Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 969 |
| Cds size | 969 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.8782444-CDS-C-linearis_contig96:173038..173890 | 1622930818.8782444-CDS-C-linearis_contig96:173038..173890 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 173039..173890 - |
| 1690881265.983776-CDS-C-linearis_contig96:173038..173890 | 1690881265.983776-CDS-C-linearis_contig96:173038..173890 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 173039..173890 - |
| 1622930818.8926992-CDS-C-linearis_contig96:174246..174363 | 1622930818.8926992-CDS-C-linearis_contig96:174246..174363 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 174247..174363 - |
| 1690881265.9986491-CDS-C-linearis_contig96:174246..174363 | 1690881265.9986491-CDS-C-linearis_contig96:174246..174363 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 174247..174363 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17030.1 >prot_C-linearis_contig96.17030.1 ID=prot_C-linearis_contig96.17030.1|Name=mRNA_C-linearis_contig96.17030.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bp
GNYPGRDPESPPPESFASGGGGGRKKRTPAPWGGLFKGKEDVALPTAPWS
AGSPQDGRYEEPPTPQGQYPQWQSQQFARASAAAGTAASGGGYSSIASAR
GGYGSPPPPLSGYGSSSPRPPPPPPPPPPSRRRTSPLVANAPRLTVIPAP
AKPSPVQTATTGLQQQQQQQQRGPSPRGGGAGLSKWGSWGISRGGAEAKS
NSGRSSSRKLASEPVAEKTGLLSSAARPEAVVFGGVRAGGGGGSSLPGSF
SREQSAPGGRITGGEGGEGGGARRERGSLPRSGEGFAAAGKPSPFLAARS
SLASSGKRSATRRSPLEQSAVNP back to topmRNA from alignment at C-linearis_contig96:173039..174363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17030.1 ID=mRNA_C-linearis_contig96.17030.1|Name=mRNA_C-linearis_contig96.17030.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1325bp|location=Sequence derived from alignment at C-linearis_contig96:173039..174363- (Chordaria linearis ClinC8C monoicous)
GGCAACTACCCGGGCCGAGATCCGGAGTCGCCGCCGCCGGAAAGTTTTGC
TAGTGGCGGGGGAGGGGGGCGGAAAAAGCGAACACCAGCTCCGTGGGGGG
GTCTGTTCAAGGGAAAGGTGAGGGGGCAATCAGAATGAGATCACGCTTTC
GCTCCCAGTCGTGTGTTTCCGAGGAATGTTGGTAAGTCGTTCGTCGGTTG
TGCTTGTGTCCACCGTGCGTTAGTGGGACATTGCGTATTGACAAGAAAGA
ACGTTGTAACACTGCTGTTGGGCTGCGACGCGTGGCATAGGAGTGTGATG
CATTTCCCACGGCTACATAGAAAATCAAGGTTTCTTGTAGCGATACAAGT
ACAATGGCATGCCCACCTCGGTGAAGGCATGTTCCGAAGAGCGCACGATG
GTCGTACTCCCGTCAACACTCGTACGAGGCCCTAAATCGCACAACAACCC
TCCCCTTGCTACCCGCCCAACAGGAGGACGTAGCGCTACCGACGGCGCCC
TGGTCGGCGGGATCTCCGCAAGACGGAAGGTACGAGGAGCCACCGACCCC
ACAAGGCCAGTACCCGCAGTGGCAAAGCCAGCAATTCGCCCGGGCTTCAG
CAGCAGCAGGAACAGCAGCCAGCGGCGGCGGCTACTCCAGCATTGCTTCG
GCGAGGGGTGGATACGGATCACCGCCACCACCGCTATCGGGGTACGGATC
ATCGTCACCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCGAGAC
GGCGCACGTCGCCGCTGGTTGCAAACGCTCCTCGCCTGACCGTCATCCCG
GCACCGGCGAAGCCTTCACCTGTCCAGACAGCAACGACAGGGTTGCAGCA
GCAGCAGCAGCAGCAGCAGCGAGGGCCGTCGCCTAGGGGAGGAGGGGCAG
GACTATCGAAGTGGGGGTCGTGGGGCATCAGCCGCGGTGGTGCCGAAGCC
AAGAGTAACAGCGGCAGGAGCAGCAGTAGGAAGCTGGCCTCGGAGCCGGT
GGCAGAGAAGACGGGTCTACTATCTTCGGCCGCGCGGCCCGAAGCGGTGG
TTTTCGGCGGTGTTAGGGCCGGCGGCGGCGGTGGAAGTTCCCTGCCCGGC
TCTTTCTCGCGAGAACAATCAGCACCGGGAGGTAGAATCACCGGAGGCGA
AGGAGGCGAAGGAGGAGGAGCAAGAAGAGAGAGAGGAAGCCTTCCGAGGA
GCGGCGAAGGCTTTGCGGCGGCCGGAAAGCCCTCCCCGTTCCTCGCGGCT
CGCTCCTCCCTGGCCTCCTCCGGCAAGCGGAGCGCGACGCGCAGATCTCC
GCTCGAGCAGAGCGCGGTCAACCCG back to topCoding sequence (CDS) from alignment at C-linearis_contig96:173039..174363- >mRNA_C-linearis_contig96.17030.1 ID=mRNA_C-linearis_contig96.17030.1|Name=mRNA_C-linearis_contig96.17030.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at C-linearis_contig96:173039..174363- (Chordaria linearis ClinC8C monoicous)
GGCAACTACCCGGGCCGAGATCCGGAGTCGCCGCCGCCGGAAAGTTTTGC
TAGTGGCGGGGGAGGGGGGCGGAAAAAGCGAACACCAGCTCCGTGGGGGG
GTCTGTTCAAGGGAAAGGGCAACTACCCGGGCCGAGATCCGGAGTCGCCG
CCGCCGGAAAGTTTTGCTAGTGGCGGGGGAGGGGGGCGGAAAAAGCGAAC
ACCAGCTCCGTGGGGGGGTCTGTTCAAGGGAAAGGAGGACGTAGCGCTAC
CGACGGCGCCCTGGTCGGCGGGATCTCCGCAAGACGGAAGGTACGAGGAG
CCACCGACCCCACAAGGCCAGTACCCGCAGTGGCAAAGCCAGCAATTCGC
CCGGGCTTCAGCAGCAGCAGGAACAGCAGCCAGCGGCGGCGGCTACTCCA
GCATTGCTTCGGCGAGGGGTGGATACGGATCACCGCCACCACCGCTATCG
GGGTACGGATCATCGTCACCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCC
GCCGTCGAGACGGCGCACGTCGCCGCTGGTTGCAAACGCTCCTCGCCTGA
CCGTCATCCCGGCACCGGCGAAGCCTTCACCTGTCCAGACAGCAACGACA
GGGTTGCAGCAGCAGCAGCAGCAGCAGCAGCGAGGGCCGTCGCCTAGGGG
AGGAGGGGCAGGACTATCGAAGTGGGGGTCGTGGGGCATCAGCCGCGGTG
GTGCCGAAGCCAAGAGTAACAGCGGCAGGAGCAGCAGTAGGAAGCTGGCC
TCGGAGCCGGTGGCAGAGAAGACGGGTCTACTATCTTCGGCCGCGCGGCC
CGAAGCGGTGGTTTTCGGCGGTGTTAGGGCCGGCGGCGGCGGTGGAAGTT
CCCTGCCCGGCTCTTTCTCGCGAGAACAATCAGCACCGGGAGGTAGAATC
ACCGGAGGCGAAGGAGGCGAAGGAGGAGGAGCAAGAAGAGAGAGAGGAAG
CCTTCCGAGGAGCGGCGAAGGCTTTGCGGCGGCCGGAAAGCCCTCCCCGT
TCCTCGCGGCTCGCTCCTCCCTGGCCTCCTCCGGCAAGCGGAGCGCGACG
CGCAGATCTCCGCTCGAGCAGAGCGCGGTCAACCCGGAGGACGTAGCGCT
ACCGACGGCGCCCTGGTCGGCGGGATCTCCGCAAGACGGAAGGTACGAGG
AGCCACCGACCCCACAAGGCCAGTACCCGCAGTGGCAAAGCCAGCAATTC
GCCCGGGCTTCAGCAGCAGCAGGAACAGCAGCCAGCGGCGGCGGCTACTC
CAGCATTGCTTCGGCGAGGGGTGGATACGGATCACCGCCACCACCGCTAT
CGGGGTACGGATCATCGTCACCGCGGCCGCCGCCGCCGCCGCCGCCGCCG
CCGCCGTCGAGACGGCGCACGTCGCCGCTGGTTGCAAACGCTCCTCGCCT
GACCGTCATCCCGGCACCGGCGAAGCCTTCACCTGTCCAGACAGCAACGA
CAGGGTTGCAGCAGCAGCAGCAGCAGCAGCAGCGAGGGCCGTCGCCTAGG
GGAGGAGGGGCAGGACTATCGAAGTGGGGGTCGTGGGGCATCAGCCGCGG
TGGTGCCGAAGCCAAGAGTAACAGCGGCAGGAGCAGCAGTAGGAAGCTGG
CCTCGGAGCCGGTGGCAGAGAAGACGGGTCTACTATCTTCGGCCGCGCGG
CCCGAAGCGGTGGTTTTCGGCGGTGTTAGGGCCGGCGGCGGCGGTGGAAG
TTCCCTGCCCGGCTCTTTCTCGCGAGAACAATCAGCACCGGGAGGTAGAA
TCACCGGAGGCGAAGGAGGCGAAGGAGGAGGAGCAAGAAGAGAGAGAGGA
AGCCTTCCGAGGAGCGGCGAAGGCTTTGCGGCGGCCGGAAAGCCCTCCCC
GTTCCTCGCGGCTCGCTCCTCCCTGGCCTCCTCCGGCAAGCGGAGCGCGA
CGCGCAGATCTCCGCTCGAGCAGAGCGCGGTCAACCCG back to top
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