mRNA_C-linearis_contig97.17063.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 1235 bits (3196), Expect = 0.000e+0
Identity = 622/750 (82.93%), Postives = 645/750 (86.00%), Query Frame = 1

Query:    1 MLRRHFKRRNYFAAATAR-RAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPS--PSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*ASLSPYCR----GGRGGGGEEKSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            MLR+H+K+RNY+AAATA  R +YRWCYAEQVDQAAPLPDRSNGWRY GPR+GETYRRQAVFGAGFRLRLPFPRL  GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAA ETWRVILCWGSR RRIDVNQHGIP SL DLQVRAGV  EDPRFRQL+IASFGHRLV+YDPLTEFG+ WKERLP ACLAVLVADSWRDCQ+GLL RDRRRFGFRDVDPLTGAFMDSR GGRSKKGVKRAPPNAL GGNYFRNLYSIMLERDVG  EF+AWLSGEEC+PAVTVRHL+KWLKTTKASVVVWSH   RG G    G      S  P A   G R   V    R  L+G    R  G      G        H        R        G GEEKSDGDTR FGRCADMT AIL SSQT+ DQQTARKRRRG DDKADSKKTWYAPPGTALDELMLHLHLGGVAC GRLTSYSHWDSLSLPAHGII+R+WCGASMGGLDPD LECDEATRLIELHGTLGRKLIRGVMD RVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDING HTAAMLSM NLPAFTHMDEVQ FDGH IEDWTLYVVRL+A G+PDVFLNADVTPVFGRNYKRYLAL+ TPAPHRVSHFVRPART++KC IP LVQDLLARDLGEPLLQD DAARRFKKGL VRTSGLLQQRHADRINAVMVTTS+EAMA G
Sbjct:    1 MLRQHYKKRNYYAAATALPRPEYRWCYAEQVDQAAPLPDRSNGWRYLGPREGETYRRQAVFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSH---RGSGAEVVGAKGQTTSLRPRALHVGVREGHV---YRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVG 744

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE)

HSP 1 Score: 1004 bits (2597), Expect = 0.000e+0
Identity = 536/746 (71.85%), Postives = 567/746 (76.01%), Query Frame = 1

Query:   10 RHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPS--PSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*ASLSPYCR----GGRGGGGEEKSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            RH+K+R+Y+AAATARR +YRWC  EQVD+A P+  RSNGWRY GPR+GETYRRQAVFGAGFRL LPFPRLP GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVH  DADAWRAAFVDVEG GHGQLVVSAA ETWRVILCWGSR RRIDVNQH IP SL DLQVRAGVT EDPRFRQL+IA FGHRLV++DP+TEFG+TW ER P A LAVLVADSWRDCQI LL RD+RRF F   D L+G              VKRA PNAL GGNYF NLYS +LERDVG  EF+AWL GEEC PAVTVRHLEKWLKTTKASVVVWSH   RG G   +GP D P S  P A   G R   V    R  L+G    R         G        H A      R        G GEEKSDGDTRTFGRCADMT AILA+ QTE DQQT RKRRRGVDDKADSK+TW                         LTSYSH DSLSLPAHGIIVR+W GASM GLDPD LECDEATRLIELHGTLGRKLI GVMD RVSSEYSPSLLALLEVCWRGPI GAEDA GTTYGPGDWQCDING HTAAM SM NLPAFTHMD+ QAFDGH IEDWTL VVRL+AGG+PDVF              RYLAL+ TPA +RV+HFVRPART RKC IP LVQD+LARDLGEPLLQDLDAARRFKKGLLVRTSGLLQ+RHA RINAVMVTTS+EAMA G
Sbjct:    3 RHYKKRHYYAAATARRPEYRWCGVEQVDEAVPMSTRSNGWRYLGPREGETYRRQAVFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRVILCWGSRGRRIDVNQHSIPTSLVDLQVRAGVTSEDPRFRQLNIACFGHRLVRHDPVTEFGVTWTERSPGAYLAVLVADSWRDCQIDLLERDQRRFAF---DLLSG--------------VKRAAPNALDGGNYFCNLYSKILERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSH---RGSGAEVRGPKDQPTSLRPRALHVGVREGHV---YRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVF--------------RYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQRRHAHRINAVMVTTSDEAMAVG 686

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 870 bits (2248), Expect = 4.890e-289
Identity = 449/735 (61.09%), Postives = 536/735 (72.93%), Query Frame = 1

Query:   64 YRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPS--PSASCRGSRGPRVPPGARWPLEGSIHQRSRGGS-RPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSD-------GDTRTFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            YRWC  EQVDQA PLP+R+NGWRY+GPR G  YRRQAVFG G+R+R+       GPG+RWFNSHP GGDP L +FQ+WA    RR LVH  DADAW+ AF+DVEGGG GQLVVSAA +TWR ILCWGS  RRI+++  GIP SL++LQVRAG+    PRFRQL+IASFGHR+V+Y+PLT F +TWK+RLP ACLAVLVAD+WRDCQ+ LL+R+RRRFGFRDVDP+TG+FM+S  GGR ++G      NAL GGNYFRNL+S++L+RDVG  EF  WLSG    PA+T+R LEKWL  T+A+VVVWSH   RG G    GP D      P A   G R            EG +++    G  R  FG        H  S+    R  R     E+ D       G  +TF   AD+ + ++A +Q+E +   QQ ARK+R+    +++   TWYAPPGT LDELMLHLHL GV+C GRLTSYSHWDSLSLPAHGI +R+WC ASMGGLDPD LE D+ATRLIELH  LG K   GV+D RVSS+YS SLLALLEVCWRGPIVGAE+ SGT+YGP DWQCDING HTAA++SM  +P F H+DEV+ +D HGIEDWTLY++ LDA G+PDVF NADVTPVFGRNYKRYL LV T A HRV+HFVRP+R V  C IP LV+DLLA + G+P LQD D AR+FKKG+ VR SG+LQQR+ADRI+AVMVT  +EA A G
Sbjct:   21 YRWCCVEQVDQAEPLPNRNNGWRYKGPR-GVMYRRQAVFGTGYRVRIS--ATSRGPGYRWFNSHPAGGDPSLENFQSWATRTWRRGLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSH---RGSGDHVLGPIDKKTDLRPRALHVGVR------------EGHVYRLELDGPWRDRFGSSLDVAIEH--SVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEF-NTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVG 734

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 876 bits (2263), Expect = 9.920e-287
Identity = 457/742 (61.59%), Postives = 535/742 (72.10%), Query Frame = 1

Query:   37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDD-----PPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSDGD---TRTFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            A +++R A YRWCY EQVDQA PL +RSNGWRYRGPR G TYRRQAVFG G+R+R+ FP   +GPGH WFNSHP+GGDP+L  FQ WAR +L R +VH  DA+AWR AFVDVEGGG GQLVVS+A ETWRVILCW S  RRIDV+  GIP SL  LQVR+GV  + P FRQL+IA+FGHR+V+Y P+T FG  W+E+LP ACLAVLVAD+WRD Q+ LL R+R+RFGFRDVDP TGAF  S  GGR KKG      NAL GGNYFRNLYSI+LERD+G  EF  W+SG+   PA+T+RHLEKWL  TKA VVVWSH   RG G    GP +      PP+     R     R+    RW        R R GS         A+     +   + R       EE+ D     T+TF   AD+ + I+A  QT      Q   +KR+ G   K    KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPA GII+R+WC ASMG LDPD  E D+ATRLIELH  LG K  RGV+D RVSS+YS SLLALL VCWRGPIVGAEDASG+ YG  DWQCDING HTAA+++M  +P F HMDEV+ FDGH IEDWTLY+++LDA GEPDVFLNADVTPVFGRNYKRYL L+     HRV+HFVRP+RTV KC I  LV+DLLA +LG+PLL+D D ARRFKKG+ VR SG+LQQR+ADRI+AVMVT+++EA A G
Sbjct:    8 AVSSSRAASYRWCYVEQVDQAEPLANRSNGWRYRGPR-GVTYRRQAVFGTGYRIRISFPSS-AGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSH---RGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRW--------RDRFGSSLDV-----AVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVG 728

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE)

HSP 1 Score: 747 bits (1928), Expect = 1.480e-249
Identity = 402/701 (57.35%), Postives = 480/701 (68.47%), Query Frame = 1

Query:   37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL--VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDD-----DPPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSDGD---TRTFGRCADMTTAILASSQTEAD--QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQD 2103
            A ++     YRWCY EQVDQ AP+  RSNGWR                     +R+ FP  P GPG+RWFNSHPLGGDP+L +FQ WART+L+  +VH  DA+AWR AFV+VEGGG GQLVVSAA E+WRVILCW S  RRI+V+  GIP SL  LQVR+G+  + P FRQL+IA+FGHR+V+Y P+T FG  W+++LP ACLAVLVAD WRD Q+ LL   ++RRRFGFRDVDP TGAFM S  GGR KKG      NAL GGNYFRNLYSI+LERD+G  EF  W+SG+   PA+T+ HLEKWL  T ASVVVWSH   RG G    GP D      PP+     R     R+       LEG    R  G S  +      A+     +   + R       E++ D     T+TF   AD+ + I+A +QT  D  +Q   KR+ G   K    KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPAHG+++R+WC ASMGGLDPD  E D+ATRLIELH  LG K  RGV+D RVSS+YS SLLALLEVCWRGPIVGAEDASG++YG  DWQCDING HTAA+++M  +P F HMDEV+ FDGH IEDWTLY ++LDA GEPDVFL+ADV PVFGRNYKRYL L+     HRV+HFVRP+RTV +C IP LV+DLLA +L     +D
Sbjct:    8 AVSSPHATSYRWCYVEQVDQVAPVVGRSNGWR---------------------VRISFPSSP-GPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVDT-GIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSH---RGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLV------LEGPWGDRF-GSSLDV------AIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR--KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHELERTWYRD 666

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE)

HSP 1 Score: 751 bits (1939), Expect = 5.570e-247
Identity = 428/775 (55.23%), Postives = 499/775 (64.39%), Query Frame = 1

Query:   37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL-VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGS-RPIFGCGGRALRVH*ASLSPYCRGGR-GGGGEEKSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACT-GRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHT----------------------------------------AAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            A +++  + YRWCY EQVDQA PL  RSNGWRY GP  G TYRRQAVFG GFR+R+ FP  P GPGHR                         R +VH  DA+AWR AFVDVEGGG GQLVVSAA +TWRVILCW S  RRIDV+  GIP SL +LQVR+GV  + P FRQL+IA+FGHR+V+Y P+T FG  W+E+LP ACLAVLVAD+WRD Q+ LL  R+RRRFGFRDVDP TGAFM S  GGR KKG      NAL GGNYFRNLYSI+LERD+G  +F  W+SG+   PA T          TKASVVVWSH   RG G    GP D   +        R P V  G R   EG +++    G  R  FG        H   +  Y +  R     EEK + D   FG     T + +A   +E                    KTWYAPPGTALDELMLHLHLGGV+C  G+LT+YS WDSLSLPAHG+I+R+WC ASMGGLDPD  E D+ATRLIELH  LG K  RGV+D RVSS+YS SLLALLEVCWRGPIVGAEDASG++YG  DWQCDI  +                                          AA+++M  +P F HMDEV+ FDGH IEDWTLY+V+LDA GEPDVF NADVTPVFGRNYKRYL L+     +RV+HFVRP+RTV +C IP LV+DLLA +LG+PLL+D D ARRFK G+ VR SGLLQQR+ADRI+AVMVT+S+EA A G
Sbjct:    9 AVSSSHASSYRWCYVEQVDQAEPLAGRSNGWRYMGP-GGVTYRRQAVFGTGFRIRISFPSSP-GPGHRQV-----------------------RGMVHPRDAEAWRTAFVDVEGGGLGQLVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSILLERDIGEVKFDKWVSGDAEPPASTPSRKVALDYMTKASVVVWSH---RGTGANILGPPDGKTN-------LRPPTVHVGVR---EGHVYRLVLEGPWRDRFGSSLDVAIEH--RVRTYRKFRRISEMTEEKEEPDPTGFGA---KTFSCVADIVSEC-------------------KTWYAPPGTALDELMLHLHLGGVSCKKGKLTNYSRWDSLSLPAHGLIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLIDNAPRYRVTHFVRPSRTVSRCHIPKLVKDLLAHELGDPLLEDADCARRFKNGIFVRASGLLQQRYADRIDAVMVTSSDEASAVG 720

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5L8I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I4_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 4.520e-243
Identity = 429/717 (59.83%), Postives = 460/717 (64.16%), Query Frame = 1

Query:   85 QVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPS--PSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            +VDQAAPL  RSNGWRYRG R+GETYRRQAVFGAG+RLRLP  R+   PGHRWFNSHP GGDPDL DFQA A TML R LVH  DADAWR A VDVEGGG GQLVVSA  ETWR                HGIP SL  LQVRAGV  ED RF+QL+IASFGHRLV++DPLT+FGITWKER P ACLAVLVADSWRDCQ+ LL RDRR FGFRDVDPLTG                          NY RNLYSIMLERDVGP E +AWLSGE+ IPAV VRHLE+W KTTKA VVVWS       G    G  D   S  P A      G R  P  R  L+G    R  G           +L V   S+    R  R             T  RCADMT AILAS+Q+  DQQT RKRRRGVDD ADSKKTWYAPPGTALDELMLHLHLGGV CTGRLTSYSHWDS+SLPAHGII R WCGASMGGLD                                                        DASGTTYGPGDWQCDING HTAA+ +MGNLPAFTHMDEVQAFDG  +E+WTLYV RLDAGG+PDV LN+D                    P R+   +RPARTV+K  IPGLVQ LL RDLGEPLLQD  AARRFKKGLLVRTSGLLQQRHA RINAV+VTTSE+A+A G
Sbjct:    7 EVDQAAPLACRSNGWRYRGEREGETYRRQAVFGAGYRLRLPLHRVYPVPGHRWFNSHPFGGDPDLRDFQALAGTMLCRGLVHPRDADAWRVAIVDVEGGGLGQLVVSAVDETWR----------------HGIPTSLVGLQVRAGVASEDQRFKQLNIASFGHRLVRHDPLTDFGITWKERDPGACLAVLVADSWRDCQVDLLARDRRIFGFRDVDPLTG--------------------------NYSRNLYSIMLERDVGPGELSAWLSGEKRIPAVAVRHLEEWRKTTKAPVVVWSR---ASNGADVLGSKDQLTSLRPRAL---HVGVREGPVYRLVLDGPWKDRFSGAREWAVD---PSLDV---SVEHCVRTRR------LFHRIAETLVRCADMTEAILASNQSAEDQQTTRKRRRGVDDMADSKKTWYAPPGTALDELMLHLHLGGVTCTGRLTSYSHWDSMSLPAHGIITRIWCGASMGGLD--------------------------------------------------------DASGTTYGPGDWQCDINGAHTAAIRNMGNLPAFTHMDEVQAFDGRDMENWTLYVARLDAGGDPDVCLNSD--------------------PLRI---LRPARTVQKSHIPGLVQGLLDRDLGEPLLQDWYAARRFKKGLLVRTSGLLQQRHAGRINAVIVTTSEDAIAVG 584

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE)

HSP 1 Score: 703 bits (1815), Expect = 3.400e-224
Identity = 391/702 (55.70%), Postives = 472/702 (67.24%), Query Frame = 1

Query:  160 YRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRV---H*ASLSPYCRGGRGGGG-EEKSDGDTRTFGRCA-----DMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAGG 2229
            YRRQAVFGAG+R+R+   R   GP +RWFNSHP GGDP L +FQ+WA    RR LVH  DADAW+ AF+DVEGGG GQLVVSAA +TWR ILCWGS  RRI+++  GIP SL++LQ              L+IASFGHR+V+Y+PLT FG+TWK+RLP ACLAVLVAD+WRDCQ+ LL+R+RRRFGFRDV+P+TG+F++S  GGR K G      NA  GGNYF+NL+ ++L RDVG  EF  WL+G    PA  +R LEKWL  TKA+VVVWS+   RG G    GP D         R  RG  V  G R   EG +++    G  P     G +L V   H  S+    R  R     EEK + DT   G  A     D+ + ++A +++E +   QQ ARK+R+    K      WYAPPGTAL+ELMLHLHL GV+C GRL+SYSHWDSLS+PAH                         TRLIELH  LG +   GV+D RVSS+YS SLLALL+VCWRGPIVGAE+ SGT+YGP DWQCDING HTAA++SM  +P F H+DEV+ +  H IEDWTLY + LDA G+PD  LNADVTPVFGRNYKRYL LV T A HRV+HFVRP+R V  C IP L +DLLA +LG+ LLQD D AR+FKKG  VR SG+LQQR+ADRI+AVMVT  +EA A G
Sbjct:    2 YRRQAVFGAGYRVRISVSRR--GPEYRWFNSHPAGGDPSLENFQSWATRTWRRDLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQ--------------LNIASFGHRVVRYEPLTTFGMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVNPITGSFINSTGGGRQKGGATTPLRNASDGGNYFQNLFPVLLGRDVGSEEFGMWLAGVSEPPARKLRDLEKWLIKTKANVVVWSY---RGSGDHVLGPIDK----KTDLR-PRGLHV--GVR---EGDVYRLELDG--PWCNRFGSSLDVAIEH--SVRTQRRFRRTAEAIEEKEEPDTTECGSKAFTCVTDIVSDLMAINKSEVEDGPQQAARKKRKRG--KTSEFNMWYAPPGTALEELMLHLHLVGVSCRGRLSSYSHWDSLSVPAH------------------------VTRLIELHNELGLQFSHGVLDFRVSSQYSQSLLALLKVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDALGKPDELLNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDRLLQDADCARKFKKGTFVRASGMLQQRYADRIDAVMVTGCDEAFAVG 644

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BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5KE79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE79_9PHAE)

HSP 1 Score: 666 bits (1718), Expect = 8.240e-220
Identity = 396/791 (50.06%), Postives = 466/791 (58.91%), Query Frame = 1

Query:   37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEF----------GITWKERLPSACLAVLVADSWRDCQIGLLVR--DRRRFGFRDVDPLTGAFMDSRVGGRSKKGV---------------------------------------------------KRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGS-RPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEA 2217
            A ++     YRWCY EQVDQAAPL  RSNGWR                     +R+  P  P  PG  WFNSHPL GDP+L +F  WA T+L+R +VH  DA+AWR AFVDVEGGG  QLVVSAA +TW VILCW S  RRIDV+  GIP SL +LQVR+GV  + P FRQL+IA+FGHR+V+Y P+T F          G  W+++LP ACLAVLVAD WRD Q+ LL +  +RRRFGFRDVDP TGAFM S  GGR KKG                                                    +  P NAL GGNYFRNLYSI+LERD G  EF  W+SG+   PA+T+ HLEKWL  TKASVVVWSH   RG G    GP +   +        R P V  G R   EG +++    G  R  FG          +SL             E S    R F R  DMT       + E +  T     +     AD  +T       AL ELMLHLHL GV+C G+LT+YS+WDSLSLPAHG+I+R+WC ASMGGLD D  E D+ATRLIELH  LG K  RGV+D RVSS+YS SL ALLEVCWRGPIVGAEDASG++YG  DWQCDING HTAA++ M  +P F HMD+V+ FDG  IEDWTL ++ LDA  E DV LNADVTPVFGR YKRYL L+ T   HRV+ FVR +RT                        D D AR+FKKG+ VR SG+LQQR A+RI+AVMVT+S EA
Sbjct:    8 AVSSTHATSYRWCYVEQVDQAAPLAGRSNGWR---------------------VRISLPSSPR-PGDMWFNSHPLRGDPNLYNFHTWAGTVLQRGMVHPRDAEAWRTAFVDVEGGGLRQLVVSAADDTWLVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPLFRQLNIATFGHRVVRYAPITAFVXXXXXXXXXGKKWQKQLPGACLAVLVADVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVKNKNDRSTLLTVGTTSATSIRFYWSATXARERRRFGFRDVDPAGRACEKQERPFNALDGGNYFRNLYSILLERDTGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSH---RGTGANILGPSNGKTN-------LRPPTVHVGVR---EGHVYRLVLEGPWRDRFG----------SSLDVAI---------EHSARTYRKFRRIPDMT-------EEEEEPDTTGFGTKTFSCVADIVRT-------ALGELMLHLHLAGVSCKGKLTNYSYWDSLSLPAHGVIIRTWCSASMGGLDSDDFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLPALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMDMETVPVFGHMDKVEEFDGQDIEDWTLVIIYLDALEESDVILNADVTPVFGRKYKRYLDLIDTAPRHRVTDFVRTSRT------------------------DADCARQFKKGIFVRVSGMLQQRCAERIDAVMVTSSNEA 705

[Close]

BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE)

HSP 1 Score: 682 bits (1759), Expect = 9.800e-219
Identity = 377/703 (53.63%), Postives = 449/703 (63.87%), Query Frame = 1

Query:   37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL-VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPSPSASCRGSRGPRVPPGARWPLEGSIHQRSRGGS-RPIFGCGGRALRVH*ASLSPYCRGGRGGGGEEKSDGDTRTFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDIRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGVHTAAMLSMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGEPDVFLNADVTPVFGRNYKRYLALVLTPAPHRVSHFVRPARTVRKCRIPGLVQDLLARDLGEPLLQDLDAARRFKK 2130
            A +++    YRWCY EQVDQA PL  RSNGWRY GP  G TYRRQAVFG GFR+R+ FP  P GPGHRWFNSHPLGGDP+L +FQ WART+L+R                       G LVVSAA +TWRVILCW S  RRIDV+  GIP SL +LQVR+GV  + P FRQL+IA+FGHR+V+Y P+T FG  W+E+LP ACLAVLVAD+WRD Q+ LL  R+RRRFGFRD  P+                      NAL GGNYFRNLYSI+LERD+G  EF  W+SG+   PA+T+ HLEKWL  TKASVVVWSH   RG G    GP D   +        R P V  G R   EG +++    G  R  FG    +L V      P           + +    +TF   AD+ + I+A  QT  D   Q   +KR+ G   K    KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPAHG+I+R+W  ASMGGLDPD  E D+ATRLIELH  LG K  RGV+D RVSS+YS SLLALLEVCWRGPIVGAEDASG++YG  DWQCDING HTAA+++M  +P F HMDEV+ FDGH IEDWTLY+++LDA                                  V+H+V P+RTV +C IP L++DLL  +LG+PLL+D D ARR KK
Sbjct:    9 AVSSSHATSYRWCYVEQVDQAEPLAGRSNGWRYMGP-GGVTYRRQAVFGTGFRIRISFPSSP-GPGHRWFNSHPLGGDPNLYNFQTWARTVLQR-----------------------GMLVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDGAPVQNK-------------------NALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSH---RGTGANILGPPDGKTN-------LRPPTVHVGVR---EGHVYRLVLEGPWRDRFGS---SLDVAIEHREP-----------DPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGLIIRTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDA---------------------------------LVTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKK 605

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LFQ2_ECTSI	0.000e+0	82.93	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KTC4_9PHAE	0.000e+0	71.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSM3_9PHAE	4.890e-289	61.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCS9_9PHAE	9.920e-287	61.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KMS8_9PHAE	1.480e-249	57.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LNU8_9PHAE	5.570e-247	55.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L8I4_9PHAE	4.520e-243	59.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTS3_9PHAE	3.400e-224	55.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KE79_9PHAE	8.240e-220	50.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J754_9PHAE	9.800e-219	53.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930828.8113666-CDS-C-linearis_contig97:15621..16806	1622930828.8113666-CDS-C-linearis_contig97:15621..16806	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 15622..16806 +
1690881270.9528406-CDS-C-linearis_contig97:15621..16806	1690881270.9528406-CDS-C-linearis_contig97:15621..16806	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 15622..16806 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930828.833419-UTR-C-linearis_contig97:16806..19968	1622930828.833419-UTR-C-linearis_contig97:16806..19968	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 16807..19968 +
1690881270.967543-UTR-C-linearis_contig97:16806..19968	1690881270.967543-UTR-C-linearis_contig97:16806..19968	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 16807..19968 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17063.1	prot_C-linearis_contig97.17063.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig97 15622..16806 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig97:15622..19968+
coding sequence from alignment at C-linearis_contig97:15622..19968+

protein sequence of mRNA_C-linearis_contig97.17063.1

>prot_C-linearis_contig97.17063.1 ID=prot_C-linearis_contig97.17063.1|Name=mRNA_C-linearis_contig97.17063.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=395bp
MLRRHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQ
GETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWA
RTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAAETWRVILCWGSR
SRRIDVNQHGIPGSLADLQVRAGVTLEDPRFRQLSIASFGHRLVKYDPLT
EFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAF
MDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSG
EECIPAVTVRHLEKWLKTTKASVVVWSHWGLRGRGCRSQGPDDDPPSPSA
SCRGSRGPRVPPGARWPLEGSIHQRSRGGSRPIFGCGGRALRVH*

mRNA from alignment at C-linearis_contig97:15622..19968+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig97.17063.1 ID=mRNA_C-linearis_contig97.17063.1|Name=mRNA_C-linearis_contig97.17063.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4347bp|location=Sequence derived from alignment at C-linearis_contig97:15622..19968+ (Chordaria linearis ClinC8C monoicous)
ATGCTCCGACGACACTTCAAGAGGAGAAATTACTTTGCCGCCGCCACCGC
TCGGCGGGCCCAGTACCGGTGGTGCTACGCCGAGCAGGTGGACCAGGCCG
CTCCCCTGCCCGACAGGAGCAACGGCTGGCGCTACCGGGGCCCACGGCAG
GGAGAGACCTACAGGCGCCAGGCGGTCTTCGGGGCCGGGTTCCGCCTTCG
CCTGCCGTTCCCCCGTCTCCCCTCGGGGCCGGGACACCGCTGGTTCAACT
CGCACCCCCTCGGCGGGGATCCCGACCTCCCGGACTTCCAGGCCTGGGCG
AGAACCATGCTGCGCAGGCGCCTGGTGCACAGAGACGACGCCGACGCCTG
GCGGGCGGCCTTCGTCGATGTCGAGGGCGGCGGGCACGGGCAGCTCGTCG
TCTCCGCCGCCGCCGAGACCTGGCGAGTCATCCTCTGCTGGGGATCACGG
AGCCGAAGGATCGACGTTAACCAGCACGGCATCCCGGGATCTCTCGCCGA
CCTGCAGGTTCGTGCCGGTGTGACATTGGAGGATCCACGGTTCAGACAGC
TCAGCATCGCGTCCTTCGGCCACCGACTCGTGAAATACGATCCCCTGACC
GAATTTGGAATTACTTGGAAGGAGCGTCTCCCGAGCGCCTGTCTGGCTGT
CCTGGTCGCAGATTCGTGGCGTGACTGTCAGATCGGTCTACTCGTACGCG
ATCGACGGAGATTTGGGTTCCGTGACGTAGACCCGCTGACAGGTGCGTTC
ATGGATTCTCGTGTCGGCGGACGGTCGAAGAAGGGTGTCAAGCGTGCACC
GCCGAACGCCCTGGTTGGGGGAAACTATTTCCGCAACCTCTACTCGATAA
TGCTCGAGCGGGATGTTGGCCCAGCAGAGTTCGCAGCGTGGCTCTCGGGC
GAAGAATGTATACCGGCCGTTACTGTCCGCCATCTCGAGAAGTGGCTCAA
GACCACCAAGGCGTCAGTGGTCGTGTGGTCGCACTGGGGGCTCCGGGGCC
GAGGTTGTCGGTCCCAAGGGCCAGACGACGACCCTCCGTCCCCGAGCGCT
TCATGTCGGGGTTCGCGAGGGCCACGTGTACCGCCTGGTGCTCGATGGCC
CTTGGAAGGATCGATTCACCAGCGCTCGCGAGGGGGCAGTCGGCCCATCT
TTGGATGTGGCGGTCGAGCACTGCGTGTGCACTAGGCGTCTCTTTCGCCG
TATTGCCGAGGCGGCCGAGGAGGGGGAGGAGAGGAGAAATCGGATGGGGA
CACGAGAACCTTTGGTCGTTGCGCGGACATGACGACGGCAATCCTCGCCT
CGAGCCAGACGGAGGCGGACCAGCAGACCGCTCGTAAGCGCAGGAGAGGA
GTCGATGACAAGGCGGACAGCAAGAAGACCTGGTACGCACCTCCCGGTAC
GGCTCTGGACGAGCTCATGCTCCATCTCCACCTCGGTGGCGTGGCTTGTA
CGGGCAGGCTGACGAGCTACAGCCACTGGGATTCGTTGTCGTTGCCCGCG
CACGGCATCATTGTTCGAAGCTGGTGCGGCGCGAGCATGGGCGGACTGGA
TCCAGATGTGCTCGAATGCGACGAAGCTACTCGTCTGATCGAGCTGCACG
GCACGCTGGGGCGCAAGCTCATTCGCGGTGTGATGGATATTCGGGTCTCC
AGTGAGTACAGCCCGTCTCTTCTCGCGCTACTCGAGGTGTGTTGGAGGGG
ACCCATCGTCGGGGCAGAGGACGCGTCGGGCACAACCTACGGACCGGGGG
ACTGGCAGTGCGACATCAACGGGGTGCACACGGCGGCAATGCTGAGCATG
GGGAATCTGCCGGCGTTCACCCACATGGACGAGGTGCAGGCATTCGACGG
CCACGGCATTGAGGATTGGACGTTGTACGTCGTCCGCCTGGACGCGGGTG
GCGAACCCGACGTCTTCCTGAATGCGGACGTAACGCCAGTCTTTGGCCGG
AACTACAAGCGATATTTGGCGCTCGTTCTCACCCCTGCCCCACATCGCGT
AAGCCACTTCGTGCGACCTGCGAGGACGGTTCGAAAGTGCCGCATACCCG
GTCTCGTGCAGGATCTTCTGGCCCGGGATCTCGGGGAGCCCCTCCTCCAA
GACCTGGACGCTGCTCGCAGGTTCAAGAAGGGCCTGCTGGTTCGCACGAG
TGGCTTGCTGCAGCAGAGGCACGCCGACAGGATCAACGCCGTCATGGTCA
CTACCAGCGAGGAGGCCATGGCCGGGGGGTAAGATCTTGCCCGTCCTCGG
CGAAGTTAATCGCATCAAGTCGGAGCTGCGGAGGAATGGTACCAATGGGG
AGCTTGGCATCGAGAAGCTCGATAGCGGAGATGCCTACCTTTGTTTCGAG
GCTAGCCGTGTTTGGTACCGGGACGGGTTCTGGGCTCTGGGGACGCTCAT
CCTAGACGAAACGCGCCTGCGTGTGTTGGAGGTGCGGAACATGCTCGAGG
CGTGCGGGGGGTCTGCCTTCAGCTACCAGTGCGACGCTGTGTTCTTCAGG
GGACCTCCTGAGGTCCAGGAGGAAGCAAGGCACCGATACGAGCATTTTTT
CAGCGACGAACTCAAAACGCCCGGCACTCTCAAGTTCGAGCCAGCTCTCA
AAAGTCCAGCGTCTCCCGATCGCGTCTTCGCTGGCATCGAGGTGAAGTTG
TCCCTCGATGATCTACCCCCCGCCATGAGGACCATTCCCTGCCCGCGGGA
GAGAGCGCTGCGTGTCGTCCCACTATGGGGCGGCATAGGGGATAGCTTCG
GTACCATGAGAGCCGCGCATGCAGCCTGGCGATCTGTCGGCAAGGACGAC
AAAAGGAAGATGTGGCCGGACATCTGCGCGGCGGAGTCACCAGCTACTCT
TGAACAACTGCTCCGCGAGCTGATGTCGCAAGAGGGCAGGGTCGTTTGTG
CGGTCACGGGAGAACACGGTGGAGCCGGGAAAAGCTACTGTGCGCTCCGT
GCTGCGAAAGCCGTGTTCAAGACCGGTCTTGTACTGACGCCCACGAACAG
CCTTCGTGCGTCATACACAGACCTTCCCCCCGGGTGGAGCGTGAAGACTG
CCGATCACCAGCTTGGGTTCTATATCGGCGACGACGCGCACGTGAGGAAG
ACCGCGGGCTCGATACACATCCCGAGAGTGGACGTTGTCATAATAGAGGA
AGCCGCGTACATGTCTCTGCATGCGCTCAGCATGATCCTCGCCGCGTCTC
ACAGCACCGGCGCCCACGTCATCGGAACGTACGACACTCATCAACTGCAG
CCCGTACGTGAGAGCAGTGGGGTGTCCATCGGCGTGGACAACGTCGACAG
GCAACTCGTTCTCGAGCGAGCGTTTCCCACCTGCTTCCACCTGTTCGCGC
GCAAGCGAGACAGGACGATCGACGAGCAGGTCGAAATGGACGATAGTCTG
TTGTACATCTTGGATGCGGGGAGACAACAGTGCCATAGCACAGACGAGAG
CCCTGGAGAGGTTTAGAGGGATAGAACCCACAAGGTATGGCCCACACGTC
TCCGATTTCCACCTCGCCTATACCAGGGATTGTGCGAGGTTCCATGCTTT
CCGGGGTTTGACGAGATGCAACGAGGTCGGGGGGTGGGACGCGCTGGGAC
AACGGGGGGTGGTGGGTGCCCAGTATCGAGACCTCGGGAAGACAGGCAAG
GTGCACAAGAACCACGCCTACCGCATCGTCCATTCGTCTGATGATTCGGT
CGTGGTGGAGAGCGCCTTCGATGACGGCGCCACCCTCGAAGAGACCACCC
TGAGTCGCGCCGCGGCAGAAATCCTGTTTGACCCCCCGGGTTCGTGTACG
GTGCATGCGGTTCAAGGTCGCACGGTGGACGGAAAATTGGTGATTCACCA
GGCGCGACACCGGTTTTCAGACGTTTACTGGCTGTACACAGCCATCAGCC
GAGCGACGGGGCCCTCAAACGTTGTAGTCCTCGATGACGTCCATCGGAGC
GTCAGCGACATGTCCGAACAGGCAAGGAGGTCGTGGGCGACCAGGAAGGT
TTCGATCTACCTGCGCGCCGATGTTAAGGCCGGGCGGCTGGACGACTGGG
AAGGGGGGCAGCACAAGGGCGCCCTTATCGAAGAACTCTTGCGCTGCTAC
GGTGGAATATGCAGCTTGTGCTCGATCGAGCTCGTCTGGGCAGTGTACAG
CGAGCGTCAGCCAACGCTCGATCGTCTCGACTGCGCCCTAGCCCACACGC
CGGGAAACGTTGACGTAAAGTGTTTGAAGTGCAACCGTGCCCGAGGTGGG
TTGGGAAGGGGACTTACAAAGAAGAAGAAGGAAGAAGAAAACAAAGTGTC
AGAGAAGTAGCCGTTACTGTCGAAAAGTTGGTTTATTTTGTATGGCA

Coding sequence (CDS) from alignment at C-linearis_contig97:15622..19968+

>mRNA_C-linearis_contig97.17063.1 ID=mRNA_C-linearis_contig97.17063.1|Name=mRNA_C-linearis_contig97.17063.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2370bp|location=Sequence derived from alignment at C-linearis_contig97:15622..19968+ (Chordaria linearis ClinC8C monoicous)
ATGCTCCGACGACACTTCAAGAGGAGAAATTACTTTGCCGCCGCCACCGC
TCGGCGGGCCCAGTACCGGTGGTGCTACGCCGAGCAGGTGGACCAGGCCG
CTCCCCTGCCCGACAGGAGCAACGGCTGGCGCTACCGGGGCCCACGGCAG
GGAGAGACCTACAGGCGCCAGGCGGTCTTCGGGGCCGGGTTCCGCCTTCG
CCTGCCGTTCCCCCGTCTCCCCTCGGGGCCGGGACACCGCTGGTTCAACT
CGCACCCCCTCGGCGGGGATCCCGACCTCCCGGACTTCCAGGCCTGGGCG
AGAACCATGCTGCGCAGGCGCCTGGTGCACAGAGACGACGCCGACGCCTG
GCGGGCGGCCTTCGTCGATGTCGAGGGCGGCGGGCACGGGCAGCTCGTCG
TCTCCGCCGCCGCCGAGACCTGGCGAGTCATCCTCTGCTGGGGATCACGG
AGCCGAAGGATCGACGTTAACCAGCACGGCATCCCGGGATCTCTCGCCGA
CCTGCAGGTTCGTGCCGGTGTGACATTGGAGGATCCACGGTTCAGACAGC
TCAGCATCGCGTCCTTCGGCCACCGACTCGTGAAATACGATCCCCTGACC
GAATTTGGAATTACTTGGAAGGAGCGTCTCCCGAGCGCCTGTCTGGCTGT
CCTGGTCGCAGATTCGTGGCGTGACTGTCAGATCGGTCTACTCGTACGCG
ATCGACGGAGATTTGGGTTCCGTGACGTAGACCCGCTGACAGGTGCGTTC
ATGGATTCTCGTGTCGGCGGACGGTCGAAGAAGGGTGTCAAGCGTGCACC
GCCGAACGCCCTGGTTGGGGGAAACTATTTCCGCAACCTCTACTCGATAA
TGCTCGAGCGGGATGTTGGCCCAGCAGAGTTCGCAGCGTGGCTCTCGGGC
GAAGAATGTATACCGGCCGTTACTGTCCGCCATCTCGAGAAGTGGCTCAA
GACCACCAAGGCGTCAGTGGTCGTGTGGTCGCACTGGGGGCTCCGGGGCC
GAGGTTGTCGGTCCCAAGGGCCAGACGACGACCCTCCGTCCCCGAGCGCT
TCATGTCGGGGTTCGCGAGGGCCACGTGTACCGCCTGGTGCTCGATGGCC
CTTGGAAGGATCGATTCACCAGCGCTCGCGAGGGGGCAGTCGGCCCATCT
TTGGATGTGGCGGTCGAGCACTGCGTGTGCACTAGATGCTCCGACGACAC
TTCAAGAGGAGAAATTACTTTGCCGCCGCCACCGCTCGGCGGGCCCAGTA
CCGGTGGTGCTACGCCGAGCAGGTGGACCAGGCCGCTCCCCTGCCCGACA
GGAGCAACGGCTGGCGCTACCGGGGCCCACGGCAGGGAGAGACCTACAGG
CGCCAGGCGGTCTTCGGGGCCGGGTTCCGCCTTCGCCTGCCGTTCCCCCG
TCTCCCCTCGGGGCCGGGACACCGCTGGTTCAACTCGCACCCCCTCGGCG
GGGATCCCGACCTCCCGGACTTCCAGGCCTGGGCGAGAACCATGCTGCGC
AGGCGCCTGGTGCACAGAGACGACGCCGACGCCTGGCGGGCGGCCTTCGT
CGATGTCGAGGGCGGCGGGCACGGGCAGCTCGTCGTCTCCGCCGCCGCCG
AGACCTGGCGAGTCATCCTCTGCTGGGGATCACGGAGCCGAAGGATCGAC
GTTAACCAGCACGGCATCCCGGGATCTCTCGCCGACCTGCAGGTTCGTGC
CGGTGTGACATTGGAGGATCCACGGTTCAGACAGCTCAGCATCGCGTCCT
TCGGCCACCGACTCGTGAAATACGATCCCCTGACCGAATTTGGAATTACT
TGGAAGGAGCGTCTCCCGAGCGCCTGTCTGGCTGTCCTGGTCGCAGATTC
GTGGCGTGACTGTCAGATCGGTCTACTCGTACGCGATCGACGGAGATTTG
GGTTCCGTGACGTAGACCCGCTGACAGGTGCGTTCATGGATTCTCGTGTC
GGCGGACGGTCGAAGAAGGGTGTCAAGCGTGCACCGCCGAACGCCCTGGT
TGGGGGAAACTATTTCCGCAACCTCTACTCGATAATGCTCGAGCGGGATG
TTGGCCCAGCAGAGTTCGCAGCGTGGCTCTCGGGCGAAGAATGTATACCG
GCCGTTACTGTCCGCCATCTCGAGAAGTGGCTCAAGACCACCAAGGCGTC
AGTGGTCGTGTGGTCGCACTGGGGGCTCCGGGGCCGAGGTTGTCGGTCCC
AAGGGCCAGACGACGACCCTCCGTCCCCGAGCGCTTCATGTCGGGGTTCG
CGAGGGCCACGTGTACCGCCTGGTGCTCGATGGCCCTTGGAAGGATCGAT
TCACCAGCGCTCGCGAGGGGGCAGTCGGCCCATCTTTGGATGTGGCGGTC
GAGCACTGCGTGTGCACTAG