mRNA_C-linearis_contig96.17031.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: D7G483_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G483_ECTSI) HSP 1 Score: 1667 bits (4318), Expect = 0.000e+0 Identity = 1040/1722 (60.39%), Postives = 1169/1722 (67.89%), Query Frame = 1 Query: 1 AMTMSVVEDGRWANSDIFHEPTDPDMVEYLGRKRESLQNQVVNVAGGMSIGPALYLWTHRLTNADVVSVVTTARPFTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRRSPFDGSLGGIKGG---PVPNHRTSDKWTMLPLSEETGT--GLMALKGGRADSELRKLRKEKRLRAPLQLPLFTSPLEADRTGNGKVHNRMSQCLVAERDRFMELLSKERQDRVHLEAFACSLVQAAYRGYLLRKRWAEVDARQRVQLRVRKSLREFLKSKGAPFALGAVEKQQTEDRLRRTAACTIQGYFRCFLARQTLGKRRMASFLLKRRRAARTLQCWERNLFALRRLRITSHRRRVVHSIAASMIQGQWRLRKVRIQEVVRARLFRSAAAIQRIARGYVARKKIARQLTRVRALSRVRAAYTLQKFIRRAQARRRVHRLRGRRRRGACARATLHAQRVCRGFVGRRRAAARKKAAKIDIWWAARQAGNASQVDALYYGQGLGGVIFDCLNTRDAEGNSLLAAVAGGAGPVSLVRVVLKWGADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLKDGRQGKSLLHEAAALGLHHLTAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPVVKNDKGQVPAVVAMLHGHTSTAKTLFKAFSASKTAPKRSRAIDTMAAIAHAAAMTYSSETNPPAGAAATENGNPRQGRCDARFRPSFADSGGAG-----GRGIVTLAVGALAAADGF--PASASASGGAGEAVEKNALLGGGMGLDGSTV--ATSVGADQLAVPGSSGXXXXXXXXXXXXXXXXXREGQDGGSQSFAGAGREDSGGGASVASNAGSRVS-SLANLTRRTSEAGVAVDLDASTLEDLVPHSWDDDDIRCAISLAEEGEVWCLASLFALGLDPCCRHPNSGDTIGIAATRGGHRETLEVCLETGVPFAAKNNEGRSALHAAVVRGDLEVAALLLVNPGLSGLEVDDLCDQDEGGRTPLHEMAIRGEAPTVLLLAAETDSEWTCSSARSGGAGRGNTSLNT-SSGGDXXXXXXXXXXXXXTKTGDRSGGSSDDVSSRGEKDGDGDRGXXXPARPXXXXXXXXXASLNIVADADAGAERAAADTRPIGGAAGGEAGGCAPAPSAVRSPLPLSSFAAPSLADTEELRDHRRHQRASTNPSRGGRAASTVQVESGRDGTGSRKSMVDDQSALNGANGTGEADDDSNGIISGGCGASADNAG-----------LGESEEEDEVSGWGGLLDVGVRCAGSGNCPLHEAAASGSVGAVLSLLDLGADASIVNGCGDTALHMAVGPEAPRDYDDEGRQCFRSAFAFASTSTSTPATSCPPWHIHPDLTSCKQASIDQRESRRTRRPCFLVSSRYFSRLFAHFPMYQVVTALLRRGADPTMKDGLGRTAAMCAVMVGRAGALRELRKAARLWPPRSKDREQQELSGLGRVAISEGHVACLRVITDGCSEQDVLSWVDEEGVPALGLAVTHGRRECIDILLKGASPTSACGS---RDDGNTVLHVTAMTRGGVPVLKRLMSSKGGGEPFDLGWLEWRNGSGDTVLMAALRAGRHAAALLLLQALAVPTAAAHTFRYAWVIAAALSFAELCPCPSCVLGRTAEERARLCSKVVSKPARPGELRAGASINSPSNAGASTAAKRR 5076
AM+ SV E+G W +SDIF EPTDP+M+ YLGRKRESLQN+VVNVA GMSIGPALYLWTHRLT ADVVSVVTT RP TS R PFDGS G ++GG P+ R S KWT+LP ++E G MA+KGG+ D+ELR+LR EK LRAPL LPLFTSPLE D TG+GKVH+RMS+CL+AER+RFMELL KERQ+RVHLEAFACSLVQAA+RGYLLRKRWAEVDARQRV+LRVRK LR+FLKS+GAPFALGA+EKQQ EDRLR+ AACTIQ FRCFLARQTLGKRR+ASFLL+RRRAARTLQCW R LFA RRLR+T HRRRVVHSIAASMIQ QWRLRK IQEV ++RLFRSAAAIQRI RGYVA KK+ RQLTRVR L + RA YTLQKFIRRAQAR+RV G ARA LH QRVCRGFVGRRRAAARKKA +DIW AAR+ GNAS+VDALYYGQGLGGVIFDCLNT+D EGNSLLA VA G GP++L+RVVLKWGADVNSVN RGESAL+LAMS+RNVEVVDLL NHP+IRL + GKS+LHEAAALGLHHL+AQLVSKGLDV+ VDP+NGWTPV CATNLLEN+ASPVVKN+KGQVPAVVAMLHGH ST K L +AFSA++TA KRSR ID AA+A A+ +T++ E P A EN R G +P GAG G G+V L +G P ASA V + A++G G G D +T A S D+ G + G G S G GR G SV SNA SR S SL L+RR S+AGVA+DL+ LEDLVP WDDDDIRCA++LAE GE WCLASLFALGLDP C+HP+SGDTIGIAA RGG RETLEVCLETGV FA KN GRSALHAAVVR DLEVAALLL NPGLSG+EVDDLCD DE GRTPLHEMA RGEAPTVLLLA E DSEWT + G GN SL+T S XXXXXXXXX G G AR VAD + G A I A A PA S+VRSPLPLS+F APSLADTEELRD R H TN + V +++GR G+ S + V+ +S+L A + D + SGG +D+ G E EE D+ SGWGGLL+V VRC+GSGNCPLHEAAASG VGAVLSLLDLGAD S+ NGCGDTALH+AVGP APRD DEG ASTS ST +T+ P + T+ S D+R S + L P QVVTALLRRGADP+ K+ LG+TAAMCAV+ GRAGALRE+RKA L SK +EQ+ELS LG +AI EGHV CLRV+T+ CSEQ+VL+W DEEGVPAL LAV G+RECIDILLKG SPT++CG NTVLHVTAM RGGVPVLKRLMS KGGGEPFDLGWLE+RNG GDTVLMAALRAGRH+AALLLLQALAVPTAAAHTFRYAWVIAAAL AELCPCPSCVLGRTA+ERARLCSK+ KP RPGE G+ N S+AGAS AA R
Sbjct: 12 AMSASVGEEGPWGHSDIFREPTDPEMIAYLGRKRESLQNEVVNVAQGMSIGPALYLWTHRLTGADVVSVVTTTRPSTSASTTTTHKTKYSAGGGLPVGSVDGGRGVLR--------RGPPFDGSFGRLEGGGKMPL-QRRASAKWTILPKNKEASGEGGFMAVKGGKTDAELRRLRNEKNLRAPLHLPLFTSPLEVDPTGSGKVHDRMSECLMAERERFMELLGKERQERVHLEAFACSLVQAAFRGYLLRKRWAEVDARQRVRLRVRKCLRDFLKSRGAPFALGALEKQQKEDRLRQAAACTIQASFRCFLARQTLGKRRLASFLLRRRRAARTLQCWGRYLFASRRLRVTGHRRRVVHSIAASMIQQQWRLRK--IQEVTKSRLFRSAAAIQRIVRGYVAWKKVGRQLTRVRGLRKTRAVYTLQKFIRRAQARQRVXXXXXXXXXGTRARAALHVQRVCRGFVGRRRAAARKKATTLDIWRAARE-GNASRVDALYYGQGLGGVIFDCLNTKDPEGNSLLAKVASGVGPIALIRVVLKWGADVNSVNIRGESALQLAMSRRNVEVVDLLVNHPNIRLNQDQPGKSILHEAAALGLHHLSAQLVSKGLDVNGVDPQNGWTPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXCATNLLENNASPVVKNNKGQVPAVVAMLHGHASTGKKLLQAFSAAETASKRSRTIDAFAAVAMASGVTHAVE--PVVDADKDEN---RSGGRQGSEKP------GAGXXXXXGDGLVGL--------EGITTPEVASAD------VAEPAVVGEG-GSDHNTPDDAGSARGDRGLGAADGGASELQGGRPHSATTVGEKAGSTGSDASVDGGGR--GGDAVSVQSNASSRASASLEALSRRASKAGVAMDLNVIMLEDLVPRHWDDDDIRCAVALAERGEAWCLASLFALGLDPDCQHPDSGDTIGIAAARGGDRETLEVCLETGVSFATKNRRGRSALHAAVVRDDLEVAALLLANPGLSGIEVDDLCDPDEDGRTPLHEMAARGEAPTVLLLATEADSEWTTGGSGGAATGSGNASLDTRSEDASSAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGGVGGENGARMGSGSSIPVSGGDTGVADGNTG--DGAKRMSDIAAVASAAAAPDTPATSSVRSPLPLSAFVAPSLADTEELRDLRHHHHDVTNAAGKAERPEGVAMDTGRAGSTSTSTNVNSRSSL--ARKASSSGDTRDTARSGGN--HSDDGGDXXXXXGGREVRSEGEEGDDPSGWGGLLEVDVRCSGSGNCPLHEAAASGKVGAVLSLLDLGADVSVANGCGDTALHVAVGPNAPRDPMDEGHS---RGSTLASTSLSTLSTTSSPMVVG-TTTATTTFSGDRRASGEAQDAMALCDDE------GRGPTTQVVTALLRRGADPSKKNRLGQTAAMCAVLAGRAGALREIRKAVLLGHSSSKGKEQEELSDLGHMAIREGHVGCLRVLTESCSEQEVLAWTDEEGVPALALAVARGQRECIDILLKGVSPTTSCGGDXXXXXXNTVLHVTAMARGGVPVLKRLMSPKGGGEPFDLGWLEYRNGLGDTVLMAALRAGRHSAALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSCVLGRTADERARLCSKIAPKPTRPGEQSQGSHANPLSSAGASAAAAHR 1675
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A6H5KLN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN4_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 1.510e-147 Identity = 357/727 (49.11%), Postives = 407/727 (55.98%), Query Frame = 1 Query: 3106 MAIRGEAPTVLLLAAETDSEWTCSSARSGGAGRGNTSLNTSS-------GGDXXXXXXXXXXXXXTKTGDRSGGSSDDVSSRGEKDGDGDRGXXXPARPXXXXXXXXXASLNIVADADAGAERAAADTRPIGGAAGGEAGGCAPAPSAVRSPLPLSSFAAPSLADTEELRDHRRHQRASTNPSRGGRAASTVQVESGRDGTGSRKSMVDDQSAL----NGANGTGEADDDSNGIISGGCGASADNAGL---GESEEEDEVSGWGGLLDVGVRCAGSGNCPLHEAAASGSVGAVLSLLDLGADASIVNGCGDTALHMAVGPEAPRDYDDEGRQCFRSAFAFASTSTSTPATSCPPWHIHPDLTSCKQASIDQRESRRTRRPCFLVSSRYFSRLFAHFPMYQVVTALLRRGADPTMKDGLGRTAAMCAVMVGRAGALRELRKAARLWPPRSKDREQQELSGLGRVAISEGHVACLRVITDGCSEQ-----------------------------------------------------DVLSWVDEEGVPALGLAVTHGRRECIDILLKGASPTSACGS---RDDGNTVLHVTAMTRGGVPVLKRLMSSKGGGEPFDLGWLEWRNGSGDTVLMAALRAGRHAAALLLLQALAVPTAAAHTFRYAWVIAAALSFAELCPCPSCVLGRTAEERARLCSKVVSKPARPGELRAGASINSPSNAGASTAAKRR 5076
MA RGEAPTVLLLA E DSEWT S+ G G GN SL+T S G XXXXXXXXXXXXX + SS V G GD G AR VAD AG A + A A PAPS+VRSPLPLS+FAAPSLADTEELRD R H TN + V +++GR G+ S + V + +L + + TG+ + G G D++G E EE D+ SGWGGLL+V VRC+GSGNCPLHEAAASG VGAVLSLLDLGAD S+ NGCGDTALH+AVGP APRD DEG ASTS ST +T+ + T+ S D R S + L G PT + R G L RKA SK +E +ELS LG +AI EGHVACLRV+T+ CSEQ +VL+W DEEGVPAL LAV G+ ECIDILLKGASPT+ CG GNTVLHVTAM RGGVPVLKRLMS KGGGEPFD+GWLE+RNG GDTVLMAALRAGRH+AALLLL+ALAVPTAAAHTFRYAWVIAAAL +ELCPCPSCVLGRTA+ERARLCSK+ KP RPGE G+ N S+AGAS +A R
Sbjct: 1 MAARGEAPTVLLLATEADSEWTNGSSGGAGTGSGNASLDTRSDYASSAPGAGXXXXXXXXXXXXXXXXXXXTAASSVFVDDHAGGVG-GDNG----AREGSRSSIPVSGGDTGVADGKAG--DGAKKMSNVAAVASAAAAPDMPAPSSVRSPLPLSAFAAPSLADTEELRDLRHHHHDVTNAAGKAERPEGVAIDTGRAGSTSTSTNVSSRISLARKASSSGDTGDTERSGGNHSDYGGGDHDDSSGRKVRSEGEEGDDPSGWGGLLEVNVRCSGSGNCPLHEAAASGKVGAVLSLLDLGADVSVANGCGDTALHVAVGPNAPRDPMDEGHLW---GSTLASTSLSTLSTTSSSMIVG-TTTATATISGDSRGSGEAQDAMALCDD---------------------EGRGPTTQ--------------ARKGRLDIYRKATLALRKSSKGKEHEELSDLGHIAIREGHVACLRVLTESCSEQLPVVSGFLFTFCDYSAVLHETCTISFNIATNTXXXXXXXXXXXXXXXXXXNDKEVLAWTDEEGVPALALAVARGQHECIDILLKGASPTTPCGGDGGSGGGNTVLHVTAMARGGVPVLKRLMSPKGGGEPFDVGWLEYRNGLGDTVLMAALRAGRHSAALLLLKALAVPTAAAHTFRYAWVIAAALRLSELCPCPSCVLGRTADERARLCSKIAPKPTRPGEQPQGSHANPLSSAGASASAAHR 681
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A6H5KKE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE4_9PHAE) HSP 1 Score: 226 bits (575), Expect = 6.640e-62 Identity = 137/250 (54.80%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 1450 GNASQVDALYYGQGLGGVIFDCLNTRDAEGNSLLAAVAGGAGPVSLVRVVLKWGADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLKDGRQGKSLLHEAAALGLHHLTAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPVVKNDKGQVPAVVAMLHGHTSTAKTLFKAFSASKTAPKRSRAIDTMAAIAHAAAMTY 2199
GNAS+VDALYYGQGLGGVIFDCLNT+D EGNSLLA VA G GP++L+RVVLKWGADVNSVN R +V P I D D D +N + C R ELARLLTSR+ + N+ G AGG TP+HLAAAGGWE CATNLLEN+ASP VKN+KGQVPAVVAMLHGH ST K L +AFSA+KTA KRSR ID AA+A A+ +T+
Sbjct: 128 GNASRVDALYYGQGLGGVIFDCLNTKDPEGNSLLAKVASGVGPIALIRVVLKWGADVNSVNIR-------------TSLVTTDHQSPTIHYDD------------------------------DDYDDDND-----HRCR--RDELARLLTSRSGTMVNV--GDAGGVTPIHLAAAGGWEKCATNLLENNASPAVKNNKGQVPAVVAMLHGHASTGKKLLQAFSAAKTASKRSRTIDAFAAVAMASGVTH 325
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A6H5KJ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ72_9PHAE) HSP 1 Score: 192 bits (489), Expect = 5.290e-52 Identity = 121/251 (48.21%), Postives = 148/251 (58.96%), Query Frame = 1 Query: 1 AMTMSVVEDGRWANSDIFHEPTDPDMVEYLGRKRESLQNQVVNVAGGMSIGPALYLWTHRLTNADVVSVVTTARPFTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRRSPFDGSLGGIKGGPVP-NHRTSDKWTMLPLSEETGT--GLMALKGGRADSELRKLRKEKRLRAPLQLPLFTSPLEADRTGNGKVHNRMSQCLVAERDRFMELLSKERQDRVHLEAFACSLVQAAYRGYLLRKR 744
AM+ S E+G W +SDIF EPTDP+M+ YLGRKRESLQN+ G +G A+Y RL ++ A F T GG P + R S KWT+LP ++E G MA+KGG+ D++LR+LR EK LRAPL LPLFTSPLE D TG+GKVH+RMS+CL+AER+RFMELL KERQ+R+HLEAFACSLVQAA+RGYLLRKR
Sbjct: 12 AMSASAGEEGPWGHSDIFREPTDPEMIAYLGRKRESLQNKAAQ--SGRVLG-AVY---RRLEALPMIQAE--ALGFQRTG-------------------------------------------------GGKTPLSRRASGKWTILPKNKEASGEGGFMAVKGGKTDAKLRRLRNEKNLRAPLHLPLFTSPLEVDPTGSGKVHDRMSECLMAERERFMELLGKERQERIHLEAFACSLVQAAFRGYLLRKR 205
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A1F4M4S5_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium RIFOXYD12_FULL_59_19 TaxID=1797574 RepID=A0A1F4M4S5_9BURK) HSP 1 Score: 72.4 bits (176), Expect = 3.740e-10 Identity = 57/178 (32.02%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 1588 VRVVLKWGADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLK-DGRQGKSLLHEAAALGLHHLTAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPVVKNDKGQVPAVVAMLHGHTSTAKTLFKAF 2118
V +L G D N+ + G S L LAM + + V++L NHP I+++ +S L AA G L ++ G DV+ + GW P+HYA +G E+ LL ID TPL +AA G + LLE A P+++ND G + A+ G+ + + +L AF
Sbjct: 47 VSALLNRGFDPNTSDPAGVSGLMLAMKESAFQAVNVLLNHPQIKVEVRNATDESPLMLAALKGEIALCQLMIRLGADVN----KPGWAPLHYAATHGHLEVLNLLLEEN---AYIDAASPNNTTPLMMAAHYGTPSAVKLLLEAGADPMLRNDLG-LSAIDFAHRGNRANSASLIAAF 216
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A485K947_9STRA (Aste57867_1995 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K947_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 6.840e-10 Identity = 67/205 (32.68%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 1516 LNTRDAEGNSLL--AAVAGGAGPVSLVRVVLKWGADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLKD--GRQGKSLLHEAAALGLHHL-TAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPV-VKNDKGQVPAVVAMLHGHTSTAKTLFK 2112
+N D G S L A + G V+ + + + G D+N+ + + L LA K +E+V LLF PDI + G G+S LH A G + T L G D++A D E TP+ A GR E+ +LL R D + +I+LGG GG + LH A G E+ T LL S + K+++ P ++A G + L +
Sbjct: 427 INLGDNLGRSALHQACMEGHESVVTFL--LAQSGCDINAKDGELSTPLMLAAWKGRLEIVQLLFERPDIHDINLGGNFGRSALHRACMEGHESVVTFLLAQSGCDINAKDGELN-TPLMLAAWKGRLEIVQLLLERPD-IHDINLGGNGGRSALHQACMEGHESVVTFLLAQSGCDINAKDEELYTPLLLAAWKGRLEIVQLLLE 627
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A6A4XWH4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XWH4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.500e-10 Identity = 59/172 (34.30%), Postives = 84/172 (48.84%), Query Frame = 1 Query: 1609 GADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLKD--GRQGKSLLHEAAALGLHHL-TAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPV-VKNDKGQVPAVVAMLHGHTSTAKTLFK 2112
G D+N+ + + L LA K +E+V LLF PD+ + G G S LH A G + T L G D++A D E TP+ A GR E+ +LL R D L +I+LGG G + LH A G E+ T LL S + K+ + P ++A G + LF+
Sbjct: 16 GCDINAKDGELSTPLMLAAWKGRLEIVQLLFERPDLHDINLGGNLGMSALHLACMEGHESVVTFLLAQSGCDINAKDGELN-TPLMLAARKGRLEIVQLLLERPD-LHDINLGGNLGRSALHRACMEGHESVVTFLLAQSGCDINAKDGELSTPLMLAAWKGRLEIVQLLFE 185
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A835ZIR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 3.420e-8 Identity = 49/150 (32.67%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 508 LRKEKRLRAPLQLPLFTSPLEADRTGNGKVHNRMSQCLVAERDRFMELLSKERQDRVHLEAFACSLVQAAYRGYLLRKRWAEVDARQRVQLRVRKSLREFLKSKGAPFALGAVEKQQTEDRLRRTAACTIQGYFRCFLARQTLGKRRMAS 957
LR+ ++L AP L SPLE R++ L+AE FM L ++R +R LE + + +QAA RGYLLRK W V + +VR LR + + L A E + R AA +Q +R A + + +RR A+
Sbjct: 95 LRRHRQL-APFASTLSRSPLEPTADAEAVERERLNAALLAEHREFMAKLKEKRHERAMLETYGAARIQAASRGYLLRKHWFAVKQSLLERQQVRAELRAIIAAAAPHLVLTAAEARARNASRRAAAAACLQRAYRVHAACRAVSRRRAAA 243
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: A0A6A4YXA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YXA2_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.270e-7 Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 1609 GADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPDIRLKD--GRQGKSLLHEAAALGLHHL-TAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGG 1941
G D+N+ + + L LA K +E+V LLF PDI + G G+S LH+A G + T L G D++A D N TP+ A GR E+ +LL R D L +I+LGG
Sbjct: 26 GCDINAKDENRNTPLMLAAWKGRLEIVQLLFERPDIHDINLGGNGGRSALHQACMEGHESVVTFLLAQSGCDINAKD-RNRNTPLMLAARKGRLEIVQLLLERPD-LHDINLGG 137
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Match: NFKB1_CHICK (Nuclear factor NF-kappa-B p105 subunit n=16 Tax=Phasianidae TaxID=9005 RepID=NFKB1_CHICK) HSP 1 Score: 68.2 bits (165), Expect = 1.550e-7 Identity = 51/156 (32.69%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 1585 LVRVVLKWGADVNSVNRRGESALRLAMSKRNVEVVDLLFNHPD----IRLKDGRQGKSLLHEAAALGLHHLTAQLVSKGLDVDAVDPENGWTPVHYACHNGRYELARLLTSRADALTNIDLGGAGGATPLHLAAAGGWETCATNLLENSASPVVKN 2040
+V +LK GA+VN ++R G S L LA ++ + +++ LL H I L +G +G S +H L++ G+DV+A + ++G T +H A LA L DA ++D G TPLH+AA G+ A L A P V+N
Sbjct: 595 VVEDLLKAGANVNLLDRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLSNG-EGLSAIHMVVTANSLSCLKLLIAAGVDVNAQEQKSGRTALHLAVEQENVPLAGCLLLEGDA--DVDSTTYDGTTPLHIAAGRGFTKLAAVLKAAGADPHVEN 747 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17031.1 >prot_C-linearis_contig96.17031.1 ID=prot_C-linearis_contig96.17031.1|Name=mRNA_C-linearis_contig96.17031.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1691bp MTMSVVEDGRWANSDIFHEPTDPDMVEYLGRKRESLQNQVVNVAGGMSIGback to top mRNA from alignment at C-linearis_contig96:177241..192846- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig96.17031.1 ID=mRNA_C-linearis_contig96.17031.1|Name=mRNA_C-linearis_contig96.17031.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15606bp|location=Sequence derived from alignment at C-linearis_contig96:177241..192846- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig96:177241..192846- >mRNA_C-linearis_contig96.17031.1 ID=mRNA_C-linearis_contig96.17031.1|Name=mRNA_C-linearis_contig96.17031.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=10146bp|location=Sequence derived from alignment at C-linearis_contig96:177241..192846- (Chordaria linearis ClinC8C monoicous)back to top |