mRNA_C-linearis_contig96.17036.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig96.17036.1
Unique NamemRNA_C-linearis_contig96.17036.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A6H5L8F7_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8F7_9PHAE)

HSP 1 Score: 518 bits (1334), Expect = 2.170e-174
Identity = 260/366 (71.04%), Postives = 287/366 (78.42%), Query Frame = 1
Query:  751 YNAIELAKLSIAPGARLEDWRSRGSSTDYSSTLEKISVDDRLVVIDNGPRGTAVFGDNAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTAGTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEG---DFDLSAVEWFCRAGSGDGQ---GGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSVLPLFREAEREFARWGQPEGDDHAPEREEG 1830
            Y+  +LAKLSIAPGA+LEDW S  S T   +   +I+V +  V +  G     VF DN +RIPGS FA+DVHGDTLP  P VLTG LD WPA+ +    G SW+LQDLAARTAG +VSLDGGPSFAR+SMCAG  SL +Y+RY+E  S  D+APLYVFDP+ILGP STFCDDGSLV DAFDTP CFSRDAAAAVCDEK RPLPPKWLLVGA RSGT IHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLN DG + E    DFDLSA+EWFCRAGS DG+   G R L + A +I+QRPGEVVFLPIGWFHVVLNV  STALSMSLTLRRDLPSVLPLF EAEREFA WG+P  D    E E G
Sbjct:   45 YSETDLAKLSIAPGAKLEDWVSPDSDT--GTNKGEITVGENCVEVGIGAGKKNVFRDNVERIPGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASRET-GKSWTLQDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSEKESGKDSAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNFDGNSSEHEGEDFDLSALEWFCRAGSSDGEDPGGRRHLHKGAKVIIQRPGEVVFLPIGWFHVVLNVTASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNRDFDRQEAESG 407          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A1E7FI75_9STRA (Clavaminate synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FI75_9STRA)

HSP 1 Score: 334 bits (857), Expect = 4.260e-103
Identity = 176/311 (56.59%), Postives = 209/311 (67.20%), Query Frame = 1
Query:  910 VFGDNAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAF--NTPNLPGNSWSLQDLAAR-----TAGT----RVSLDGGPSFARLSMCAGKASLRDYQRYAEDS-SDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEG----DFDLSAVEWFCRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVET---STALSMSLTLRRDLPSVLPLFREAEREFARW 1785
            VF DN  RIPG +F  D+HGD+LP  PAVLTGLLD WP+F  N      +SWS++DLAAR     T  T    RVSLDGGPSFAR SMC GK +L +Y +Y +   +D D APLYVFDP+IL  ++ F +      D F  P CFS DA   +   + RPLPP WLLVG  RSGTPIHDHP TV WNALLVGCKLWCC PPDVDES LLLNL    +E     DFDLSA+EWF + G        ++ + A IIVQ PGEVV+LP GWFHVVLNV     +TA+S+SLTLRRDLP +LPL  E + +FA++
Sbjct:   87 VFRDNVIRIPGCSFKNDIHGDSLPHVPAVLTGLLDDWPSFSKNPEGTTTSSWSVEDLAAREVTKITTSTPTPPRVSLDGGPSFARQSMCQGKVTLEEYNQYCKSGEADNDVAPLYVFDPDILKSSTGFFES-----DEFSIPGCFSNDAMGCINGTEYRPLPPAWLLVGVKRSGTPIHDHPLTVGWNALLVGCKLWCCLPPDVDESLLLLNLPQDDDEDFDMTDFDLSALEWFKQCGGST----NKIPDCAKIIVQHPGEVVYLPAGWFHVVLNVAADSPTTAISVSLTLRRDLPVILPLLMEEDEDFAKF 388          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A7S3QEB2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB2_9STRA)

HSP 1 Score: 323 bits (827), Expect = 4.130e-98
Identity = 199/417 (47.72%), Postives = 229/417 (54.92%), Query Frame = 1
Query:  754 NAIELAKLSIAPGARLEDWRSRGSSTDYS---------------------STLEKISVDDRL-----------------VVIDNGPRGTAVFGDNAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAA--RTAG------------------------TRVSLDGGPSFARLSMCAGKASLRDYQRYAEDS-SDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGD----------FDLSAVEWFCRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSVLPLFREAEREFA 1779
            +AI+ AK SIAP A L+DW S  S+   +                     S      VDD +                 V  DNG     V+ DN  RIPG +F  DVHGD+LP  PAVLTGL+D W A   P     S+S  D AA   T G                         RVSLDGGPSFAR+SM  GK +L +Y+ Y E   +  D APLYVFDP++L   STF  D     D F  P CFS D  A +   + RPLPP WLLVG  RSGTPIHDHP TVAWNALLVGCKLWCC PPDVDES LLLNL                  FDLSA+EWF + G        +L ESA IIVQRPGEVV+LP GWFHVVLNVETSTA+S+SL LRRDLP +LPL  E++ +FA
Sbjct:   18 SAIDRAKKSIAPRAELKDWLSDSSAVSSAXXXXXXXXXXXXXXXXXXGDDSIQVHSHVDDDVSCHAXXXXXXXXXXXXAVTFDNGG-AQLVYRDNVTRIPGCSFTHDVHGDSLPHVPAVLTGLMDDWLAVLRPF----SFSNADPAAGSSTGGXXXXXXXXXXXXXXXXGSTSIFKTARVSLDGGPSFARMSMGQGKVTLEEYKHYCESGEASKDIAPLYVFDPDVL--KSTFASDN----DEFHVPECFSNDVMACIDGTEYRPLPPAWLLVGVKRSGTPIHDHPLTVAWNALLVGCKLWCCLPPDVDESLLLLNLHDDXXXXXXXXXXXXXXXFDLSALEWFRQCG--------KLPESAKIIVQRPGEVVYLPAGWFHVVLNVETSTAISVSLALRRDLPVILPLLMESDEDFA 415          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A813J9B4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9B4_POLGL)

HSP 1 Score: 278 bits (710), Expect = 2.560e-82
Identity = 166/359 (46.24%), Postives = 198/359 (55.15%), Query Frame = 1
Query:  754 NAIELAKLSIAPGARLEDWRSRGSSTDYSSTLEKISVDDRLVVIDNGPRGTAVFGDNAQRIP---GSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAAR-TAGTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFDLSAVEWFCRAGSG----------DGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSV-LPLFREAEREFARW 1785
            N +  AK  +   A    W + G +  +   L + + D R V + +  RGTA F DN +R+P   G  F  DV GD LP  P VL G  D W A       G  WS++ LA R T G   SLDGGP  AR SM     S+ +Y RY  +  + D APLY+FDP IL  T  F  +G+++   +  P CFS+D   A+   + RPLPP WLLVGAARSGTPIHDHP   AWN+LL GCKLW  FPPDVDE  LLL+     E  D+DLSAVEWF     G          D    R L     IIVQ PGE VFLP GW+HVVLN+ TSTA+S SL LRRD     L LF E E     W
Sbjct:    8 NGVANAKRRLVGDADDNVWHATGIARSF---LAEEAEDGRSVTLRSSSRGTACFRDNTERVPFVHGETF--DVSGDDLPDKPCVLQGCCDSWHAM----ADGRHWSVESLAERCTEGDVFSLDGGPGLARNSMSEASVSMLEYLRYCSEDGESDDAPLYIFDPCIL--TRAFR-EGTMLSSEYTVPHCFSQDKMGAITGSQYRPLPPAWLLVGAARSGTPIHDHPLNAAWNSLLDGCKLWVIFPPDVDEGFLLLD-----EGEDYDLSAVEWFLWWAGGLASADDCSTEDSLAKRLLPSQTKIIVQHPGETVFLPPGWWHVVLNIRTSTAISYSLALRRDYERHWLALFEEDEAFAVFW 349          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A7S2CZM5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZM5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.340e-67
Identity = 148/333 (44.44%), Postives = 172/333 (51.65%), Query Frame = 1
Query:  904 TAVFGDNAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGN-------------SWSLQDLAARTAGTR---VSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNL------------DGGAE------------EGDFDLSAVEWFCRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETST-ALSMSLTLRRDLPSVLPLFREAEREFA 1779
            T  F DN +R   S    + +GD LP  PAV TG+ D WPA   P   G+             SWS+  LAAR  G      S+DGGP FARLS+   +  +  +  Y E+  DGD APLY+FDP +   T TF  DG+   D F  P CF+ D  A +     RPLPP WLLVG  RSGTPIHDHP TVAWN LL G KLW C PPDVD   LLL              DG AE            E  FDL A+ WF          G  L + A +IVQR GEVVF+P GW+HVVLN   ST ALS S+ LRRD     P   E + E A
Sbjct:   12 TCRFVDNVERTAFSPGLFNRYGDDLPEVPAVFTGVGDDWPAAR-PVTGGSATAEACVVPFATSSWSVASLAARGCGANDRHFSVDGGPGFARLSLADARVGIDHFAAYCENDGDGDLAPLYIFDPALA--TRTFA-DGTPYCDEFGVPECFTHDTMAGLQGSIFRPLPPAWLLVGPRRSGTPIHDHPHTVAWNVLLDGTKLWVCLPPDVDPIFLLLGAGQERGRGSSGDEDGSAEGKAGVEQNEEDEEEGFDLEAIAWFESWSK-----GTLLPKGACVIVQRAGEVVFVPAGWWHVVLNCSASTTALSHSIGLRRDFAKTWPSLVEEDPEMA 335          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A7S2XR54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR54_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.730e-59
Identity = 110/208 (52.88%), Postives = 135/208 (64.90%), Query Frame = 1
Query:  919 DNAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTA-GTRVSLDGGPSFARLSMCAGKASLRDYQRYA-------EDSSDG-------DAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESAL 1497
            DN QR+P S F    HGD LP  PAVLTG  D W AF++P   G +WS+ DLA R     +++LDGGP FAR+SM AGK S+ +Y+RY         D++D        D APLY+FD ++L   S F +   ++ D    PPCF+ D  A +   + RPLPP WLLVGAARSGTP+HDHP  VAWNALLVGCKLWCCFPP+VDES L
Sbjct:    2 DNVQRVPSSQFER--HGDHLPYEPAVLTGCCDDWHAFSSP---GQTWSVSDLAHRLEPDMKLNLDGGPYFARMSMNAGKVSMSEYERYCYADTTPTTDANDACHDCAAMDIAPLYLFDADVLN--SKFANGQPVMDDLNGLPPCFAEDTMAPLTGSRFRPLPPAWLLVGAARSGTPMHDHPFFVAWNALLVGCKLWCCFPPNVDESVL 202          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: F0YH78_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH78_AURAN)

HSP 1 Score: 200 bits (509), Expect = 8.020e-54
Identity = 135/332 (40.66%), Postives = 166/332 (50.00%), Query Frame = 1
Query:  757 AIELAKLSIAPGARLEDWRSRGSSTDYSSTLEKISVDDRLVVIDNGPRGTAVFGDNAQR--IPGSAFAEDVHG-DTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTAG-TRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAV---CDEKLRPLPPKWLLVGAARSGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFDLSAVEWFCRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRD 1731
            +I  AK ++A  A    WR R          E++ +D        G R   +  D A R  +  SA  +   G    P+ PAV+ GL+D WP           WSL  LAAR  G T + +DGGP  AR S+ + + S   Y  YA++   GD APLYVFD           +  +L G     PPC + DA   +    DE  RPLP  WLL GAARSGTP+HDHP T A+  LL GCKLW   PP  D S  L    GG    D+DLSA +WF R   G   G R       I VQ+P EVVF+P GW+HVVLN   + ALS SL L RD
Sbjct:   33 SIAAAKRTLAGPASPATWRPR-------RLAERLDID-------VGARRVTLRLDGAARDFVDASARVDGSEGLAACPKEPAVVAGLVDGWPGV------AGDWSLAGLAARVGGATPLEVDGGPWEARASLSSARVSAAAYAAYAKNGGGGDDAPLYVFDA---------AERAALAG-LGPPPPCLADDALPRLLGCADEAKRPLPRGWLLAGAARSGTPVHDHPLTCAYVVLLSGCKLWAVLPPGTDRS-FLFPTSGG----DYDLSAADWFLRWDRGPPPGAR-------IFVQQPREVVFVPAGWWHVVLNASDNVALSRSLALERD 322          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A109FP01_9BASI (Clavaminate synthase-like protein (Fragment) n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A109FP01_9BASI)

HSP 1 Score: 130 bits (326), Expect = 1.140e-28
Identity = 88/270 (32.59%), Postives = 130/270 (48.15%), Query Frame = 1
Query:  973 TLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTAGTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPT-TVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFDLSAVEWFCRAGSGDGQ--GGRQLDESATIIVQ----RPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSVLPLFRE 1761
            TLP  P +LT L+  WPA +  +     W+L  LA R        +           A   +L DY RY  D+   D +PLY+F+   +  T+    +G  +GD +  P CFS D    +  E  RP   +WL+ G  RSG+  H  P  T AWNA+ VG K W  FPPDV    +  + DG   E    LS  EWF        +  G R  D +    ++    R GE++++P GW+H+V+N+  + A++ +    R+LP+VL   R+
Sbjct:  151 TLPHEPVILTDLMSDWPAMSESS--SRRWTLAHLAKRFPNIAFRAE-----------ATLTTLPDYTRY-HDNCAQDESPLYLFESEFVNKTANL--EGPSLGDDYSVPTCFSEDLFEVMGTE--RP-DYRWLIAGPTRSGSTWHVDPNHTSAWNAVTVGEKAWIMFPPDVTPPGVYASEDGAQVEAP--LSLAEWFLSYYEHAKRVYGPRTTDSATRGKMREGICRAGEILYVPSGWWHIVVNLTPAIAVTQNYVSHRELPAVLRFMRD 399          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: J0LEK9_AURST (Clavaminate synthase-like protein n=1 Tax=Auricularia subglabra (strain TFB-10046 / SS5) TaxID=717982 RepID=J0LEK9_AURST)

HSP 1 Score: 129 bits (324), Expect = 1.640e-27
Identity = 97/330 (29.39%), Postives = 153/330 (46.36%), Query Frame = 1
Query:  922 NAQRIPGSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTAGTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDG----DAAPLYVFDPNILGPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHP-TTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFDLSAVEWF----CRAGSGDGQGGRQLDESATII--VQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSVLPLFREAEREFARWGQPEGDDHAPEREEGGE*RTLFPLYARVVAS 1878
            +A+ +  +AFA +      P  P +LT L+D+WP     +   +SW L  LA R A      +           A +  ++ Y RY      G    D +PLY+FD   +  T      GS +GD F+ P  F  D    +  +  RP   +WL+VG +R+G+  H  P +T AWNA++ G K W  FPPD+    + ++ D    E    LS  EWF      A +  G   R       +I  V R GEV+++P GW+H+V+N+E+  A++ +     +LP+VL   R+   + + +      D A E  +  +      +YAR  A+
Sbjct:  215 DARTLDSAAFARNF---AQPSTPVILTSLIDYWPCTRLQS--DSSWDLGALAQRFADVAFRAE-----------AAQVPMKVYARYCASIERGAGAVDESPLYLFDAEFVRRT------GSAMGDEFEVPAIFGEDLFRIMGAQ--RP-DHRWLIVGPSRAGSTWHKDPNSTSAWNAVITGAKGWVLFPPDIPPPGVFVSEDEA--EVTAPLSLAEWFNNYSAHALATYGPNARDPATRGKMIQGVCRAGEVMYIPAGWWHIVVNLESCVAVTQNFVSETELPAVLRFMRDKPEQVSGFKL----DAAQEEADDDDADAKCDVYARFCAA 513          
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Match: A0A238FDJ6_9BASI (BQ2448_4604 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FDJ6_9BASI)

HSP 1 Score: 129 bits (324), Expect = 1.680e-27
Identity = 93/290 (32.07%), Postives = 138/290 (47.59%), Query Frame = 1
Query:  955 EDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTAGTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNILGPTSTFCDDGSL---VGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAARSGTPIHDHPT-TVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFDLSAVEWF------CRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVETSTALSMSLTLRRDLPSVLPLFREAEREFARWGQP 1794
            +D+    LP+ P +LT L+  W A  T     + W+L  LA R   T    +           A   +L DYQ Y  D  + D +PLY+FD   +  T  F D+  +   +G  ++ P CF  D  A +  E  RP   +WL+VG  RSG+  H  P  T AWNA+  G K W  FPP V    + ++ D G  E    LS  EWF           G       L  +  + + R GEV ++P GW+H+V+N+E S A++ +   +R+LPSVL   R+   + + + +P
Sbjct:  217 KDLLPSDLPQEPCILTDLMTTWAA--TDRTSPHQWTLSRLAKRFPKTLFRAE-----------ATLTTLPDYQTY-HDRCEMDESPLYLFDSEYVRKTQ-FVDEQGVDQGLGRDYEVPECFREDLFAVMRHE--RP-DYRWLIVGTTRSGSTWHQDPNGTSAWNAVTTGSKAWIMFPPSVTPPGVHVSEDQGQVEAPLALS--EWFMSYWDFANMTYGPKAKDGALRNTMKVGICREGEVFYVPSGWWHIVVNLEPSIAVTQNYVSQRELPSVLQFMRDRPDQVSGFKRP 486          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8F7_9PHAE2.170e-17471.04JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1E7FI75_9STRA4.260e-10356.59Clavaminate synthase-like protein n=1 Tax=Fragilar... [more]
A0A7S3QEB2_9STRA4.130e-9847.72Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A813J9B4_POLGL2.560e-8246.24Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S2CZM5_9STRA1.340e-6744.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XR54_9STRA1.730e-5952.88Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
F0YH78_AURAN8.020e-5440.66Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A109FP01_9BASI1.140e-2832.59Clavaminate synthase-like protein (Fragment) n=1 T... [more]
J0LEK9_AURST1.640e-2729.39Clavaminate synthase-like protein n=1 Tax=Auricula... [more]
A0A238FDJ6_9BASI1.680e-2732.07BQ2448_4604 protein n=1 Tax=Microbotryum intermedi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:233698..236235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score513.8
Seed ortholog evalue7e-143
Seed eggNOG ortholog2880.D7G489
KEGG rclassRC00279
KEGG koko:K00804,ko:K11323
KEGG ReactionR01658,R02003,R02061
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00367
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-02_001750.1
EC2.5.1.1,2.5.1.10,2.5.1.29
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03036
Exons1
Model size2538
Cds size1200
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17036.1prot_C-linearis_contig96.17036.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig96 234337..235536 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930823.449648-UTR-C-linearis_contig96:233697..2343361622930823.449648-UTR-C-linearis_contig96:233697..234336Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 233698..234336 +
1690881268.2201796-UTR-C-linearis_contig96:233697..2343361690881268.2201796-UTR-C-linearis_contig96:233697..234336Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 233698..234336 +
1622930823.5233834-UTR-C-linearis_contig96:235536..2362351622930823.5233834-UTR-C-linearis_contig96:235536..236235Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 235537..236235 +
1690881268.2498345-UTR-C-linearis_contig96:235536..2362351690881268.2498345-UTR-C-linearis_contig96:235536..236235Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 235537..236235 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930823.4660392-CDS-C-linearis_contig96:234336..2355361622930823.4660392-CDS-C-linearis_contig96:234336..235536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 234337..235536 +
1690881268.2361822-CDS-C-linearis_contig96:234336..2355361690881268.2361822-CDS-C-linearis_contig96:234336..235536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 234337..235536 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig96.17036.1

>prot_C-linearis_contig96.17036.1 ID=prot_C-linearis_contig96.17036.1|Name=mRNA_C-linearis_contig96.17036.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=400bp
MEHSDAPVAVAVGLAGKASDTGDSSHDPAEPREHSSSYNAIELAKLSIAP
GARLEDWRSRGSSTDYSSTLEKISVDDRLVVIDNGPRGTAVFGDNAQRIP
GSAFAEDVHGDTLPRFPAVLTGLLDHWPAFNTPNLPGNSWSLQDLAARTA
GTRVSLDGGPSFARLSMCAGKASLRDYQRYAEDSSDGDAAPLYVFDPNIL
GPTSTFCDDGSLVGDAFDTPPCFSRDAAAAVCDEKLRPLPPKWLLVGAAR
SGTPIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLDGGAEEGDFD
LSAVEWFCRAGSGDGQGGRQLDESATIIVQRPGEVVFLPIGWFHVVLNVE
TSTALSMSLTLRRDLPSVLPLFREAEREFARWGQPEGDDHAPEREEGGE*
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mRNA from alignment at C-linearis_contig96:233698..236235+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17036.1 ID=mRNA_C-linearis_contig96.17036.1|Name=mRNA_C-linearis_contig96.17036.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2538bp|location=Sequence derived from alignment at C-linearis_contig96:233698..236235+ (Chordaria linearis ClinC8C monoicous)
AACGAATTTGGGAAAAAAACTCGCATTCGTCGGGATTCGAACCCATGACC TGGTTTCTAGTAGGTTTGCGTGGTTACCTACTGCACTACCGGGGCGCGGC TGTGTGTAGTACTCTTAATACACCGCAACGTGTAGTACATGTCTCGCCTT GATCGGAAAGGGACTGTCGCCAAAATAAATGGGACGAAAACACACACACA TTCAAACAACACCTTGAGGAAAATTGAAAGTTCCATGCGTGCTCGGGGTG AGTGACTGGCTTATTGTTCTTCTTCCTGAAGAAGTGCGTAGTCTACATGT ACATGGTAGATCTACAAGAAAACAACGGTCTGTGTGCAGACTTGAAGCCA TAGAGGGAAATAACGCAATACGGATGTTTTTAACGGCGAAGACGATTGCT CAGCTGCAGCTCACCTCCAATTTCAATGCTTCTGGATTGTACGGTCATGT TTCTCTCACCCATTCAACCCAATTTTTTCCCTCCTCCACACTGCTTGGTG CCAACCACCCCGGGAAAAAGCGACAGGCGAACCAACATCGCCAGCATCCT CGCCTCCCGCTCTTGCACAAGCGACGTCTCGCCGAGGTCCTCCAAGTGCT CTTGTTGCATGAAAGAAAGGCCAGAGATCGCCCGCAGCAATGGAACACTC CGACGCTCCTGTTGCTGTCGCGGTTGGGCTTGCTGGCAAGGCTTCAGATA CCGGCGACTCCAGTCATGATCCGGCAGAACCGCGGGAACACAGCAGTAGT TACAACGCGATTGAGCTAGCCAAACTCTCGATTGCTCCCGGAGCAAGACT GGAGGATTGGAGAAGCCGAGGAAGTAGCACGGATTACAGCAGCACGCTGG AGAAAATTTCGGTGGACGATCGGCTCGTCGTCATCGACAACGGGCCAAGG GGAACGGCCGTTTTTGGCGACAACGCGCAGAGAATACCTGGTTCGGCGTT CGCCGAAGACGTGCACGGAGACACCTTGCCCCGCTTCCCGGCCGTCCTGA CGGGCCTACTGGACCATTGGCCGGCCTTCAACACGCCCAACCTCCCCGGA AACTCGTGGAGCCTGCAAGACTTAGCGGCTCGCACCGCGGGCACCAGGGT GTCCTTAGACGGCGGCCCTTCGTTCGCCCGGCTCTCCATGTGCGCCGGCA AGGCGAGCCTGAGGGACTACCAGCGCTACGCGGAGGACTCGTCGGACGGC GACGCCGCCCCGCTGTACGTGTTCGACCCCAACATCCTGGGGCCGACCTC CACCTTCTGCGACGATGGGAGCCTCGTCGGGGACGCCTTCGACACGCCCC CGTGCTTCTCCCGCGACGCCGCCGCCGCGGTCTGCGACGAGAAGCTCCGC CCGCTCCCCCCGAAGTGGCTCCTGGTCGGGGCCGCCCGCAGCGGGACCCC GATCCACGACCACCCGACCACGGTCGCCTGGAACGCGCTGCTCGTGGGGT GTAAGCTGTGGTGCTGCTTCCCGCCGGACGTGGACGAGAGCGCGTTGCTC CTTAACCTGGATGGGGGCGCGGAGGAGGGAGATTTCGACCTGTCGGCCGT GGAGTGGTTTTGTCGAGCTGGTTCCGGCGACGGCCAGGGGGGACGGCAGC TGGACGAGAGCGCCACCATCATCGTTCAACGCCCGGGCGAAGTCGTGTTT CTGCCCATCGGGTGGTTTCATGTCGTGCTCAACGTCGAAACCAGCACGGC GCTCAGCATGAGCTTGACGCTGCGACGGGATCTGCCGTCGGTTCTCCCTT TGTTTCGGGAGGCGGAGCGAGAGTTTGCGCGTTGGGGTCAACCCGAAGGT GACGATCATGCACCGGAACGGGAAGAGGGGGGCGAGTAACGGACGTTGTT CCCTCTCTACGCGCGGGTTGTAGCATCGTCAACTACAATGGCGGCAGGCG GGCTAAATTTATCCTTTCATTGTTTCAGGGACGTTCCACGACGGCGCTTG GTTGTCGGAGCGCCGGAAAACGTGGTCACGTTCGCGACTGTTACCTAGTA GAGCCCGTGAATCTAGACAATTTTAGTGCTTTTGCCATCAAGAAGCGGGG GGGCACGGTGTAGTCTATCTCAAGGGTCCAGTCTACATCGGGGTGACAAA ATGAAGTGATTTCTGCGTGTGAGATTTGATTGTACTTTTGGAGGGAACAC AAACGAATGGGTGCGCGTTTTAGCGGTTGTCGTCGAACAGAGAGATCGGC GGGTCAAATGGTTTTACTGTCGACATATTTCCTGTCCTTGCCGGGGAGGA CGGTAAGACGGCCTGCGGCGTAAGGACGTTTTGCGAGAAAGGGGACGCGT CAGACGGTGTACAGCGAAAAAAGCACCAATGAGGATGGTATTATTGAGGA ACGCTAATATCGTCTGCCTAAAACCAAAAAATGCTTGTTTACTTGAAAAT GTATGAATTAATTAAATTTGGCTCTGAATGTATCTAGGAAGAGCCATACG TGCATCCGTGACCGGACGACTTGCAAACGGCAGCATTGGTATGTATGTAT GTACGCTACCTACAGAGAGAGAGAGAAAAGGTGGCCGC
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Coding sequence (CDS) from alignment at C-linearis_contig96:233698..236235+

>mRNA_C-linearis_contig96.17036.1 ID=mRNA_C-linearis_contig96.17036.1|Name=mRNA_C-linearis_contig96.17036.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2400bp|location=Sequence derived from alignment at C-linearis_contig96:233698..236235+ (Chordaria linearis ClinC8C monoicous)
ATGGAACACTCCGACGCTCCTGTTGCTGTCGCGGTTGGGCTTGCTGGCAA
GGCTTCAGATACCGGCGACTCCAGTCATGATCCGGCAGAACCGCGGGAAC
ACAGCAGTAGTTACAACGCGATTGAGCTAGCCAAACTCTCGATTGCTCCC
GGAGCAAGACTGGAGGATTGGAGAAGCCGAGGAAGTAGCACGGATTACAG
CAGCACGCTGGAGAAAATTTCGGTGGACGATCGGCTCGTCGTCATCGACA
ACGGGCCAAGGGGAACGGCCGTTTTTGGCGACAACGCGCAGAGAATACCT
GGTTCGGCGTTCGCCGAAGACGTGCACGGAGACACCTTGCCCCGCTTCCC
GGCCGTCCTGACGGGCCTACTGGACCATTGGCCGGCCTTCAACACGCCCA
ACCTCCCCGGAAACTCGTGGAGCCTGCAAGACTTAGCGGCTCGCACCGCG
GGCACCAGGGTGTCCTTAGACGGCGGCCCTTCGTTCGCCCGGCTCTCCAT
GTGCGCCGGCAAGGCGAGCCTGAGGGACTACCAGCGCTACGCGGAGGACT
CGTCGGACGGCGACGCCGCCCCGCTGTACGTGTTCGACCCCAACATCCTG
GGGCCGACCTCCACCTTCTGCGACGATGGGAGCCTCGTCGGGGACGCCTT
CGACACGCCCCCGTGCTTCTCCCGCGACGCCGCCGCCGCGGTCTGCGACG
AGAAGCTCCGCCCGCTCCCCCCGAAGTGGCTCCTGGTCGGGGCCGCCCGC
AGCGGGACCCCGATCCACGACCACCCGACCACGGTCGCCTGGAACGCGCT
GCTCGTGGGGTGTAAGCTGTGGTGCTGCTTCCCGCCGGACGTGGACGAGA
GCGCGTTGCTCCTTAACCTGGATGGGGGCGCGGAGGAGGGAGATTTCGAC
CTGTCGGCCGTGGAGTGGTTTTGTCGAGCTGGTTCCGGCGACGGCCAGGG
GGGACGGCAGCTGGACGAGAGCGCCACCATCATCGTTCAACGCCCGGGCG
AAGTCGTGTTTCTGCCCATCGGGTGGTTTCATGTCGTGCTCAACGTCGAA
ACCAGCACGGCGCTCAGCATGAGCTTGACGCTGCGACGGGATCTGCCGTC
GGTTCTCCCTTTGTTTCGGGAGGCGGAGCGAGAGTTTGCGCGTTGGGGTC
AACCCGAAGGTGACGATCATGCACCGGAACGGGAAGAGGGGGGCGAGTAA
ATGGAACACTCCGACGCTCCTGTTGCTGTCGCGGTTGGGCTTGCTGGCAA
GGCTTCAGATACCGGCGACTCCAGTCATGATCCGGCAGAACCGCGGGAAC
ACAGCAGTAGTTACAACGCGATTGAGCTAGCCAAACTCTCGATTGCTCCC
GGAGCAAGACTGGAGGATTGGAGAAGCCGAGGAAGTAGCACGGATTACAG
CAGCACGCTGGAGAAAATTTCGGTGGACGATCGGCTCGTCGTCATCGACA
ACGGGCCAAGGGGAACGGCCGTTTTTGGCGACAACGCGCAGAGAATACCT
GGTTCGGCGTTCGCCGAAGACGTGCACGGAGACACCTTGCCCCGCTTCCC
GGCCGTCCTGACGGGCCTACTGGACCATTGGCCGGCCTTCAACACGCCCA
ACCTCCCCGGAAACTCGTGGAGCCTGCAAGACTTAGCGGCTCGCACCGCG
GGCACCAGGGTGTCCTTAGACGGCGGCCCTTCGTTCGCCCGGCTCTCCAT
GTGCGCCGGCAAGGCGAGCCTGAGGGACTACCAGCGCTACGCGGAGGACT
CGTCGGACGGCGACGCCGCCCCGCTGTACGTGTTCGACCCCAACATCCTG
GGGCCGACCTCCACCTTCTGCGACGATGGGAGCCTCGTCGGGGACGCCTT
CGACACGCCCCCGTGCTTCTCCCGCGACGCCGCCGCCGCGGTCTGCGACG
AGAAGCTCCGCCCGCTCCCCCCGAAGTGGCTCCTGGTCGGGGCCGCCCGC
AGCGGGACCCCGATCCACGACCACCCGACCACGGTCGCCTGGAACGCGCT
GCTCGTGGGGTGTAAGCTGTGGTGCTGCTTCCCGCCGGACGTGGACGAGA
GCGCGTTGCTCCTTAACCTGGATGGGGGCGCGGAGGAGGGAGATTTCGAC
CTGTCGGCCGTGGAGTGGTTTTGTCGAGCTGGTTCCGGCGACGGCCAGGG
GGGACGGCAGCTGGACGAGAGCGCCACCATCATCGTTCAACGCCCGGGCG
AAGTCGTGTTTCTGCCCATCGGGTGGTTTCATGTCGTGCTCAACGTCGAA
ACCAGCACGGCGCTCAGCATGAGCTTGACGCTGCGACGGGATCTGCCGTC
GGTTCTCCCTTTGTTTCGGGAGGCGGAGCGAGAGTTTGCGCGTTGGGGTC
AACCCGAAGGTGACGATCATGCACCGGAACGGGAAGAGGGGGGCGAGTAA
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