Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 979 |
| Cds size | 978 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.5834749-CDS-C-linearis_contig96:126256..126342 | 1622930818.5834749-CDS-C-linearis_contig96:126256..126342 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 126257..126342 - |
| 1690881265.876245-CDS-C-linearis_contig96:126256..126342 | 1690881265.876245-CDS-C-linearis_contig96:126256..126342 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 126257..126342 - |
| 1622930818.6060915-CDS-C-linearis_contig96:126840..126933 | 1622930818.6060915-CDS-C-linearis_contig96:126840..126933 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 126841..126933 - |
| 1690881265.8945684-CDS-C-linearis_contig96:126840..126933 | 1690881265.8945684-CDS-C-linearis_contig96:126840..126933 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 126841..126933 - |
| 1622930818.6305969-CDS-C-linearis_contig96:127137..127173 | 1622930818.6305969-CDS-C-linearis_contig96:127137..127173 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 127138..127173 - |
| 1690881265.907637-CDS-C-linearis_contig96:127137..127173 | 1690881265.907637-CDS-C-linearis_contig96:127137..127173 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 127138..127173 - |
| 1622930818.6505425-CDS-C-linearis_contig96:127651..128414 | 1622930818.6505425-CDS-C-linearis_contig96:127651..128414 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 127652..128414 - |
| 1690881265.9221048-CDS-C-linearis_contig96:127651..128414 | 1690881265.9221048-CDS-C-linearis_contig96:127651..128414 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 127652..128414 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17024.1 >prot_C-linearis_contig96.17024.1 ID=prot_C-linearis_contig96.17024.1|Name=mRNA_C-linearis_contig96.17024.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp
GGNADVLEIIVGECNNGTRNFFEHDVHTRKVHNALRAAVPLTSTDRPLVQ
KNRNNGGCEQTVNATGGHNCRMNKEYPAEQVEAAREIENAMFDKIAQDFP
GARVAVVHEFGDYRAGTHKKDGVPVVTREVLKGGLLVFRARGPHLCQIPG
SPASLRGNAEARLALRAHAARELRRHENSTYNDDDIGKAMLDVLEILATG
EEESTEYRASLKPEKTSDLVLTVGILRWEPLETIMTGVKEFGELYGGRGY
TSESGRNGDKKKKAQGANSCNIADCPCKGADKCTCVGHTHVSNASAGGSI
GAAPGLNGVGKPFNSGDGAAARDFSS back to topmRNA from alignment at C-linearis_contig96:126257..128414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17024.1 ID=mRNA_C-linearis_contig96.17024.1|Name=mRNA_C-linearis_contig96.17024.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2158bp|location=Sequence derived from alignment at C-linearis_contig96:126257..128414- (Chordaria linearis ClinC8C monoicous)
GGCGGGAACGCGGACGTGTTAGAGATCATTGTTGGGGAGTGCAACAACGG
GACCAGGAATTTCTTTGAGCACGATGTCCACACCAGAAAGGTACACAACG
CGCTGCGGGCTGCTGTGCCGCTCACGTCCACCGACCGCCCTCTTGTCCAG
AAGAATAGAAACAACGGCGGATGCGAGCAAACAGTCAACGCGACAGGGGG
TCACAACTGCCGCATGAACAAGGAGTATCCCGCCGAGCAGGTGGAGGCAG
CTCGTGAGATCGAAAACGCTATGTTCGACAAGATCGCGCAAGACTTCCCG
GGCGCTCGGGTTGCGGTGGTACATGAGTTCGGCGATTACCGCGCCGGGAC
GCACAAGAAGGATGGGGTGCCCGTGGTGACCCGGGAGGTGTTGAAGGGCG
GCTTGTTGGTGTTCCGCGCTAGGGGCCCGCACCTCTGTCAGATACCGGGT
AGCCCCGCCTCTCTTCGGGGCAACGCCGAGGCCCGTTTGGCGTTGAGGGC
GCACGCCGCGCGAGAACTCAGGCGCCACGAAAACAGCACCTACAACGACG
ACGACATAGGGAAGGCCATGCTGGATGTGCTTGAGATCCTCGCGACTGGC
GAGGAAGAGTCCACGGAGTACCGGGCGAGCTTGAAGCCAGAAAAGACCAG
CGATCTGGTGCTGACGGTGGGAATCCTGAGGTGGGAGCCTCTGGAAACGA
TCATGACCGGTGTGAAGGAGTTCGGAGAGCTCTACGGGGGGCGTGGATAC
ACCAGCGAGAGCGGTAAGAGAGACCCGTTGTCGATCAGCATCTGTTCTAA
TCAGCGGTGGTTGTTGGCTGTTGTTTTAGTTGTTGGCTGCTGTTGTTTTA
GTTGTTGCTGTTGTTGGATGCTGTTGTTGTTGTTGTTGTCGTTGTTGTTG
TTGTTGTTGTTTTGAATTGTTGAATGATGGATGAATGGATGAATGAACGA
ATTAATTTGTGCTTGTGCGTTGTCATGTCTGATTATCCCTTCGTCCCATG
TGCACCCGACCTTCCGATTGTGCCCCTCAATGGGGGTGTTCTCGGCATGA
CCGTAGCTTCTAGGTCAAAAAGCATGGTTTCACTGAACGCTGACTTGTTC
GCGTCGGTTTTCGTGCGATCAATCCAGGCCAGGAGGCATCAAGCCTACCA
TGCTCACAACGATTGAATGACGCCAATATTCCCCCGCGTGTGCTCATCAT
TTTTCATTGTTCTTGTGCGGTTCATCTACTGCTCCATGCAGGCCGGAACG
GGGACAAGAAGAAGAAGGCACAAGGAGGTGGGGCCTGATTCGTTGTTGTT
GTTGTTGTTTCCGTCCTCTGTGACCGTTCCATGCCGACCCACCCCCGTGT
TCCCTCGTGTGCACACGACGCAACCACCTCATCCCCGCGCTGCTCCATGC
AATGCATTTGGCTGCATAATATTTCATTGAACTCCTTACGGCCGCTCTTG
GTCTCGCACTCGACATGATGATTCGTTTCAGCAAACTCCTGCAACATCGC
CGACTGCCCGTGCAAGGGTGCCGACAAGTGCACCTGCGTGGGCCACACCC
ACGTCTCCAACGCCTCAGCCGGCGGTAAGATTGATTGTGTACAGATTGTT
TTTGTTTGTTGGATGGTGTGCCCCGCACCCCACGTACCCACGGCACCCCC
GTTTCCTTCTCCATTGAATGTGTTGATACCGTTGCGTGCAATGGACCCTG
TGAATGAAATTTCGTATCCTTTCCTATGGGTCGAAGCGTCAATTTTGTTG
AGGCGGGTGAGCCATGGCCTCGGCAAGTAGCTGGGTTGACATGCTTTATA
TCAACACGTTCCGCCTGGGCTCAACACCACCCCCATTTCCCATCTCGGCT
GTTGGATCTAAATGATTTTTCAGCCAAGGCTTCGATAGGCACCACCTTAC
AGTCTGTTTTTGCCTTGTAGTCTAGTTATTTCCCATCCGAAATATACCAT
AACCTGTCCAAATTGCGCTTGACGCGGACAACAAGGTGGACCCTTGGCAG
CTCTGTTGCATGTGGATCACCAGATATCACGATACTCCAGACCTCACGTC
GGTTACCCGTCCTGTTCATCAGGTAGTATCGGTGCTGCTCCCGGCCTCAA
TGGAGTCGGCAAACCGTTCAACAGCGGCGACGGGGCCGCCGCGAGGGACT
TCAGCTCC back to topCoding sequence (CDS) from alignment at C-linearis_contig96:126257..128414- >mRNA_C-linearis_contig96.17024.1 ID=mRNA_C-linearis_contig96.17024.1|Name=mRNA_C-linearis_contig96.17024.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at C-linearis_contig96:126257..128414- (Chordaria linearis ClinC8C monoicous)
GGCGGGAACGCGGACGTGTTAGAGATCATTGTTGGGGAGTGCAACAACGG
GACCAGGAATTTCTTTGAGCACGATGTCCACACCAGAAAGGTACACAACG
CGCTGCGGGCTGCTGTGCCGCTCACGTCCACCGACCGCCCTCTTGTCCAG
AAGAATAGAAACAACGGCGGATGCGAGCAAACAGTCAACGCGACAGGGGG
TCACAACTGCCGCATGAACAAGGAGTATCCCGCCGAGCAGGTGGAGGCAG
CTCGTGAGATCGAAAACGCTATGTTCGACAAGATCGCGCAAGACTTCCCG
GGCGCTCGGGTTGCGGTGGTACATGAGTTCGGCGATTACCGCGCCGGGAC
GCACAAGAAGGATGGGGTGCCCGTGGTGACCCGGGAGGTGTTGAAGGGCG
GCTTGTTGGTGTTCCGCGCTAGGGGCCCGCACCTCTGTCAGATACCGGGT
AGCCCCGCCTCTCTTCGGGGCAACGCCGAGGCCCGTTTGGCGTTGAGGGC
GCACGCCGCGCGAGAACTCAGGCGCCACGAAAACAGCACCTACAACGACG
ACGACATAGGGAAGGCCATGCTGGATGTGCTTGAGATCCTCGCGACTGGC
GAGGAAGAGTCCACGGAGTACCGGGCGAGCTTGAAGCCAGAAAAGACCAG
CGATCTGGTGCTGACGGTGGGAATCCTGAGGTGGGAGCCTCTGGAAACGA
TCATGACCGGTGTGAAGGAGTTCGGAGAGCTCTACGGGGGGCGTGGATAC
ACCAGCGAGAGCGGGCGGGAACGCGGACGTGTTAGAGATCATTGTTGGGG
AGTGCAACAACGGGACCAGGAATTTCTTTGAGCACGATGTCCACACCAGA
AAGGTACACAACGCGCTGCGGGCTGCTGTGCCGCTCACGTCCACCGACCG
CCCTCTTGTCCAGAAGAATAGAAACAACGGCGGATGCGAGCAAACAGTCA
ACGCGACAGGGGGTCACAACTGCCGCATGAACAAGGAGTATCCCGCCGAG
CAGGTGGAGGCAGCTCGTGAGATCGAAAACGCTATGTTCGACAAGATCGC
GCAAGACTTCCCGGGCGCTCGGGTTGCGGTGGTACATGAGTTCGGCGATT
ACCGCGCCGGGACGCACAAGAAGGATGGGGTGCCCGTGGTGACCCGGGAG
GTGTTGAAGGGCGGCTTGTTGGTGTTCCGCGCTAGGGGCCCGCACCTCTG
TCAGATACCGGGTAGCCCCGCCTCTCTTCGGGGCAACGCCGAGGCCCGTT
TGGCGTTGAGGGCGCACGCCGCGCGAGAACTCAGGCGCCACGAAAACAGC
ACCTACAACGACGACGACATAGGGAAGGCCATGCTGGATGTGCTTGAGAT
CCTCGCGACTGGCGAGGAAGAGTCCACGGAGTACCGGGCGAGCTTGAAGC
CAGAAAAGACCAGCGATCTGGTGCTGACGGTGGGAATCCTGAGGTGGGAG
CCTCTGGAAACGATCATGACCGGTGTGAAGGAGTTCGGAGAGCTCTACGG
GGGGCGTGGATACACCAGCGAGAGCGGCCGGAACGGGGACAAGAAGAAGA
AGGCACAAGGAGGCCGGAACGGGGACAAGAAGAAGAAGGCACAAGGAGCA
AACTCCTGCAACATCGCCGACTGCCCGTGCAAGGGTGCCGACAAGTGCAC
CTGCGTGGGCCACACCCACGTCTCCAACGCCTCAGCCGGCGCAAACTCCT
GCAACATCGCCGACTGCCCGTGCAAGGGTGCCGACAAGTGCACCTGCGTG
GGCCACACCCACGTCTCCAACGCCTCAGCCGGCGGTAGTATCGGTGCTGC
TCCCGGCCTCAATGGAGTCGGCAAACCGTTCAACAGCGGCGACGGGGCCG
CCGCGAGGGACTTCAGCTCCGTAGTATCGGTGCTGCTCCCGGCCTCAATG
GAGTCGGCAAACCGTTCAACAGCGGCGACGGGGCCGCCGCGAGGGACTTC
AGCTCC back to top
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