Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 626 |
| Cds size | 462 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930819.291251-CDS-C-linearis_contig96:639328..639790 | 1622930819.291251-CDS-C-linearis_contig96:639328..639790 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 639329..639790 + |
| 1690881266.1560495-CDS-C-linearis_contig96:639328..639790 | 1690881266.1560495-CDS-C-linearis_contig96:639328..639790 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 639329..639790 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930819.3111303-UTR-C-linearis_contig96:639790..639954 | 1622930819.3111303-UTR-C-linearis_contig96:639790..639954 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 639791..639954 + |
| 1690881266.1729925-UTR-C-linearis_contig96:639790..639954 | 1690881266.1729925-UTR-C-linearis_contig96:639790..639954 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 639791..639954 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17058.1 >prot_C-linearis_contig96.17058.1 ID=prot_C-linearis_contig96.17058.1|Name=mRNA_C-linearis_contig96.17058.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=154bp
VARSRYRRHRQGSQNEERLRHTRHGGDKRGVNPPTPPCPASQCPASQGKI
RPKLTAVERPDFLRSSRTCNREDSIYTVPLFRERLMEGNRRGGMQQIPKE
GKGWSASPCCRVARPTKVTAKNKNATLTCVVVGPDAGGAFRGKVVCDAVG
RSF* back to topmRNA from alignment at C-linearis_contig96:639329..639954+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17058.1 ID=mRNA_C-linearis_contig96.17058.1|Name=mRNA_C-linearis_contig96.17058.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=626bp|location=Sequence derived from alignment at C-linearis_contig96:639329..639954+ (Chordaria linearis ClinC8C monoicous)
GTCGCACGGTCTCGGTACCGCCGACACAGGCAAGGTAGCCAAAACGAAGA
AAGGTTAAGGCACACGCGCCACGGCGGGGACAAGCGGGGCGTGAACCCCC
CAACACCGCCGTGCCCGGCTTCTCAGTGCCCGGCTTCTCAGGGGAAAATA
CGGCCGAAACTCACTGCTGTCGAGCGTCCCGACTTTCTACGGAGCTCCCG
GACCTGCAACAGGGAAGATTCGATTTACACCGTGCCCCTATTCAGGGAGC
GGCTCATGGAGGGGAACCGACGAGGAGGCATGCAACAGATACCAAAAGAG
GGGAAGGGCTGGTCGGCCTCTCCGTGTTGTCGCGTTGCACGCCCAACGAA
AGTCACCGCAAAAAACAAAAACGCGACCCTAACGTGTGTGGTTGTCGGGC
CAGATGCGGGGGGGGCCTTCCGCGGAAAGGTCGTCTGCGACGCAGTTGGT
CGTTCATTTTGAGCGGCGGCGCGGCCACTCGCGAGCGGTTGCGGGTCTTA
TCTACTGCGTTCAGAAGCCAGGTGGTGAAGAGTCGGGGGAACAGCAGCGT
ACACACAAAACGAGCACTTCTCACCTCGTCTGCGTGGCCGCCGAGCAACG
CCGTAACGGTCCTCGCCGCGTTCAGT back to topCoding sequence (CDS) from alignment at C-linearis_contig96:639329..639954+ >mRNA_C-linearis_contig96.17058.1 ID=mRNA_C-linearis_contig96.17058.1|Name=mRNA_C-linearis_contig96.17058.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at C-linearis_contig96:639329..639954+ (Chordaria linearis ClinC8C monoicous)
GTCGCACGGTCTCGGTACCGCCGACACAGGCAAGGTAGCCAAAACGAAGA
AAGGTTAAGGCACACGCGCCACGGCGGGGACAAGCGGGGCGTGAACCCCC
CAACACCGCCGTGCCCGGCTTCTCAGTGCCCGGCTTCTCAGGGGAAAATA
CGGCCGAAACTCACTGCTGTCGAGCGTCCCGACTTTCTACGGAGCTCCCG
GACCTGCAACAGGGAAGATTCGATTTACACCGTGCCCCTATTCAGGGAGC
GGCTCATGGAGGGGAACCGACGAGGAGGCATGCAACAGATACCAAAAGAG
GGGAAGGGCTGGTCGGCCTCTCCGTGTTGTCGCGTTGCACGCCCAACGAA
AGTCACCGCAAAAAACAAAAACGCGACCCTAACGTGTGTGGTTGTCGGGC
CAGATGCGGGGGGGGCCTTCCGCGGAAAGGTCGTCTGCGACGCAGTTGGT
CGTTCATTTTGAGTCGCACGGTCTCGGTACCGCCGACACAGGCAAGGTAG
CCAAAACGAAGAAAGGTTAAGGCACACGCGCCACGGCGGGGACAAGCGGG
GCGTGAACCCCCCAACACCGCCGTGCCCGGCTTCTCAGTGCCCGGCTTCT
CAGGGGAAAATACGGCCGAAACTCACTGCTGTCGAGCGTCCCGACTTTCT
ACGGAGCTCCCGGACCTGCAACAGGGAAGATTCGATTTACACCGTGCCCC
TATTCAGGGAGCGGCTCATGGAGGGGAACCGACGAGGAGGCATGCAACAG
ATACCAAAAGAGGGGAAGGGCTGGTCGGCCTCTCCGTGTTGTCGCGTTGC
ACGCCCAACGAAAGTCACCGCAAAAAACAAAAACGCGACCCTAACGTGTG
TGGTTGTCGGGCCAGATGCGGGGGGGGCCTTCCGCGGAAAGGTCGTCTGC
GACGCAGTTGGTCGTTCATTTTGA back to top
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