGHYEAMGHSLCEVLLDLVDTDQRKVEGIVRRYREKFPIDQSRVVSKRDDYGHGDSSXXXXXXXXXXXXXXXXXXXXXXXXXHRQVTRPSSSKPSTPTGRESGAGVTGKSRPGSRPASSSAEKNGTLRENGCGKKD---------------EGKGGTPRGALGKSKSVAEQGTPPTVTKTAVPPKITPTPVARHSSAVAPTPQKSTPSAKATKPDTPKGSSKAAGEGTAXXXXXXXXXXXXXXXXKTGGPAKATAAASSAGSXXXXXAKEKVATAGNAX---------KERGKTA----SSSPRVSAVTTVARGESPKLAAPGRSKSISAGGGGT--KRSKIAGVPPLALARRXXXXXXSDKKGSTRNSSSVGTKGKPKGVPSVGTTPPPPRRPASSPGSRSVASPRRRATSRV--------DPPKRSPSAPAKTTGPKRAETSSNATSTRSVGATGVGGKGKGKVKGTAGGXGKAAPGGTKKGDKKEALPLPPLRSKSPSAAKQAAS 866
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A7S2L088_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2L088_9DINO)

HSP 1 Score: 466 bits (1198), Expect = 3.900e-146
Identity = 258/539 (47.87%), Postives = 340/539 (63.08%), Query Frame = 2 
Query:  209 PPQTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPRTGYTDARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRA--GLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITS----PGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFPID-QSRVVSKQDDYG 1804
            PP+TG S+P +  PP  ++  P   EP+  +P  E+L    +K +A  R   P + R   VYDS+   P  G     GA+  E+   +Y P+GPDD T+VFESRFESGNLR A ++ E EY+L L+ D NT  HTQW+ FR+ N R+G  Y+ N+ N++K  +VYN GM+PL YS +RA   GVGW R G    Y++N   R   G   ++TLTF V   + QD +Y +HC+PY YTDLQR L ELE  P  +    RRR LCETLAGNACDL+TITS    P      +K +VI+ARVHPGE+NASW+MKG+LD+L      A  LRD FVFKIVP+LNPDGVI+GN RCSLAG DLNR ++ P R+++P +   K MI +    +EV+L++D+HGHS+K N+FMYG      D   +RE++ P LL  +S  F+  DC F + + KE   RVV  R+L IVNA+T+EASF GAD G     HF   H E MG+ LC  +LD  D DQ KV  +V++L+  +P D  S  VS  +D G
Sbjct:   79 PPRTGISVPMLPTPPNFIRAVPKEPEPLYAAP--ETLFDDIVKQEA-DRISRPEQVRNRVVYDSVESRPLQG-----GASGAEEPSPYYSPSGPDDTTLVFESRFESGNLRRAVQVYEFEYDLVLSPDYNTKSHTQWYLFRVGNTRRGPAYRFNILNMVKPTSVYNEGMRPLEYSTIRAAANGVGWVRCGEHIAYYQNGVRRREKGSTTYYTLTFTVTFQYDQDEVYFSHCYPYSYTDLQRDLRELEQDP-NMCRRFRRRKLCETLAGNACDLITITSFCSDPAALRA-RKAVVITARVHPGESNASWVMKGMLDYLTGASLDARILRDNFVFKIVPMLNPDGVIIGNYRCSLAGQDLNRLWDDPSRKMHPTIFFAKSMIRHLLNDREVILYIDIHGHSRKKNVFMYG----NTDGNSVREKIFPGLLCRSSDCFSFDDCCFKVQRSKESTARVVAYRELAIVNAFTLEASFCGADFGPLADRHFTTKHLEEMGYMLCDAILDFCDPDQTKVMQVVRELQLIYPDDGNSDDVSDSEDDG 603
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A7S0TYR6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TYR6_HEMAN)

HSP 1 Score: 461 bits (1186), Expect = 2.040e-143
Identity = 250/524 (47.71%), Postives = 337/524 (64.31%), Query Frame = 2 
Query:  200 EETPPQTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPRTGYTDARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITSPGG---CHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFP 1762
            E   P++GT     WPPP H    PPF E  L +   E +++ ++ L    R   PS      V+DSI   P +    ++G    + + +++  +GP+DDT++FESRFESGNLR A +I  SEY+L L  DINT  HTQW+YF +SN+R+GR YK N+ NL+K ++VYN G++PL YS+      G+GW+RTG D  Y++N   R G   ++TLTF V      DT YLAHC+PY YTDLQ YL  LE  P  V+  IRRR LC+TLAGN CDLLT+TS          +KGI+I+ARVHPGET ASWM+KG +D+L      A  LRD FVFKIVP+LNPDGVI GN RCSL+G DLNRQ+  P R ++P +   K M+  F+  +EV+++ DLHGHS+K NIF+YG +N   D L  +ERV P LL + S  F+  DC F + + KE  GRVVV R+ GI+N++T+EASF GA+ G   G+H     +++MGHS C ++LD  D DQ K + I+++L   +P
Sbjct:  130 ESEQPKSGTGYSLSWPPPFHTSAMPPFPE--LLNDLKEGIVS-QLALHDQRRLTFPSAVHNRVVFDSIEPNPAS---KSKGKDAAQPVKQYWELSGPEDDTLIFESRFESGNLRRAIQIYPSEYDLILRPDINTRGHTQWYYFSVSNVRRGRKYKFNLINLVKPDSVYNQGLRPLIYSEAEQSASGLGWHRTGVDIAYYQNNIKRKG-GAYYTLTFTVTFPHDNDTCYLAHCYPYTYTDLQNYLASLEADPR-VASRIRRRVLCKTLAGNNCDLLTVTSFSSDPEAMKSRKGILITARVHPGETQASWMLKGFVDYLTGPTLDAKILRDNFVFKIVPMLNPDGVINGNYRCSLSGQDLNRQWLDPSRTVHPTIYYTKMMLKRFAEDREVVMYSDLHGHSRKKNIFVYGCDNKQGDRL--KERVFPRLLWKNSESFSFSDCNFKVQRCKESTGRVVVWREFGIINSFTLEASFAGANFGVKSGLHMTVDDFQSMGHSFCDSILDYFDPDQIKTDAILRELVVLYP 643
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A078AT47_STYLE (Zinc carboxypeptidase family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AT47_STYLE)

HSP 1 Score: 439 bits (1128), Expect = 3.870e-135
Identity = 230/512 (44.92%), Postives = 325/512 (63.48%), Query Frame = 2 
Query:  260 LQTPPPFQ-------EPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPRTGYTD-ARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTIT---SPGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFP 1762
            ++T PPF        EP+ P  P E +L   ++ +A     + +    V VYD I+  P       A   T D + P++Y P+  DD T+VFESRFESGNLR A ++ E EY+L L  D NT  +TQW+YFR++N R G+ Y+ N+ NLMK +++YN GM+P+ YS+  A++ G GWYR G D CY++N   R     ++TLTF ++ +   DT+YLAHC+PY YTDL RYL  LE+     +  +RRRTLC+T+AGN C+++ +T   S       +KG+V+S+RVHPGE+ ASWMMKGV+D+L      A  LRD FVFKIVP+LNPDGVI G+ RC+LAG DLNR +  P R+++P +   K MI      +++ LF D HGHS+K NIFMYG     +D L  +E++ P L+ +   +FN  DC F + K KE   RVV+ ++LGI N++T+EASF GADQG+F   HF+    + +GH  C T+LD  D DQ KV+ ++++L+   P
Sbjct:  103 IKTNPPFHIKDAVDFEPLYP--PQEFILEESLRREAERVAHQENLMNRV-VYDCIDPSPYNASNPLADQQTPDGEFPQFYTPSSQDDYTLVFESRFESGNLRRAIQVYEFEYDLILKPDYNTRGYTQWYYFRINNTRAGKTYRFNIINLMKPDSLYNHGMRPVVYSEYEAKRNGRGWYRGGGDICYYQNSMKRKNAGYYYTLTFSIQFEHDNDTVYLAHCYPYTYTDLTRYLNHLESDNKRKN-RMRRRTLCQTIAGNNCEMIIVTTFQSDPEAIKNRKGVVLSSRVHPGESGASWMMKGVIDYLTGPSLNAKILRDNFVFKIVPMLNPDGVINGSSRCNLAGVDLNRCWIDPSRKIHPTIYHTKMMIKKLQEDRDIFLFCDFHGHSRKKNIFMYGNSGRVNDRL--KEKIFPCLVDKNCDIFNFSDCNFAVQKAKESTARVVMWKELGITNSFTLEASFCGADQGKFADYHFNTDLLQEVGHRFCDTILDFCDPDQVKVKAVLEELEIMLP 608
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A812TA97_SYMPI (AGBL3 protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812TA97_SYMPI)

HSP 1 Score: 437 bits (1125), Expect = 1.220e-134
Identity = 237/504 (47.02%), Postives = 314/504 (62.30%), Query Frame = 2 
Query:  308 PESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPR-----------TGYTDARGATRDED---MPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITSPGG---CHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFPID 1768
            PESL    ++ +A  R   P   R   VYDS+  P +           T   D RG T       +  +Y PTGP+D T+VFESRFESGNLR A +  E EY+L L  D NT  HTQW++FR+ N RKG  Y+ N+ N++K  +VYN GM+PL YS + A  +G+GW R G    Y++N   R     ++TLTF V  +   D +Y +HC+PY YTDLQ  L  LE  P  V   +RRR LC+TLAGNACDL+TITS  G       ++ +VI+ARVHPGE+NASW+MKG+LD+L      A  LRD FVFKIVP+LNPDGVIVGN RCSLAG DLNR +++P R+++P +   K M  +    ++V+L+VD+HGHS+K N+FMYG      ++  +RE++ P LL  +S  F+  DC F I K KE   RVV  ++LG+VN+YT+EASF GAD G     HF   H E MG+ +C  +LD  D DQGKV  + ++L+  FP D
Sbjct:   23 PESLFDDIVRAEA-DRISRPENVRNRIVYDSVGDPNQIEPTAFVPAISTSAQDPRGTTPSGPALLVTPYYTPTGPEDRTLVFESRFESGNLRRAVQAYEFEYDLILNPDYNTKSHTQWYFFRVGNTRKGPEYRFNILNMVKPTSVYNEGMRPLRYSSIDAATKGIGWARCGDRIAYYQNGLRRQKGANYYTLTFTVTFEHDCDEVYFSHCYPYTYTDLQLDLRALEKDPNMVR-RLRRRKLCDTLAGNACDLITITSFCGDPAALKARRAVVITARVHPGESNASWVMKGILDYLTGASVDARILRDNFVFKIVPMLNPDGVIVGNYRCSLAGQDLNRLWDEPSRKMHPTIFFTKSMFRHLLDDRDVILYVDIHGHSRKKNVFMYG----NSESNGLREKIFPGLLCRSSDCFSFDDCCFKIQKSKESTARVVAYKELGVVNSYTLEASFCGADFGPLGEQHFTTRHLEEMGYMVCDAILDFCDPDQGKVMLVCKELQGLFPDD 520
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: J9HN77_9SPIT (Zinc carboxypeptidase family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HN77_9SPIT)

HSP 1 Score: 433 bits (1114), Expect = 3.850e-133
Identity = 232/524 (44.27%), Postives = 329/524 (62.79%), Query Frame = 2 
Query:  209 PPQTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPRTG---YTDARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTIT---SPGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFP 1762
            P +TGT+      PP H++    F EP+ P  P E +L   ++ +A     + +    V VYD I+  P  G    +D   A  D +  ++Y P+  DD T+VFESRFESGNLR A ++ E EY+L L  D NT  +TQW+YFR+ N R G+ Y+ N+ NLMK +++YN GM+P+ YS+  A + G GWYR G D CY++N   R     ++TLTF  + +   DT++LAHC+PY YTDL RYL  LE+     +  +RRRTLC+T+AGN C+++ +T   S       +KG+VIS+RVHPGE+ ASWMMKGV+D+L      A  LRD FVFKIVP+LNPDGVI G+ RC+LAG DLNR +  P R+++P +   K M+      +++ LF D HGHS+K N+FMYG     +D L  +E++ P L+ +   +FN  DC F + K KE   RVV+ ++LGI N++T+EASF GADQG+F   HF+    + +GH  C T+LD  D DQ KV+ ++++L+   P
Sbjct:  100 PIKTGTTTQLTRNPPYHIKDAVDF-EPLYP--PQEFILEESLRREAERVAHQENLMNRV-VYDCIDPSPYQGNNPLSDQLNA--DGEFSQFYTPSSSDDYTLVFESRFESGNLRRAIQVYEFEYDLILKPDYNTRGYTQWYYFRVKNTRAGKTYRFNIINLMKPDSLYNHGMRPVLYSETEARKNGRGWYRGGGDICYYQNSMKRKNAGYYYTLTFSTQFEHDNDTVFLAHCYPYTYTDLTRYLNHLESDNKRKN-RMRRRTLCQTIAGNNCEMIIVTTFQSDPEAIKNRKGVVISSRVHPGESGASWMMKGVIDYLTGPSLNAKILRDNFVFKIVPMLNPDGVINGSSRCNLAGVDLNRFWIDPSRKIHPTIYHTKMMLKKLQEDRDIFLFCDFHGHSRKKNVFMYGNSGRVNDRL--KEKIFPCLVDKNCDIFNFSDCNFAVQKAKESTARVVMWKELGITNSFTLEASFCGADQGKFADYHFNTDLLQEVGHRFCDTILDFCDPDQVKVKSVLEELEIMLP 614
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A812SHK5_9DINO (AGBL3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SHK5_9DINO)

HSP 1 Score: 441 bits (1134), Expect = 1.090e-130
Identity = 252/542 (46.49%), Postives = 330/542 (60.89%), Query Frame = 2 
Query:  209 PPQTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRP-------------------PRTGYTDARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITSPGG---CHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFPID 1768
            PP+TG ++P +   P  ++  P  +E  L   PPESL    +K +A  R   P   R   VYDS+  P                   P  G +   G+      P +Y PTGPDD T+VFESRFESGNLR A +  E EY+L L  D NT  HTQW++FR+ N R+G  Y+ N+ N++K  +VYN GM+PL YS + A  +GVGW R G    Y++N   R     ++TLTF V  +   D +Y +HC+PY YTDLQ  L  LE  P  V    RRR LC+TLAGNACDL+TITS  G       ++ +VI+ARVHPGE+NASW+MKG+LD+L      A  LRD FVFKIVP+LNPDGVIVGN RCSLAG DLNR +++P R+++P +   K M  +    ++V+L+VD+HGHS+K N+FMYG  N  ++ L  RE++ P LL  +S  F+  DC F I K KE   RVV  R+LG+VN+YT+EASF GAD G     HF   H E MG+ LC  +LD  D DQGKV  + ++L+  FP D
Sbjct:  175 PPKTGIAIPMMAATPTFVRGVP--EEAELLYIPPESLFDDIVKAEA-DRISRPENVRNRIVYDSVGDPNQVEPCSFVPVSTGVPLQDPLGGTSGTSGSPLSFVTP-YYTPTGPDDRTLVFESRFESGNLRRAVQAYEFEYDLILNPDYNTKSHTQWYFFRVGNTRRGPEYRFNILNMVKPTSVYNEGMRPLRYSSIEAAAKGVGWARCGDRIAYYQNGLRRQKGANYYTLTFTVTFEHDCDEVYFSHCYPYTYTDLQLDLRALEKDPNMVR-RFRRRKLCDTLAGNACDLITITSFCGDPAALKARRAVVITARVHPGESNASWVMKGILDYLTGASVDARILRDNFVFKIVPMLNPDGVIVGNYRCSLAGQDLNRLWDEPSRKMHPTIFFTKSMFRHLLDDRDVILYVDIHGHSRKKNVFMYG--NSENNGL--REKIFPGLLCRSSDCFSFDDCCFKIQKSKESTARVVTYRELGVVNSYTLEASFCGADFGPLGEQHFTTRHLEEMGYMLCDAILDFCDPDQGKVMLVCKELQVLFPDD 707
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A8J6E1W5_9EUKA (Zinc carboxypeptidase n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E1W5_9EUKA)

HSP 1 Score: 430 bits (1106), Expect = 3.800e-130
Identity = 211/446 (47.31%), Postives = 294/446 (65.92%), Query Frame = 2 
Query:  455 EDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTI---TSPGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLKDKFPIDQSRVV 1783
            ED+  W++ TG DDDT++FESRFESGNL  A R+ ++EYNL+L  D NT  HTQW+YF + N ++    K N+ NL K +++YN GM+PL  S+ + +   +GW R   + CYF N   R G   ++TLTF        DT+Y AHC+PY  TDL  YL  LE +P  +   IRRR LC T++G+ C+ +TI   T+      +++G+VISARVHPGET +SWMMKGVLD+L +D   A  LRD FVFKI+P++NPDGV++GN RC+LAG DLNRQ+ +P   L+P V +LK  I  F+  ++V+LF DLHGHS+K NIFMYG  N  +  L ++ER+ P LL+  +P F+  DC+F + K K+   RVVV R L ++N++TMEASF G   G   G HF Q  +E MG  LC+++LD  D D  +V+ I Q+L  ++P++   V+
Sbjct:  289 EDLVPWWISTGDDDDTLLFESRFESGNLGQAFRVADNEYNLYLHADTNTKGHTQWYYFSVKNTKRDATVKFNIVNLAKPDSLYNYGMRPLVLSKQQMDGANIGWRRACRNVCYFANGVRRRGSSSYYTLTFTYDFKSDGDTVYFAHCYPYTRTDLTYYLDRLELNPR-IRQHIRRRALCRTISGDVCETVTISSFTNDPDALRKRRGLVISARVHPGETQSSWMMKGVLDYLTADTPDARLLRDNFVFKIIPMMNPDGVVLGNYRCNLAGNDLNRQWMRPDERLHPTVFNLKAAIERFTEARDVILFCDLHGHSRKKNIFMYGCNNSGNPDLRLKERIFPKLLNANAPSFSFEDCSFKVQKSKDSTARVVVWRALRVMNSFTMEASFCGPSYGRDDGFHFCQRTFEEMGSVLCESILDYCDPDTTRVDAIHQELSLQYPVEPDDVM 733
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A1R2CRS5_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CRS5_9CILI)

HSP 1 Score: 418 bits (1075), Expect = 2.160e-128
Identity = 222/515 (43.11%), Postives = 321/515 (62.33%), Query Frame = 2 
Query:  215 QTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLDALSRGEEPSKHRGVQVYDSINRPPRTGYTDARGATRDEDMPRWYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITS---PGGCHTEKKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLK 1750
            +TGTS+P +   PE ++    ++   +PS   E +L   ++ +      + +    + +YDSI+  P   ++         D+P +Y    P+D T+VFESRFESGNLR   +I E EY+L L  D NT  +TQW+YF +SN R G  Y++N+ N++K +++YN GM+P  YS++ AEQ   GW R G D CY++N   +     ++TLTF + T    DT+Y+AHC+PY YTDL +YL  L +     +  IRR+TLC+T+AGN+CD+LTIT+      C   +KG+V+ ARVHPGE+N+SWMMKG++DFL      A  +RD F+FKIVP+LNPDGVI GN RC LAG DLNR +  P  +++P +   K M+  F    EV+L  D+HGHS+K NIFMYG  +       ++E+V P LL   S +F+  DC F I K KE   R+V+ ++LG+VN+YT+E+SF GAD G+++  HF+  H +  G   C TLLD  D +Q KV  I ++L+
Sbjct:   51 KTGTSIPMLSFTPEFIEEVEEYESITVPS---EDILEESLRRECEKILSQDTLMNRL-IYDSIDPSP---FSQNENTPTTSDLPPFYPTPAPEDLTLVFESRFESGNLRRVIQIREKEYDLILKPDYNTRGNTQWYYFSISNTRAGFEYRMNIINMIKPDSLYNYGMKPCVYSKIEAEQCKRGWRREGLDICYYQNNIKKKAGGNYYTLTFTIVTKHDNDTVYIAHCYPYTYTDLCKYLNRLMSDSKKRN-KIRRKTLCQTIAGNSCDILTITNFTCDENCKN-RKGVVVFARVHPGESNSSWMMKGLIDFLTGPTLDAKIIRDNFIFKIVPMLNPDGVINGNYRCGLAGVDLNRCWTDPSPKIHPTIFYAKAMLKQFIEETEVVLVCDMHGHSRKKNIFMYGCTSRGT----VKEQVFPKLLETNSEIFSFADCDFGIQKSKEATARIVIYKELGVVNSYTIESSFCGADFGKYRDFHFNPLHLQEFGKDFCDTLLDFCDPNQNKVRSITEELE 552
[Close]
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Match: A0A1R2CW01_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CW01_9CILI)

HSP 1 Score: 417 bits (1072), Expect = 4.180e-128
Identity = 205/430 (47.67%), Postives = 286/430 (66.51%), Query Frame = 2 
Query:  470 WYVPTGPDDDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNLRKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACYFKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELENSPLGVSCAIRRRTLCETLAGNACDLLTITSPGGCHTE---KKGIVISARVHPGETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRCSLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKKSNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGCGRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTLLDLVDTDQGKVEGIVQKLK 1750
            +YVP   DD T+VFESRFESGNLR A ++ + EY+L L  D+NT  + QW+YF +SN RKG+ Y  N+ N++K  ++YN GM+P  YS+  A    +GW R G D CY++N   ++    ++TLTF + TD   DT+YLAHC+PY YTDL +YL  + ++P   +  IRR++LC+T++GN CDLLTIT+  G       +KGIV+ ARVHPGE N+SWMMKG++D+L      A  LRD F+FKI+P+LNPDGVI GN RC  AG DLNR +  P ++L+P +   K M+  F+   E++L  D HGHS+K NIFMYG    T +    RER+ P LL + S +F+  DC F + K KE   R+V+ ++LGI+N++TMEASF GA  G+    HF+Q H + +GH  C+ LLD    DQ KV+ I+++L+
Sbjct:  120 YYVPKNIDDTTLVFESRFESGNLRRAIQMYDYEYDLVLRTDLNTKGNMQWYYFSISNTRKGQKYIFNIINMLKPNSLYNFGMKPCVYSEKNAHIHHIGWVRNGQDICYYQNTIKKSPGACYFTLTFSLTTDHDNDTVYLAHCYPYTYTDLCKYLDTIVSNPKK-NHRIRRKSLCQTISGNTCDLLTITTFNGRVENLKYRKGIVLFARVHPGEPNSSWMMKGIIDYLIGPTLQAKILRDNFIFKIIPMLNPDGVICGNNRCGSAGVDLNRCWIDPSKKLHPTIYHAKAMVKQFAEENEIVLSCDFHGHSRKKNIFMYGCVGKTRN----RERIFPKLLEKISDVFSFNDCVFGLQKAKESTARIVIYKELGIINSFTMEASFCGASIGKHADFHFNQEHLQQLGHDFCEALLDFCSPDQSKVKVIMEELE 544
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ4_ECTSI1.980e-29660.62Flagellar/basal body protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2L088_9DINO3.900e-14647.87Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S0TYR6_HEMAN2.040e-14347.71Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A078AT47_STYLE3.870e-13544.92Zinc carboxypeptidase family protein n=1 Tax=Stylo... [more]
A0A812TA97_SYMPI1.220e-13447.02AGBL3 protein (Fragment) n=1 Tax=Symbiodinium pilo... [more]
J9HN77_9SPIT3.850e-13344.27Zinc carboxypeptidase family protein n=1 Tax=Oxytr... [more]
A0A812SHK5_9DINO1.090e-13046.49AGBL3 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A8J6E1W5_9EUKA3.800e-13047.31Zinc carboxypeptidase n=1 Tax=Carpediemonas membra... [more]
A0A1R2CRS5_9CILI2.160e-12843.11Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1R2CW01_9CILI4.180e-12847.67Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:179378..189245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score878.6
Seed ortholog evalue2.6e-252
Seed eggNOG ortholog2880.D8LKZ4
Preferred nameAGBL2
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0002164,GO:0003407,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0007005,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009791,GO:0009987,GO:0015630,GO:0016043,GO:0016787,GO:0018193,GO:0018200,GO:0019538,GO:0032501,GO:0032502,GO:0035608,GO:0035610,GO:0036064,GO:0036211,GO:0042995,GO:0043010,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0060041,GO:0070011,GO:0071704,GO:0071840,GO:0120025,GO:0120038,GO:0140096,GO:1901564
EggNOG free text desc.protein deglutamylation
EggNOG OGsCOG2866@1,KOG3641@2759
Ec32 ortholog descriptionflagellar/basal body protein
Ec32 orthologEc-11_006110.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons13
Model size3961
Cds size2913
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930829.8090906-UTR-C-linearis_contig97:179377..1795701622930829.8090906-UTR-C-linearis_contig97:179377..179570Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 179378..179570 +
1690881271.3995883-UTR-C-linearis_contig97:179377..1795701690881271.3995883-UTR-C-linearis_contig97:179377..179570Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 179378..179570 +
1622930830.0664377-UTR-C-linearis_contig97:188390..1892451622930830.0664377-UTR-C-linearis_contig97:188390..189245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 188391..189245 +
1690881271.583945-UTR-C-linearis_contig97:188390..1892451690881271.583945-UTR-C-linearis_contig97:188390..189245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 188391..189245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930829.8281171-CDS-C-linearis_contig97:179570..1795961622930829.8281171-CDS-C-linearis_contig97:179570..179596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 179571..179596 +
1690881271.4110105-CDS-C-linearis_contig97:179570..1795961690881271.4110105-CDS-C-linearis_contig97:179570..179596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 179571..179596 +
1622930829.851097-CDS-C-linearis_contig97:181000..1811321622930829.851097-CDS-C-linearis_contig97:181000..181132Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181001..181132 +
1690881271.421444-CDS-C-linearis_contig97:181000..1811321690881271.421444-CDS-C-linearis_contig97:181000..181132Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181001..181132 +
1622930829.8694165-CDS-C-linearis_contig97:181385..1814641622930829.8694165-CDS-C-linearis_contig97:181385..181464Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181386..181464 +
1690881271.4306781-CDS-C-linearis_contig97:181385..1814641690881271.4306781-CDS-C-linearis_contig97:181385..181464Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181386..181464 +
1622930829.8871655-CDS-C-linearis_contig97:181768..1818931622930829.8871655-CDS-C-linearis_contig97:181768..181893Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181769..181893 +
1690881271.4455054-CDS-C-linearis_contig97:181768..1818931690881271.4455054-CDS-C-linearis_contig97:181768..181893Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 181769..181893 +
1622930829.9005556-CDS-C-linearis_contig97:182263..1824441622930829.9005556-CDS-C-linearis_contig97:182263..182444Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 182264..182444 +
1690881271.4626155-CDS-C-linearis_contig97:182263..1824441690881271.4626155-CDS-C-linearis_contig97:182263..182444Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 182264..182444 +
1622930829.9128304-CDS-C-linearis_contig97:182743..1829131622930829.9128304-CDS-C-linearis_contig97:182743..182913Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 182744..182913 +
1690881271.473702-CDS-C-linearis_contig97:182743..1829131690881271.473702-CDS-C-linearis_contig97:182743..182913Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 182744..182913 +
1622930829.930693-CDS-C-linearis_contig97:183089..1832661622930829.930693-CDS-C-linearis_contig97:183089..183266Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 183090..183266 +
1690881271.48362-CDS-C-linearis_contig97:183089..1832661690881271.48362-CDS-C-linearis_contig97:183089..183266Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 183090..183266 +
1622930829.9465144-CDS-C-linearis_contig97:184171..1843611622930829.9465144-CDS-C-linearis_contig97:184171..184361Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 184172..184361 +
1690881271.5022836-CDS-C-linearis_contig97:184171..1843611690881271.5022836-CDS-C-linearis_contig97:184171..184361Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 184172..184361 +
1622930829.9657178-CDS-C-linearis_contig97:184862..1849431622930829.9657178-CDS-C-linearis_contig97:184862..184943Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 184863..184943 +
1690881271.51441-CDS-C-linearis_contig97:184862..1849431690881271.51441-CDS-C-linearis_contig97:184862..184943Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 184863..184943 +
1622930829.9855042-CDS-C-linearis_contig97:185398..1855631622930829.9855042-CDS-C-linearis_contig97:185398..185563Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 185399..185563 +
1690881271.5303345-CDS-C-linearis_contig97:185398..1855631690881271.5303345-CDS-C-linearis_contig97:185398..185563Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 185399..185563 +
1622930830.0029268-CDS-C-linearis_contig97:185981..1860831622930830.0029268-CDS-C-linearis_contig97:185981..186083Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 185982..186083 +
1690881271.5405204-CDS-C-linearis_contig97:185981..1860831690881271.5405204-CDS-C-linearis_contig97:185981..186083Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 185982..186083 +
1622930830.0217218-CDS-C-linearis_contig97:186436..1865701622930830.0217218-CDS-C-linearis_contig97:186436..186570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 186437..186570 +
1690881271.551048-CDS-C-linearis_contig97:186436..1865701690881271.551048-CDS-C-linearis_contig97:186436..186570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 186437..186570 +
1622930830.0457377-CDS-C-linearis_contig97:187039..1883901622930830.0457377-CDS-C-linearis_contig97:187039..188390Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 187040..188390 +
1690881271.5656502-CDS-C-linearis_contig97:187039..1883901690881271.5656502-CDS-C-linearis_contig97:187039..188390Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 187040..188390 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17069.1prot_C-linearis_contig97.17069.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig97 179571..188390 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig97.17069.1

>prot_C-linearis_contig97.17069.1 ID=prot_C-linearis_contig97.17069.1|Name=mRNA_C-linearis_contig97.17069.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=971bp
MWEETPPQTGTSLPFIWPPPEHLQTPPPFQEPVLPSPPPESLLAREIKLD
ALSRGEEPSKHRGVQVYDSINRPPRTGYTDARGATRDEDMPRWYVPTGPD
DDTVVFESRFESGNLRSAERIDESEYNLHLAFDINTDRHTQWFYFRMSNL
RKGRPYKLNMQNLMKTEAVYNLGMQPLAYSQVRAEQEGVGWYRTGSDACY
FKNQDTRAGLKPFWTLTFVVKTDFQQDTLYLAHCFPYRYTDLQRYLWELE
NSPLGVSCAIRRRTLCETLAGNACDLLTITSPGGCHTEKKGIVISARVHP
GETNASWMMKGVLDFLGSDCHCAVALRDKFVFKIVPILNPDGVIVGNCRC
SLAGGDLNRQYEQPKRELYPEVMSLKQMIANFSIGKEVLLFVDLHGHSKK
SNIFMYGVENPTDDALYMRERVVPSLLHEASPLFNLGDCTFDIGKGKEGC
GRVVVRRQLGIVNAYTMEASFMGADQGEFQGVHFHQGHYEAMGHSLCQTL
LDLVDTDQGKVEGIVQKLKDKFPIDQSRVVSKQDDYGDRRNGGSSSTSSD
DSDSPSPRRQRHRLTPRPPSSKPSSPSARAVSRPSSSSAGRGRKAGQQRE
PARGTVVDGGSSGSGGGGGGGGGGGGGKNEEGKRQTPRSARSKSTLHAGG
SEHPTPAAPKAPPPRITTPVTNTRHASAAAPPSQKPSATKPSTPRSTLKA
AGGGNAAMKSASAKGGGSKTSAPRASSASSKPPGASKQKEKEREKEEKVP
ASGRAGAAGALPAGARKKGRAAPKPGSSTSAGASATTAVRGGSAKLAAGG
RKSVSGRSGGGTPVKALNAAAVPPLVLARVEGAGDTAPTNGSGKFKKTPK
KGVKAKGAPPVGPSAPAQRPKSSPASRSISSPRRAAAAAAAAAAAAAADA
PRRAPSAPSKTGATRADAGGSSASSRGGGTTGRGAKAKGGGRGNGKKEVL
PLPPLKSKVKKAAANISSGR*
back to top

mRNA from alignment at C-linearis_contig97:179378..189245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17069.1 ID=mRNA_C-linearis_contig97.17069.1|Name=mRNA_C-linearis_contig97.17069.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9868bp|location=Sequence derived from alignment at C-linearis_contig97:179378..189245+ (Chordaria linearis ClinC8C monoicous)
CGGAGTCTGCTCTGTTTCTCTTCTTCCTCCGCTCCTCCCTCTCCACTGGC
CAAGCTGACCAAGATAAGATGGTGTAGAGGTGGAATCCTTGAGGCTAGAC
ATGTATACGCGAAGGTGACACGGCGAGACGGAATGGGGTGGTGGCTGTGG
TGGGTCCGAGATTTGTTCCACAACGTCAACATAACCTAGTAGCATGTGGG
AAGAGACGCCGCCTCAAACGTGAGTGGGACTGCTTGTGCAGCAGGATCTA
TCCACGATCTGTTGGAATCCGTGTGTGTTACCCAGATAGTAGATGCGTGC
GGTTAACTTCGGTTGATCCGTTTGATCCGTCCCACTCGTCCTTTATTCGA
AAGCCGGGTCGTGTGGGCTCCAGGACTGCAGATTGCATATCTTTGGACTG
CGAACTGCGAACCCACACACATCACAAAAAAATGTGGAGTGATTGCAGCA
CCCTGCTCTGCTGCTGTAAGCTGTAGACCCGCAAGTGAGCGCAACAAACC
GCTGTGCGGTTTCCATCCTGAAACATGACTCATTTAAGTTGGTTATTTCT
TACTCATGGTACGCTTTCGTCCCGTCGAGCCAGACTACAGAGTTGGCAGG
GGCGCCTTGCCACGCGGGGCATCTTGCCAGAACATCTGAACCGTGGTCAC
ACAGAAGGCTCCTCTCCCTGAGGCCCCCACCCACCTTCTGCGGTGCTTGC
CTGGTAATTTTTAAAGCGAGAGAGTTTCAGCCGTCTCTCCCTCTAGTGTT
ACACACGATCTAAGCGCTTTCCACTGACAGGAGGAACAAAAGCGAGAGAA
AAAACTAATTTTGTGTGAAACCCATCAACCTGCATGCTAGATGTTACGGT
GAGACCACTAGACCACCGGGGCGACCGGCACTTTCATGGGTGCTTGAAAT
GCACAGGATTTACACGGCGGCACGTACTGCTTGCTGCATGTGGAGTACCT
CCACACATGATAATTTTCCATTCCCATCAAAATTCATACAGAGTAAAGTT
ATGCCAGCACCACTAACCCAGTTCGTACTCTGTGTAGAGACGCCCCGAGG
TTCTAGAGCAGCTGTACTACTTTACTACTGCTGTAGCGCAACCAAGCCGC
CAAAAGCGTTGGCTAGATCTACAAAAAAATGTTATCGGCCTACCAAACAT
CGCCATCGCCGTAACACCAAGTCCCACGATCACCCTTCGTAGACTGCTGC
AGATTTAGACTATACCACCGGGGAGATGATTCTCAGAGGGCTGCCAAGTT
CTTGAAACTCAATACGAAGTACTTCGTGTGGATTCAGTCAAAACTCTCCC
GAGAAATACTCTGTGAATTATATTCGTGCGCCCCCGGAGTTGGCATCACT
CGGCAACGGCACTGTACAGAACACGACCGTTGCGCCGTTAGCTACATACC
AGCAGGCACTTTGAATAAGCCCGCCGCTTCTTCTTTTTCTTTAGACCAAC
AGGAGAGCTTTGCTGATTGCAGCGCCAGGAACATCGACCACCAGTTGCCT
TTGCCCTTGCCCTTACCCTTACCCTCACGCTCGCCCTCACCCGTGCCACG
TACTGCTGTATCTGCGTTGGACAACGGGTGGCTGGTTCGGCCTGCATAAA
CTGCAATTCTGCCATGTATGCAGAGGGACGTCGCTTCCGTTCATCTGGCC
ACCTCCGGAACACCTGCAAACCCCTCCGCCCTTCCAAGAGCCGGTGCTTC
CCTCCCCGCCGCCTGAAAGTTTGTTGGCCAGAGAGATCAAGCTGGATGCA
CTCAGGTTTGCTGGTCTGGTTATTCGTTTCGAAACACAGAGTCTGCAGGC
AGCGTATCTGGGTACTGATGTGCGACGACAAACAGCAACGATCCAGTTTG
CTGCTACCTGATATGGTTTCGTTTTTTGTGACTGGCGGAGGGTCAACATC
TGTGCGTTATGGGGAGTGGTTCGCACACCTCCAGATAAATGTCAACGCGA
ATGGCGCATCATATGGCTTGACGTGCATTGCGCTCTGTGCGGCGTAACCT
GGTATCAGCAGGGGCGAAGAACCGAGCAAGCACCGAGGGGTGCAAGTGTA
CGACTCTATTAACAGGCCGCCGAGAACCGGCTATACGGTGAGAACCAGAC
CCAGTATCAGACTCACGCTGATACTGACACTGGCACTGACGCTGACGCTG
ATACTGACACTGACACTGACGCTGACGCTGACACTGACACTGACACTGAC
ACTGAGACATGCAAACGCCGGGAGGAAACAACTATCGTGTCACGGGCAAA
GATGGTGGTGATGGTGATGGTGATGGTGAAGGTTCGAGCATGAGGGGTAA
GGCTAAAAAAGTATCAACCGATGGCAGTTCGTCGCCACTAACACGCACGA
CACAACACAACATACTTGTACATATACTACCTCTCGCGCAGGACGCTCGA
GGAGCAACGCGGGACGAAGACATGCCCCGATGGTACGTGCCCACTGGTCC
AGACGATGACACGGTAGTGTTCGAGTCTCGCTTCGAGTCGGGTAATCTCA
GGAGCGCAGAGAGAATGTGAGTGGAAGACGATAAGAAGAGAAACCGGCGT
TTGCGAATAGCGTCGCAAAAGAGTGTGTGCGTGAGCCATGTAAGGAGGGT
TTGAGCTACTATCATAGTAGCAACACGTGGCGGTGTTTCAATTTGGAAGA
GGATGCGATCTAAGCCGAGAGATCGCCGAGAAAGTGCGGCACGACAAGCA
TGGTTGTGTCAAACGTATTCTGTCATGTGGCCCTTTATTCGTGCTAAGTT
CCAAGCAGGTGCTTAGGAGCCGAGGCGGGCAAGATAACGGAAAAGACGCG
AGTGCTGGTGCCTGCTCGCGGGTTGGATTAGAGACTCATCACTGACACCC
TTCATTCCCTATTATATTCCCATGCTTGTCTGCCAGAGACGAGTCAGAGT
ACAACCTCCACCTGGCGTTCGACATCAACACCGACAGACACACGCAGTGG
TTCTACTTCCGGATGTCCAATCTTCGAAAGGGCCGACCGTACAAGCTCAA
CATGCAGAACCTGATGAAGACGGAGGCGGTGTACAACCTTGGGATGCAGC
CGCTTGCCTACTCGCAGGTAAGGCCTACAGCAGTGCTCTTTCAATCCCCC
CCGTTTACCACACCGTGTTGCCACATCTTGGGTTGCTTCATCTCGAGGCT
ACTTGTCGCACAACAACAACAACAACAACAACAACGACAACAACTCGCAC
GTAAACTACAGCAGACAAGCGATTTCAAACAGAGGAGTAGTCTAGTTCTG
ACGCAATTATGCTTTTGGACAATTCATATCTACCCATATCAAATTTCGAT
TCGACCCTGCTGTACTGTCTGTAGTTCAGATACGACGTGCCATGATGTTG
ACGTACGTGCTTGTAGGTGAGGGCGGAGCAAGAAGGTGTGGGATGGTACC
GAACTGGATCGGACGCGTGTTACTTCAAGAACCAGGATACAAGAGCAGGC
CTGAAGCCGTTTTGGACCCTGACGTTCGTTGTGAAGACAGACTTCCAACA
GGACACGCTTTACCTGGCGCACTGCTTCCCCTACAGGTACCTCTAGTTGT
TGCTGCCGCAGCCCAAGGTTGGAACCAATAGTCAATTGTTGTACCAACCA
ATACCCAAACCACCCCAACGTTCCCGATTCAACATCTCGATCGACCAGAG
ACTCCAAACATGCTCTAAAACGTACCGTTCATATCCCCTACCCTGATCCA
TGGACGTTATAGATACACGGACCTGCAGCGTTACTTGTGGGAGCTGGAAA
ACTCGCCGCTAGGTGTTAGCTGCGCCATTAGAAGGAGGACCCTTTGCGAG
ACCCTTGCCGGCAACGCGTGCGACCTGCTCACCATCACATCGCCGGGGGG
TTGCCACACGGAAAAGAAAGGCATCGTTATCTCGGCCAGGTGATCGATCG
ACCCAACCAGCCGATCGTCCGCAGCCCCTATCCTGGAACTACTGTAGACT
CCGCGGCTCCCGATTAAATAATGTTCACTCATTTAGCACACTTTTTGAGT
ACGCTCCAAGCGATTCCCATGTTTCCATGGCACATTTCAATCCGCATATC
ATACGTTTGCTCAGTTTTCGTGTACAATTCCGAAGACCATAAGTCCTTTA
AAATCATTTCCCACCATGTTTTTTCTGCGAGAGTGGTCGATGCTCGACAA
GGTAGCAGCCTAGTGATGGTTGGATGGATAGATGAATCGATTGCAACCGA
GAGGCAAGACGTAACCTTTAATCGTTGCATTGAAGTGTAGTTCCAGTGGG
TCCCTCAGGGCCCCCATGTGTTGTCGAGCATGACGACTGAGAGGGGCGAG
GTGCGTGTCGATCGAGTGTCTCTAGACTGGCATGTTACAGGTACCATGTT
ACAGGGATCGAGCCCGATTTTGATTTCCAGGAGAATTTACACTCTTGATG
CCTGTCCACGGAATGTTCGAACCGTCCTGGGATTTTGTGGCCGAACATCC
GTCTCACCGATTCCCCGATCATGCCCCGATCATCACAAACTGGTGAATCC
ACCACAAGTGCTAGTAGCAGAAGTAGTAGTGGTAGTGGAGACAATGGCTG
ACCTCATACAGTATTGGTATATACGGCAGTTTAGTACGTTGCTCCCACAC
AAAACAATACAACAGCATGATGCGTTTGCAGAGAAGGAGAAGGAGAAGGA
ATGTTGATGTCAACGCCGATGCCATGATTTCTTGAGGTTTGACCCCAACC
TCTGCGTTGTATTCCTCTCTCCCTGCCTGCCTTCTTCTCTCTCTCTCTCT
CTCTCTCTCTCTCGCTCCCTTTCCCTCTCCCTCTCCCTCTCCAGAGTGCA
CCCCGGCGAGACAAACGCCTCCTGGATGATGAAGGGCGTCTTGGACTTCC
TCGGCTCGGACTGTCATTGTGCCGTCGCCTTGAGAGATAAGTTCGTCTTC
AAGATCGTTCCGATACTCAACCCCGACGGCGTGATCGTAGGGAACTGCCG
CTGTTCCCTGGCCGGGGGCGACCTCAATCGTCAGGTTAGATCATGTGATG
AGACGCAATTTCATTCGCTGGACCGTTCCAGCTTTGGTCGTATTTGTTTG
AGAGAAAGGGTTTGAAAGTATAGAGTTGGGACGTGTGGCATGTAGGCATT
CCTGCTGGTACCAGCATTCTGGTCTGCTCTTAACTGGGCAGACAAAATCC
GAAGTGTTGGCACCGCTACGCATGCTGTTGAGGCTGTTCGCGTTCGTTCG
CGCGCTGAGCCTGAGGCCCGTGCGTGTTGAACCTCGTTGGTACCTCGACG
TTGAATCGGTACAATGTTAATGTTGCGGTAACTTACACTGGTCGATAGTG
TGGTGCTGGCTGTGCCGATCCGGCTAAATCGTGCGGCTATTGCCCCAACT
GACGGCTGAGATTGCCTTAACTTGTCATACAACCCCTCATCGCTGTGTCG
GGCCGACTTTCTTTGCGGCGCACCATGTATGGGGGAACCTGTTTCTGTCC
GTTTGCTGGTGATGAATGGCATTGCATTGATTCAGTACGAGCAACCGAAA
CGGGAGCTCTATCCGGAGGTGATGAGCCTCAAGCAGATGATCGCCAATTT
CAGCATTGGCAAAGAGGTGAGGCAGAGACGGGTGGACAGGCAGGCAGACA
GACAACAGGCAGGCAGACAAGCAGACAAGCAGACAAGCAGACAGGCAGGC
GCGAAGCGGGTAGAGAGACCACCTACACGGAAATCGATAGTCGGCTGCCT
CAGCACGGTACAGTAGAGTTTAAAATCTTCGTTACGCTTCGAACGCAGCA
GTGGCACGTTTCCGCCTTGCGCAACAACCTTCAGTTTTTTTCGTTTGAAA
GCAGTGTATCATTGATCTATCGGTTCCAGTTTATGATGTGAAATGCCGGC
TTGTGTCGAATGCCTCGCTGTACTTAAGTACTGCGCTCTTCTTCTACGAC
GAAGGTTGACTCTAGCAGTGCCACGGCCACTACTATAGAGTAACAGTGCC
ACTACTATAGAGTAACAGCAGTGCTGCTACCATCGCGATACTTTCGTTCG
CTTGCTCCGTCCGGCTGACAGGTGCTGCTATTCGTCGACCTGCACGGCCA
CTCCAAGAAGAGCAATATCTTCATGTACGGCGTCGAAAACCCGACCGACG
ACGCGTTGTACATGCGGGAGAGAGTCGTCCCAAGCCTGCTTCATGAAGCG
AGTCCCCTGTTCAACCTGGGAGACTGCACCTTCGATGTACGTACGGACGT
AGGTAAATCGGTAGGGCTGCAACAGTTTTGCTCGTGGCACAACTGCTACA
GGTTGCTTGCCCCCGCTTGCCGGCCTTGTTCGCCTTGTTTTGTGGAGTCA
GGTAAAAAGGCGTTTATGTCTTGAATGTCTTGAATGTCTTGAATGCCTTG
AGTGTCTTGAATGTTGCTCTTTTTGTTTTGCTGTTGTGTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTTTTGTTGTTGTTGTTGGTTGTGTGATGGTTG
CCGTTGCGACCTCGAGTGTGTGGGTCTAGTGCTCCATGGTGTTGCAATTG
GCGAATCTATTGTGCCTGTGCCTTGGTCTCCTCTCTCCCTCTCTCTCTAC
GGCGGTGCCTGACGGAACCGGCGTTTTTTCTCCTCTCTTCGTCGTTGCTG
TCAGATCGGCAAGGGTAAAGAAGGGTGTGGCAGAGTGGTGGTGAGAAGGC
AGCTCGGCATCGTGAACGCGTACACAATGGAGGCAAGCTTTATGGGAGCA
GACCAGGTGAGGCACGGAACACGGAGGTCTTGGAAATTGAAAGCGTTGTA
CGAAGCATTTGTACATTTCCCCGGCAGAAGGCCCTGGCAGAGCAGACTCT
TCGAAGGAGCTGCGCATCTTCTACTTAAAGCATGTTTGCAGCGAGGCTGC
AGCAGTCGTAGGATCCAACGCTACGCTACCCTTTCCAACCTTGTCCTATC
TTTCAGGCTTGGCCGTCAGAGACGGTAGTAACAATTGGCTGCTCGACGGC
GTAGTGGTGTTTCCTGGTATATGTACTCCTATGTTTGTCTGTTCTTGGCT
TATTGAAGGCTTGGGTAGCCCATGCGGAGTTGCTTTTGCGTGTGTTGTTG
TGTGTGCAGGGTGAATTTCAGGGCGTCCACTTCCACCAGGGACACTACGA
GGCCATGGGACACTCTCTCTGCCAAACATTGTTGGATCTGGTCGACACCG
ACCAGGGCAAGGTCGAGGGCATCGTCCAAAAGCTCAAGGACAAGTGAGCT
AAATATTGTGTTGGTGTCACAGGTTCTGTTCCATACACCACGAGTGGTGA
ACATAACAAGATAACCCATCGTAATTGCCAAGTTTCGCTGTTGTTGTGTG
CGCTGCAATACCCTCGCAGAAACCGCGAAACTAAGCTCCTGAAGTCGGCT
CGAATCACGCCTACACCAAAAGACGGGGATGAATTCCAGTCGAGATTCGG
GTTCTTGCCTTGCCGAAAGGGGTCGATGCTTTCAAAAGCATGTTCAACGA
CATGTTCACCATATTCAATGTTGACGTTGTAACGGATTCCTCGTCAACAT
GTCCGCGTTTGGTCGATAAATTTACCAATGAGCGTTCCCTACGATGTCGT
CCGTCAATGCCTTGTGCGCAACTGCCTTGCTGTCTGTCCCATCAAACAGC
GTGTCCACCGTTTTCATATGTTCCCACTACTTTGATGAACTATCATATTC
CAACGGCGCCAGGTTCCCGATCGACCAGTCACGAGTGGTTTCGAAGCAAG
ATGACTACGGTGATCGCCGCAACGGCGGCAGCTCGAGCACTTCCTCCGAC
GACTCCGACAGCCCCAGCCCCCGCCGCCAGCGTCACCGTCTTACCCCTCG
GCCGCCATCTTCCAAGCCGTCTTCTCCTTCCGCCCGAGCCGTTTCCCGCC
CTTCTTCATCTTCGGCAGGGAGAGGGAGGAAGGCCGGACAGCAAAGAGAG
CCGGCAAGAGGCACTGTGGTTGACGGTGGCAGCTCTGGCAGCGGCGGCGG
CGGCGGCGGCGGCGGCGGTGGTGGTGGTGGCAAAAACGAAGAGGGCAAGC
GGCAAACTCCCAGGAGCGCAAGGAGCAAAAGCACCCTACACGCTGGTGGC
TCCGAGCACCCTACGCCAGCGGCACCAAAGGCGCCGCCGCCAAGAATCAC
GACCCCCGTAACCAACACCCGGCATGCTAGTGCCGCCGCTCCCCCGTCGC
AGAAACCTTCGGCGACAAAGCCGTCCACCCCTAGGAGTACGTTAAAGGCT
GCCGGCGGAGGGAACGCTGCGATGAAAAGCGCCTCCGCTAAAGGTGGCGG
ATCGAAAACCTCCGCGCCAAGAGCGTCCTCCGCGAGCAGTAAACCCCCCG
GCGCCTCCAAGCAGAAAGAAAAAGAGAGAGAGAAAGAGGAGAAGGTTCCC
GCTTCCGGCAGAGCCGGCGCCGCGGGCGCTCTTCCAGCTGGTGCTCGAAA
GAAAGGCAGAGCCGCACCCAAACCTGGATCGAGTACCTCAGCGGGGGCTA
GCGCCACAACTGCAGTTCGGGGAGGAAGCGCAAAGCTCGCGGCAGGCGGT
AGGAAATCGGTCTCGGGGCGGAGCGGCGGGGGTACACCCGTCAAGGCCTT
GAATGCCGCTGCGGTGCCCCCTCTTGTCCTCGCCCGGGTAGAGGGTGCCG
GCGACACGGCTCCCACCAACGGCAGCGGAAAATTTAAGAAAACTCCCAAG
AAGGGCGTCAAGGCGAAGGGTGCTCCGCCCGTGGGTCCGTCTGCCCCCGC
TCAAAGGCCAAAGTCGTCGCCCGCTTCGAGATCGATTTCTAGCCCCCGGC
GTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTGCTGCTGCGGATGCC
CCTCGAAGGGCTCCCTCCGCGCCCTCAAAGACGGGGGCGACGCGAGCAGA
TGCGGGTGGCAGTAGTGCGAGCAGTCGTGGTGGCGGCACGACGGGAAGAG
GGGCTAAGGCGAAAGGGGGAGGGCGTGGGAACGGGAAGAAGGAGGTCCTG
CCGCTGCCGCCGCTCAAGTCCAAGGTGAAGAAAGCTGCCGCGAATATTTC
TTCCGGAAGATAGACAGGGCTCGCTTGGTGTGCAGGAGTTGCTTGTCGGG
CCGGCAGAGAGTCGATTATTGCTATTGCTATTGCTACTGCGACTGAAAAT
AAGTTGCAGGCTTGTTTTCTGGCGAATTCGGGCGTTGCTTTGTGATGTTT
GGTGTCTTTGCCTACCCTGCTTTTTTCCTCCTCGCGTTCGACTTCCTAGT
TTTGTAGTGTTTGACGTCTGATATAGATGCGTGTACGCGTGCTTTTTCCT
CTGCGTTAGACTCCGTAGTTCCGCACCTTTGCTTCATGCTGCGGTATATG
GGCTTTAGTTTCCGATATCTGACCATAGATCCATAGATGATAGAGGAGAA
TTTCGTGCTACGCCATGCTCCACATCGACCCGAGAGCAAGAAGCAATTGG
CTTTGCGGTAATTCCGTAAATTTAGCGCGCAGGAGACCGCGCCAGTTTCT
TTTTCGCGTGTTGTGCGGTGTGGGGTGTTGTATACGGCATCTTGATGCCC
ACATCGCACGTGATATTTTGAAGGGTGTGTCATGTATCACCGTGCGTGTG
GCGAGTATATAGTAGAAGAGCCGCTGATGACCAGTAGTAATTTAACCATA
TCCGCACCGCCACGAGTCTGGGGAAGTCGTGCAAGCGGACGGGCAAGGGT
ATTTGTGACAAAACGATCAAACGTAAGATACCGGCCTGAGGTTGAAACTG
GAGGACTTCGCGCAGCACCCAGGGATGAAAATTTGAACCGCAGCCATTTC
ACTGGCGTTATGTGTTTCGAAGATCGTTCAACCGCTCACCGCGGCTGAAA
ATAGAAAAAAGAATCAGGAATGTCACTTTTCACACATATGTACGTGCACG
AAAAAGAAGGGAGTGGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig97:179378..189245+

>mRNA_C-linearis_contig97.17069.1 ID=mRNA_C-linearis_contig97.17069.1|Name=mRNA_C-linearis_contig97.17069.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5826bp|location=Sequence derived from alignment at C-linearis_contig97:179378..189245+ (Chordaria linearis ClinC8C monoicous)
ATGTGGGAAGAGACGCCGCCTCAAACATGTGGGAAGAGACGCCGCCTCAA
ACAGGGACGTCGCTTCCGTTCATCTGGCCACCTCCGGAACACCTGCAAAC
CCCTCCGCCCTTCCAAGAGCCGGTGCTTCCCTCCCCGCCGCCTGAAAGTT
TGTTGGCCAGAGAGATCAAGCTGGATGCACTCAGAGGGACGTCGCTTCCG
TTCATCTGGCCACCTCCGGAACACCTGCAAACCCCTCCGCCCTTCCAAGA
GCCGGTGCTTCCCTCCCCGCCGCCTGAAAGTTTGTTGGCCAGAGAGATCA
AGCTGGATGCACTCAGCAGGGGCGAAGAACCGAGCAAGCACCGAGGGGTG
CAAGTGTACGACTCTATTAACAGGCCGCCGAGAACCGGCTATACGCAGGG
GCGAAGAACCGAGCAAGCACCGAGGGGTGCAAGTGTACGACTCTATTAAC
AGGCCGCCGAGAACCGGCTATACGGACGCTCGAGGAGCAACGCGGGACGA
AGACATGCCCCGATGGTACGTGCCCACTGGTCCAGACGATGACACGGTAG
TGTTCGAGTCTCGCTTCGAGTCGGGTAATCTCAGGAGCGCAGAGAGAATG
ACGCTCGAGGAGCAACGCGGGACGAAGACATGCCCCGATGGTACGTGCCC
ACTGGTCCAGACGATGACACGGTAGTGTTCGAGTCTCGCTTCGAGTCGGG
TAATCTCAGGAGCGCAGAGAGAATAGACGAGTCAGAGTACAACCTCCACC
TGGCGTTCGACATCAACACCGACAGACACACGCAGTGGTTCTACTTCCGG
ATGTCCAATCTTCGAAAGGGCCGACCGTACAAGCTCAACATGCAGAACCT
GATGAAGACGGAGGCGGTGTACAACCTTGGGATGCAGCCGCTTGCCTACT
CGCAGAGACGAGTCAGAGTACAACCTCCACCTGGCGTTCGACATCAACAC
CGACAGACACACGCAGTGGTTCTACTTCCGGATGTCCAATCTTCGAAAGG
GCCGACCGTACAAGCTCAACATGCAGAACCTGATGAAGACGGAGGCGGTG
TACAACCTTGGGATGCAGCCGCTTGCCTACTCGCAGGTGAGGGCGGAGCA
AGAAGGTGTGGGATGGTACCGAACTGGATCGGACGCGTGTTACTTCAAGA
ACCAGGATACAAGAGCAGGCCTGAAGCCGTTTTGGACCCTGACGTTCGTT
GTGAAGACAGACTTCCAACAGGACACGCTTTACCTGGCGCACTGCTTCCC
CTACAGGTGAGGGCGGAGCAAGAAGGTGTGGGATGGTACCGAACTGGATC
GGACGCGTGTTACTTCAAGAACCAGGATACAAGAGCAGGCCTGAAGCCGT
TTTGGACCCTGACGTTCGTTGTGAAGACAGACTTCCAACAGGACACGCTT
TACCTGGCGCACTGCTTCCCCTACAGATACACGGACCTGCAGCGTTACTT
GTGGGAGCTGGAAAACTCGCCGCTAGGTGTTAGCTGCGCCATTAGAAGGA
GGACCCTTTGCGAGACCCTTGCCGGCAACGCGTGCGACCTGCTCACCATC
ACATCGCCGGGGGGTTGCCACACGGAAAAGAAAGGCATCGTTATCTCGGC
CAGATACACGGACCTGCAGCGTTACTTGTGGGAGCTGGAAAACTCGCCGC
TAGGTGTTAGCTGCGCCATTAGAAGGAGGACCCTTTGCGAGACCCTTGCC
GGCAACGCGTGCGACCTGCTCACCATCACATCGCCGGGGGGTTGCCACAC
GGAAAAGAAAGGCATCGTTATCTCGGCCAGAGTGCACCCCGGCGAGACAA
ACGCCTCCTGGATGATGAAGGGCGTCTTGGACTTCCTCGGCTCGGACTGT
CATTGTGCCGTCGCCTTGAGAGATAAGTTCGTCTTCAAGATCGTTCCGAT
ACTCAACCCCGACGGCGTGATCGTAGGGAACTGCCGCTGTTCCCTGGCCG
GGGGCGACCTCAATCGTCAGAGTGCACCCCGGCGAGACAAACGCCTCCTG
GATGATGAAGGGCGTCTTGGACTTCCTCGGCTCGGACTGTCATTGTGCCG
TCGCCTTGAGAGATAAGTTCGTCTTCAAGATCGTTCCGATACTCAACCCC
GACGGCGTGATCGTAGGGAACTGCCGCTGTTCCCTGGCCGGGGGCGACCT
CAATCGTCAGTACGAGCAACCGAAACGGGAGCTCTATCCGGAGGTGATGA
GCCTCAAGCAGATGATCGCCAATTTCAGCATTGGCAAAGAGTACGAGCAA
CCGAAACGGGAGCTCTATCCGGAGGTGATGAGCCTCAAGCAGATGATCGC
CAATTTCAGCATTGGCAAAGAGGTGCTGCTATTCGTCGACCTGCACGGCC
ACTCCAAGAAGAGCAATATCTTCATGTACGGCGTCGAAAACCCGACCGAC
GACGCGTTGTACATGCGGGAGAGAGTCGTCCCAAGCCTGCTTCATGAAGC
GAGTCCCCTGTTCAACCTGGGAGACTGCACCTTCGATGTGCTGCTATTCG
TCGACCTGCACGGCCACTCCAAGAAGAGCAATATCTTCATGTACGGCGTC
GAAAACCCGACCGACGACGCGTTGTACATGCGGGAGAGAGTCGTCCCAAG
CCTGCTTCATGAAGCGAGTCCCCTGTTCAACCTGGGAGACTGCACCTTCG
ATATCGGCAAGGGTAAAGAAGGGTGTGGCAGAGTGGTGGTGAGAAGGCAG
CTCGGCATCGTGAACGCGTACACAATGGAGGCAAGCTTTATGGGAGCAGA
CCAGATCGGCAAGGGTAAAGAAGGGTGTGGCAGAGTGGTGGTGAGAAGGC
AGCTCGGCATCGTGAACGCGTACACAATGGAGGCAAGCTTTATGGGAGCA
GACCAGGGTGAATTTCAGGGCGTCCACTTCCACCAGGGACACTACGAGGC
CATGGGACACTCTCTCTGCCAAACATTGTTGGATCTGGTCGACACCGACC
AGGGCAAGGTCGAGGGCATCGTCCAAAAGCTCAAGGACAAGGTGAATTTC
AGGGCGTCCACTTCCACCAGGGACACTACGAGGCCATGGGACACTCTCTC
TGCCAAACATTGTTGGATCTGGTCGACACCGACCAGGGCAAGGTCGAGGG
CATCGTCCAAAAGCTCAAGGACAAGTTCCCGATCGACCAGTCACGAGTGG
TTTCGAAGCAAGATGACTACGGTGATCGCCGCAACGGCGGCAGCTCGAGC
ACTTCCTCCGACGACTCCGACAGCCCCAGCCCCCGCCGCCAGCGTCACCG
TCTTACCCCTCGGCCGCCATCTTCCAAGCCGTCTTCTCCTTCCGCCCGAG
CCGTTTCCCGCCCTTCTTCATCTTCGGCAGGGAGAGGGAGGAAGGCCGGA
CAGCAAAGAGAGCCGGCAAGAGGCACTGTGGTTGACGGTGGCAGCTCTGG
CAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGCAAAAACG
AAGAGGGCAAGCGGCAAACTCCCAGGAGCGCAAGGAGCAAAAGCACCCTA
CACGCTGGTGGCTCCGAGCACCCTACGCCAGCGGCACCAAAGGCGCCGCC
GCCAAGAATCACGACCCCCGTAACCAACACCCGGCATGCTAGTGCCGCCG
CTCCCCCGTCGCAGAAACCTTCGGCGACAAAGCCGTCCACCCCTAGGAGT
ACGTTAAAGGCTGCCGGCGGAGGGAACGCTGCGATGAAAAGCGCCTCCGC
TAAAGGTGGCGGATCGAAAACCTCCGCGCCAAGAGCGTCCTCCGCGAGCA
GTAAACCCCCCGGCGCCTCCAAGCAGAAAGAAAAAGAGAGAGAGAAAGAG
GAGAAGGTTCCCGCTTCCGGCAGAGCCGGCGCCGCGGGCGCTCTTCCAGC
TGGTGCTCGAAAGAAAGGCAGAGCCGCACCCAAACCTGGATCGAGTACCT
CAGCGGGGGCTAGCGCCACAACTGCAGTTCGGGGAGGAAGCGCAAAGCTC
GCGGCAGGCGGTAGGAAATCGGTCTCGGGGCGGAGCGGCGGGGGTACACC
CGTCAAGGCCTTGAATGCCGCTGCGGTGCCCCCTCTTGTCCTCGCCCGGG
TAGAGGGTGCCGGCGACACGGCTCCCACCAACGGCAGCGGAAAATTTAAG
AAAACTCCCAAGAAGGGCGTCAAGGCGAAGGGTGCTCCGCCCGTGGGTCC
GTCTGCCCCCGCTCAAAGGCCAAAGTCGTCGCCCGCTTCGAGATCGATTT
CTAGCCCCCGGCGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTGCT
GCTGCGGATGCCCCTCGAAGGGCTCCCTCCGCGCCCTCAAAGACGGGGGC
GACGCGAGCAGATGCGGGTGGCAGTAGTGCGAGCAGTCGTGGTGGCGGCA
CGACGGGAAGAGGGGCTAAGGCGAAAGGGGGAGGGCGTGGGAACGGGAAG
AAGGAGGTCCTGCCGCTGCCGCCGCTCAAGTCCAAGGTGAAGAAAGCTGC
CGCGAATATTTCTTCCGGAAGATAGGTTCCCGATCGACCAGTCACGAGTG
GTTTCGAAGCAAGATGACTACGGTGATCGCCGCAACGGCGGCAGCTCGAG
CACTTCCTCCGACGACTCCGACAGCCCCAGCCCCCGCCGCCAGCGTCACC
GTCTTACCCCTCGGCCGCCATCTTCCAAGCCGTCTTCTCCTTCCGCCCGA
GCCGTTTCCCGCCCTTCTTCATCTTCGGCAGGGAGAGGGAGGAAGGCCGG
ACAGCAAAGAGAGCCGGCAAGAGGCACTGTGGTTGACGGTGGCAGCTCTG
GCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGCAAAAAC
GAAGAGGGCAAGCGGCAAACTCCCAGGAGCGCAAGGAGCAAAAGCACCCT
ACACGCTGGTGGCTCCGAGCACCCTACGCCAGCGGCACCAAAGGCGCCGC
CGCCAAGAATCACGACCCCCGTAACCAACACCCGGCATGCTAGTGCCGCC
GCTCCCCCGTCGCAGAAACCTTCGGCGACAAAGCCGTCCACCCCTAGGAG
TACGTTAAAGGCTGCCGGCGGAGGGAACGCTGCGATGAAAAGCGCCTCCG
CTAAAGGTGGCGGATCGAAAACCTCCGCGCCAAGAGCGTCCTCCGCGAGC
AGTAAACCCCCCGGCGCCTCCAAGCAGAAAGAAAAAGAGAGAGAGAAAGA
GGAGAAGGTTCCCGCTTCCGGCAGAGCCGGCGCCGCGGGCGCTCTTCCAG
CTGGTGCTCGAAAGAAAGGCAGAGCCGCACCCAAACCTGGATCGAGTACC
TCAGCGGGGGCTAGCGCCACAACTGCAGTTCGGGGAGGAAGCGCAAAGCT
CGCGGCAGGCGGTAGGAAATCGGTCTCGGGGCGGAGCGGCGGGGGTACAC
CCGTCAAGGCCTTGAATGCCGCTGCGGTGCCCCCTCTTGTCCTCGCCCGG
GTAGAGGGTGCCGGCGACACGGCTCCCACCAACGGCAGCGGAAAATTTAA
GAAAACTCCCAAGAAGGGCGTCAAGGCGAAGGGTGCTCCGCCCGTGGGTC
CGTCTGCCCCCGCTCAAAGGCCAAAGTCGTCGCCCGCTTCGAGATCGATT
TCTAGCCCCCGGCGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTGC
TGCTGCGGATGCCCCTCGAAGGGCTCCCTCCGCGCCCTCAAAGACGGGGG
CGACGCGAGCAGATGCGGGTGGCAGTAGTGCGAGCAGTCGTGGTGGCGGC
ACGACGGGAAGAGGGGCTAAGGCGAAAGGGGGAGGGCGTGGGAACGGGAA
GAAGGAGGTCCTGCCGCTGCCGCCGCTCAAGTCCAAGGTGAAGAAAGCTG
CCGCGAATATTTCTTCCGGAAGATAG
back to top